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Properties
Property Name | Value |
Product | Leucine-rich repeat, ribonuclease inhibitor subtype |
Orig transcript id | gnl|cribi|Naga_100691g2.2998.mrna |
Orig protein id | gnl|cribi|Naga_100691g2.2998 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:181371..182634 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4722 ID=rna4722|Name=rna4722|organism=Nannochloropsis gaditana|type=mRNA|length=873bp ATCAACCAACGCACTTTCGCACCTCTTATTAACCATACGTGTATCCGTAG ATGCATTTAATGCCCGGTAAGCGTGGCATCGGCAGCCGCCACCGCAACGA CAGCCGTTGTCGGCATCGCTTTTGCCTTCAAAAGGACCTTCCTGGCTCCA TCCTCCTCCTTCACCTCCTCTTGTGCCTCACCACCACCTCATTGCCCATG CTCGTTCACGCCTTCCCCTTCCATCCTGCGTCTGCTTCACGTCTTTTCCA GCGAGCAACCTTACGGGCGCGGTACTGGGCGCCTTGGTCCGCATCGACCC GTCCATTGACCCCAGCTTTTTCTTTTCCCCCTGGGGGTTACGCAGGACGA GGTGGGGCAAAAGGACGGGCAGGAGGCAACGACAAGGGAAAAGACGGGGG GAAAGGGGGAAGAGAAGGAGGATATGCCTATTCTGGACGAGCACCGAGGG GTGGTGGGCGGGAGGATGGACACGAGGCGGGAAACGGCGGACGCCGGGAG GGAGGAAGGTCTGAACGGGGGAGAGAGAAGGGGGGATATGAAGGGGGGAG AAACGCAGAGTTCGGAGGTCGAGGAGGAAGGGGAGGAGGAAGAGGAGGAG GGAAGGAGGCAAGCTGGGGCTCAGGCCGGGGCCAGAAGTGGGAGGGGGGA AAGAAGGAGGGGGTCCGGGGTGGGAGGTATCAGGAGAGGGATTGGCCGAA GGGGGGGGGGAGGGGGCGAGAAGGAAGGATGGAGGGAGGGGGACGGAAGG GAGGATATTCGTCCTCACTGGAATGGTCTTACGATGCCCCTGGTCCAGGG GATGGGGCAGGGGAGGAGGATTGGGAAGACGGCAGGGAGGGAGGGAGGGA GGGAGGGAGGGTAGGAGGAGGGA back to topprotein sequence of rna4722 >rna4722-protein ID=rna4722-protein|Name=rna4722|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp MAEVVPPPSFPPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTL DMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAF ASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYH VREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSY PLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGV GGLVSALQEDRDGIEGEGGVYLRVRRRRKRPDLNLAFNLLPWEKESYVHA MPPGVLFVTDRQSASLAEGPLAGLRKKDINTNTQDLLYRHGAQSISRKVS CKMTSQT back to topmRNA from alignment at CM002464.1:181371..182634+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4722 ID=rna4722|Name=rna4722|organism=Nannochloropsis gaditana|type=mRNA|length=1264bp|location=Sequence derived from alignment at CM002464.1:181371..182634+ (Nannochloropsis gaditana) aTGGCCGAagtcgtccctcccccttcctttcctccccgcttgCCTCGCCT
GCAGCACTTGCTCCTAGGGAACGTGTGGGCGTCCGCCATTGGGGCGGCGG
CATTGGCAGCTGCCTTTGCTTCTGGcgcttgcccctccctcctgaccctg
GACATGTCCTACAACGATTTACACAGGTGCGTGAGCAAAGATTTTCTTTG
GTTGTCGGGACGAAGGTGATGAACACTTAAGCAGGCCCTGGGAAGGGTAC
AGAAACGAGTCGATGTAAACTGATTTGCGTATTCATGTCTTACCTCTCAC
AGCGCCGGAGCTcaagccctcctctccgcctttgCATCCAGCGGCGCGTG
TGCCAAATTACAGAGGTTGAATCTGGCAGGTAACGGTCTGGGGGCACAGG
GGGCGTGGGAGATTGGGAGGGCCTTTGCCAGCGGGTGGGGCAAAGCGCTT
CGCGTGTTGTCCTTGGCGAGCAATGGTTTAGGGGCCGGGGGTGTGGAAGC
GCTCTTAGAAGctgcgagggggggcacagggagggagggagggagggagc
gtgaTCGTCCCTTTCGGTACTACCAtgtgcgggaggaaggcatgaatgtg
ggaggagggagaagggatcATCTGCGCCCAGACttcgcctcgtcgtcctA
TCTGGCAtcgacgtcctcctcctccgccttgccccccccccttcttgtcA
CGGTCCCTTCTGAGGCTTCCTCCTACCCTCTTCAGAGCCTCCAAATCCTA
AATCTCTTTCTCAATGGTGCCGGGGATGAAGGTGCGAGTGAAGTCGCGGC
GGCCTTAGCCCACgggttcctcccctccctccaatttTTGGACCTGGCTG
CCAATCGTATCACTCAAGAAGGGGTGGGTGGGCTCGTGAGTGCGTTGCAG
GAAGATCGGGATGGGattgagggggaaggaggggtataCCTCagagtgag
aaggaggaggaaaaggcctgATTTAAATTTAGCCTTCAACCTGCTTccct
gggagaaggaaagctaTGTACATGCGATGCCTCCGGGAGTGTTATTGTGA
GACAGAAAGCGGCGAAtacgggagggaaacagaGGTGAAAAGACATGGCT
AAAGGTAAAGTGTGACAGATAGGCAGAGCGCGAGCCTAGCAGAAGGTCCC
TTGGCCGGGCTACGTAAAAAAGACATCAATACCAATACTCAAGATTTATT
GTATCGGCATGGAGCTCAAAGTATCTCGCGCAAGGTGTCCTGTAAAATGA
CAAGTCAAACATAG back to topCoding sequence (CDS) from alignment at CM002464.1:181371..182634+ >rna4722 ID=rna4722|Name=rna4722|organism=Nannochloropsis gaditana|type=CDS|length=3222bp|location=Sequence derived from alignment at CM002464.1:181371..182634+ (Nannochloropsis gaditana) aTGGCCGAagtcgtccctcccccttcctttcctccccgcttgCCTCGCCT GCAGCACTTGCTCCTAGGGAACGTGTGGGCGTCCGCCATTGGGGCGGCGG CATTGGCAGCTGCCTTTGCTTCTGGcgcttgcccctccctcctgaccctg GACATGTCCTACAACGATTTACACAGCGCCGGAGCTcaagccctcctctc cgcctttgCATCCAGCGGCGCGTGTGCCAAATTACAGAGGTTGAATCTGG CAGGTAACGGTCTGGGGGCACAGGGGGCGTGGGAGATTGGGAGGGCCTTT GCCAGCGGGTGGGGCAAAGCGCTTCGCGTGTTGTCCTTGGCGAGCAATGG TTTAGGGGCCGGGGGTGTGGAAGCGCTCTTAGAAGctgcgagggggggca cagggagggagggagggagggagcgtgaTCGTCCCTTTCGGTACTACCAt gtgcgggaggaaggcatgaatgtgggaggagggagaagggatcATCTGCG CCCAGACttcgcctcgtcgtcctATCTGGCAtcgacgtcctcctcctccg ccttgccccccccccttcttgtcACGGTCCCTTCTGAGGCTTCCTCCTAC CCTCTTCAGAGCCTCCAAATCCTAAATCTCTTTCTCAATGGTGCCGGGGA TGAAGGTGCGAGTGAAGTCGCGGCGGCCTTAGCCCACgggttcctcccct ccctccaatttTTGGACCTGGCTGCCAATCGTATCACTCAAGAAGGGGTG GGTGGGCTCGTGAGTGCGTTGCAGGAAGATCGGGATGGGattgaggggga aggaggggtataCCTCagagtgagaaggaggaggaaaaggcctgATTTAA ATTTAGCCTTCAACCTGCTTccctgggagaaggaaagctaTGTACATGCG ATGCCTCCGGGAGTGTTATTTGTGACAGATAGGCAGAGCGCGAGCCTAGC AGAAGGTCCCTTGGCCGGGCTACGTAAAAAAGACATCAATACCAATACTC AAGATTTATTGTATCGGCATGGAGCTCAAAGTATCTCGCGCAAGGTGTCC TGTAAAATGACAAGTCAAACATAGaTGGCCGAagtcgtccctcccccttc ctttcctccccgcttgCCTCGCCTGCAGCACTTGCTCCTAGGGAACGTGT GGGCGTCCGCCATTGGGGCGGCGGCATTGGCAGCTGCCTTTGCTTCTGGc gcttgcccctccctcctgaccctgGACATGTCCTACAACGATTTACACAG CGCCGGAGCTcaagccctcctctccgcctttgCATCCAGCGGCGCGTGTG CCAAATTACAGAGGTTGAATCTGGCAGGTAACGGTCTGGGGGCACAGGGG GCGTGGGAGATTGGGAGGGCCTTTGCCAGCGGGTGGGGCAAAGCGCTTCG CGTGTTGTCCTTGGCGAGCAATGGTTTAGGGGCCGGGGGTGTGGAAGCGC TCTTAGAAGctgcgagggggggcacagggagggagggagggagggagcgt gaTCGTCCCTTTCGGTACTACCAtgtgcgggaggaaggcatgaatgtggg aggagggagaagggatcATCTGCGCCCAGACttcgcctcgtcgtcctATC TGGCAtcgacgtcctcctcctccgccttgccccccccccttcttgtcACG GTCCCTTCTGAGGCTTCCTCCTACCCTCTTCAGAGCCTCCAAATCCTAAA TCTCTTTCTCAATGGTGCCGGGGATGAAGGTGCGAGTGAAGTCGCGGCGG CCTTAGCCCACgggttcctcccctccctccaatttTTGGACCTGGCTGCC AATCGTATCACTCAAGAAGGGGTGGGTGGGCTCGTGAGTGCGTTGCAGGA AGATCGGGATGGGattgagggggaaggaggggtataCCTCagagtgagaa ggaggaggaaaaggcctgATTTAAATTTAGCCTTCAACCTGCTTccctgg gagaaggaaagctaTGTACATGCGATGCCTCCGGGAGTGTTATTTGTGAC AGATAGGCAGAGCGCGAGCCTAGCAGAAGGTCCCTTGGCCGGGCTACGTA AAAAAGACATCAATACCAATACTCAAGATTTATTGTATCGGCATGGAGCT CAAAGTATCTCGCGCAAGGTGTCCTGTAAAATGACAAGTCAAACATAGaT GGCCGAagtcgtccctcccccttcctttcctccccgcttgCCTCGCCTGC AGCACTTGCTCCTAGGGAACGTGTGGGCGTCCGCCATTGGGGCGGCGGCA TTGGCAGCTGCCTTTGCTTCTGGcgcttgcccctccctcctgaccctgGA CATGTCCTACAACGATTTACACAGCGCCGGAGCTcaagccctcctctccg cctttgCATCCAGCGGCGCGTGTGCCAAATTACAGAGGTTGAATCTGGCA GGTAACGGTCTGGGGGCACAGGGGGCGTGGGAGATTGGGAGGGCCTTTGC CAGCGGGTGGGGCAAAGCGCTTCGCGTGTTGTCCTTGGCGAGCAATGGTT TAGGGGCCGGGGGTGTGGAAGCGCTCTTAGAAGctgcgagggggggcaca gggagggagggagggagggagcgtgaTCGTCCCTTTCGGTACTACCAtgt gcgggaggaaggcatgaatgtgggaggagggagaagggatcATCTGCGCC CAGACttcgcctcgtcgtcctATCTGGCAtcgacgtcctcctcctccgcc ttgccccccccccttcttgtcACGGTCCCTTCTGAGGCTTCCTCCTACCC TCTTCAGAGCCTCCAAATCCTAAATCTCTTTCTCAATGGTGCCGGGGATG AAGGTGCGAGTGAAGTCGCGGCGGCCTTAGCCCACgggttcctcccctcc ctccaatttTTGGACCTGGCTGCCAATCGTATCACTCAAGAAGGGGTGGG TGGGCTCGTGAGTGCGTTGCAGGAAGATCGGGATGGGattgagggggaag gaggggtataCCTCagagtgagaaggaggaggaaaaggcctgATTTAAAT TTAGCCTTCAACCTGCTTccctgggagaaggaaagctaTGTACATGCGAT GCCTCCGGGAGTGTTATTTGTGACAGATAGGCAGAGCGCGAGCCTAGCAG AAGGTCCCTTGGCCGGGCTACGTAAAAAAGACATCAATACCAATACTCAA GATTTATTGTATCGGCATGGAGCTCAAAGTATCTCGCGCAAGGTGTCCTG TAAAATGACAAGTCAAACATAG back to top
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