EWM25964.1, cds4710 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|585107849|gb|EWM25964.1| (Leucine-rich repeat, ribonuclease inhibitor subtype [Nannochloropsis gaditana]) HSP 1 Score: 714.146 bits (1842), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0 Query: 1 MAEVVPPPSFPPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSALQEDRDGIEGEGGVYLRVRRRRKRPDLNLAFNLLPWEKESYVHAMPPGVLFVTDRQSASLAEGPLAGLRKKDINTNTQDLLYRHGAQSISRKVSCKMTSQT 357 MAEVVPPPSFPPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSALQEDRDGIEGEGGVYLRVRRRRKRPDLNLAFNLLPWEKESYVHAMPPGVLFVTDRQSASLAEGPLAGLRKKDINTNTQDLLYRHGAQSISRKVSCKMTSQT Sbjct: 1 MAEVVPPPSFPPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSALQEDRDGIEGEGGVYLRVRRRRKRPDLNLAFNLLPWEKESYVHAMPPGVLFVTDRQSASLAEGPLAGLRKKDINTNTQDLLYRHGAQSISRKVSCKMTSQT 357
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|553194787|ref|XP_005856030.1| (hypothetical protein NGA_0514900 [Nannochloropsis gaditana CCMP526] >gi|422293022|gb|EKU20323.1| hypothetical protein NGA_0514900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 279.641 bits (714), Expect = 1.024e-87 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0 Query: 1 MAEVVPPPSFPPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDR 144 MAEVVPPPSF PRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDR Sbjct: 239 MAEVVPPPSFLPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDR 382
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|551589792|ref|XP_005779381.1| (hypothetical protein EMIHUDRAFT_236263 [Emiliania huxleyi CCMP1516] >gi|485631885|gb|EOD26952.1| hypothetical protein EMIHUDRAFT_236263 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 72.7886 bits (177), Expect = 1.952e-10 Identity = 77/257 (29.96%), Postives = 108/257 (42.02%), Query Frame = 0 Query: 9 SFPPRLPRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKA-----LRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALA-HGFLPSLQFLDLAANRITQEGVGGLVSALQE 259 +F + + L N+ AA LA ASGA P L TL + N + G +AL++A GA +L++L+L N +G +G +A A+ GK L L L N +G G +AL A G+EG R Y + E G D + A+ A P L+ L+L N GDEG +AAAL G P L+ L L+ N+I EG L +AL+E Sbjct: 281 AFKEQFGKATVLFYNNLGWGDAEAAQLAEVLASGAAPRLETLYLGENKIGDEGCKALVAALGKEGAAPRLEKLDLNWNKIGDEGC----KALAAALGKEGAAPRLETLYLGENKIGDEGCKALAAA----LGKEGAAPRLETL-YLYRNEIG-------------DEGCKALAAALGKEGAAP-----------------RLETLSLHRNEIGDEGCKALAAALGKEGAAPRLKELGLSGNQIGDEGCTALAAALKE 498
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|971508361|dbj|GAQ89834.1| (hypothetical protein KFL_005680010, partial [Klebsormidium nitens]) HSP 1 Score: 71.633 bits (174), Expect = 5.353e-10 Identity = 76/238 (31.93%), Postives = 102/238 (42.86%), Query Frame = 0 Query: 31 GAAALAAAFAS-GACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKA-----LRVLSLASNGLGAGGVEALLEAARGGTGREG--GRERDRPFRYYHVREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALA-HGFLPSLQFLDLAANRITQEGVGGLVSALQE 259 GA ALA A G C +L TLD+ ND+ GA+AL +A G C LQ LNL N +G GA +A A+ GK L+ L L S +G G +AL A G+EG + + +EG A ++ L + SA LQ LNL+ N G EGA +A AL G P+LQ LDL ++I +G L +A + Sbjct: 8 GARALAEALGKEGTCHALQTLDLHSNDIGVEGARALATALGKEGTCPNLQTLNLRYNQIGYDGA----QALATALGKEGTCPNLQTLDLYSYDIGDEGAQALATA----LGKEGTCSNLQTLDLSLNQIGDEGAR-------------ALATALGKEGTCSA--------------------LQTLNLYYNQIGVEGARALATALGKEGTCPNLQTLDLEEHQIGDDGARALATAFAD 204 HSP 2 Score: 66.6254 bits (161), Expect = 2.261e-8 Identity = 53/130 (40.77%), Postives = 67/130 (51.54%), Query Frame = 0 Query: 15 PRLQHLLLGNVWASAIGAAALAAAFAS-GACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGK-----ALRVLSLASNGLGAGGVEALLEAARGGTGREG 138 P LQ L L GA ALA A G CP+L TLD+ D+ GAQAL +A G C+ LQ L+L+ N +G +GA RA A+ GK AL+ L+L N +G G AL A G+EG Sbjct: 54 PNLQTLNLRYNQIGYDGAQALATALGKEGTCPNLQTLDLYSYDIGDEGAQALATALGKEGTCSNLQTLDLSLNQIGDEGA----RALATALGKEGTCSALQTLNLYYNQIGVEGARALATA----LGKEG 175 HSP 3 Score: 62.7734 bits (151), Expect = 4.530e-7 Identity = 48/121 (39.67%), Postives = 61/121 (50.41%), Query Frame = 0 Query: 15 PRLQHLLLGNVWASAIGAAALAAAFAS-GACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKA-----LRVLSLASNGLGAGGVEALLEA 129 P LQ L L + GA ALA A G C +L TLD+S N + GA+AL +A G C+ LQ LNL N +G +GA RA A+ GK L+ L L + +G G AL A Sbjct: 85 PNLQTLDLYSYDIGDEGAQALATALGKEGTCSNLQTLDLSLNQIGDEGARALATALGKEGTCSALQTLNLYYNQIGVEGA----RALATALGKEGTCPNLQTLDLEEHQIGDDGARALATA 201
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|157863880|ref|XP_001687491.1| (conserved hypothetical protein [Leishmania major strain Friedlin] >gi|68223702|emb|CAJ01931.1| conserved hypothetical protein [Leishmania major strain Friedlin]) HSP 1 Score: 67.781 bits (164), Expect = 6.667e-9 Identity = 80/254 (31.50%), Postives = 117/254 (46.06%), Query Frame = 0 Query: 16 RLQHLLLGNVWASAIGAAALAAAFASGACPS---------LLTLDMSYNDLHSAGAQALLSAFASSGACAK-LQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGR---RDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSA 256 +LQHL L + + IG ALA+AF PS L +L + N L G LL A +++ AC + L R++L+ N +G G + RA+ L V LA+N LG G L EA + R GG+ + Y + GR + D + + AL L ++A+ SL+ILNL N GDEGA+ V AA+ +PSL+ LD++ N+IT G +V+A Sbjct: 91 QLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLVLMGNQL---GDDTLL-AMSNAAACHRDLTRVDLSWNKVGQNGTKCLMRAYQR---NPLCVYQLAANALGDEGTVYLCEALQ----RYGGKSQTTLNLYRNAISCPGTEAVGRLLANSSIVQDVSLAGNTIGFKGVQALQRQL-----TDAAVIASCSLRILNLSNNWIGDEGAASV-AAIIKANIPSLERLDVSENKITDVGATAIVTA 327
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|585104678|gb|EWM23557.1| (Leucine-rich repeat, cysteine-containing subtype [Nannochloropsis gaditana]) HSP 1 Score: 67.3958 bits (163), Expect = 1.315e-8 Identity = 74/246 (30.08%), Postives = 107/246 (43.50%), Query Frame = 0 Query: 29 AIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGRRDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEA-SSYPLQSLQILNLFL------------NGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSALQEDR 261 A G LA GACP L +L+++ + GA+AL A + G L+ L LAGNG+G++G + +A G G LRVL + N A G+ ++EA V EE ++VG H YLA T S LP + +P A S+ +++L N +GA +A ALA G +P+L+ L L+ NRI +G L AL + R Sbjct: 156 ACGTRMLAERLRGGACPELDSLNLTACGIGPGGAEALSIAMQTHGLAPSLRVLRLAGNGMGSRGVTVLAKALKGGAGANLRVLDMDGNKANAVGMLLMIEALSQAA--------------CPVLEE-LSVG-----HNTLTDKGLVYLAKTLVDSKLPQLRRLAIPESAVSTEGIRALARALSLGGGGGLETLDLSDNHLYPQGAEALAIALAQGAVPALRRLILSRNRIYGDGTAALTEALGQGR 381
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|398010008|ref|XP_003858202.1| (hypothetical protein, conserved [Leishmania donovani] >gi|322496408|emb|CBZ31478.1| hypothetical protein, conserved [Leishmania donovani]) HSP 1 Score: 66.6254 bits (161), Expect = 1.837e-8 Identity = 79/254 (31.10%), Postives = 116/254 (45.67%), Query Frame = 0 Query: 16 RLQHLLLGNVWASAIGAAALAAAFASGACPS---------LLTLDMSYNDLHSAGAQALLSAFASSGACAK-LQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGR---RDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSA 256 +LQHL L + + IG ALA+AF PS L +L + N G LL A +++ AC + L R++L+ N +G G + RA+ L V LA+N LG G L EA + R GG+ + Y + GR + D + + AL L ++A+ SL+ILNL N GDEGA+ V AA+ +PSL+ LD++ N+IT G +V+A Sbjct: 91 QLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLVLMGNKF---GDDTLL-AMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQR---NPLCVYQLAANALGDEGTVYLCEALQ----RYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDVSLAGNTIGFKGVQALQRQL-----TDAAVIASCSLRILNLSNNWIGDEGAASV-AAIIKANIPSLERLDVSENKITDVGATAIVTA 327
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|585106779|gb|EWM25141.1| (Leucine-rich repeat, ribonuclease inhibitor subtype [Nannochloropsis gaditana]) HSP 1 Score: 66.6254 bits (161), Expect = 1.902e-8 Identity = 51/114 (44.74%), Postives = 60/114 (52.63%), Query Frame = 0 Query: 23 GNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGR 136 GNV + G A LA AF GAC L L + ND+ G Q LLSAFA SGAC L L+L N G GA + A +SG LRVL+L +G G+ AL EA G R Sbjct: 301 GNVLGPS-GTAHLARAFRRGACTQLRQLHLRNNDVRGQGLQDLLSAFA-SGACPHLTVLSLESNMFGTVGARWLAHALSSGACADLRVLNLNFTFIGEHGMRALAEAFGQGACR 412
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|401414813|ref|XP_003871903.1| (conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] >gi|322488124|emb|CBZ23370.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103]) HSP 1 Score: 66.2402 bits (160), Expect = 2.572e-8 Identity = 78/254 (30.71%), Postives = 116/254 (45.67%), Query Frame = 0 Query: 16 RLQHLLLGNVWASAIGAAALAAAFASGACPS---------LLTLDMSYNDLHSAGAQALLSAFASSGACAK-LQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEAARGGTGREGGRERDRPFRYYHVREEGMNVGGGR---RDHLRPDFASSSYLASTSSSSALPPPLLVTVPSEASSYPLQSLQILNLFLNGAGDEGASEVAAALAHGFLPSLQFLDLAANRITQEGVGGLVSA 256 +LQHL L + + IG ALA+AF PS L +L + N G LL A +++ AC + L R++L+ N +G G + RA+ L V LA+N LG G L EA + R GG+ + Y + GR + D + + AL L ++A+ +L+ILNL N GDEGA+ V AA+ +PSL+ LD++ N+IT G +V+A Sbjct: 92 QLQHLNLSHNDMTDIGGIALASAFIPNVSPSGQPGQWNRTLFSLVLMGNKF---GDDTLL-AMSNAAACHRDLTRVDLSWNNVGQNGTKCLMRAYQRN---PLCVYQLAANALGDEGTVYLCEALQ----RYGGKSQTTLNLYRNSISCPGTEAVGRLLANSSIVQDVSLAGNTIGFKGVQALQRQL-----TDAAVIASCTLRILNLSNNWIGDEGAASV-AAIIKANIPSLERLDVSENKITDVGATAIVTA 328
BLAST of EWM25964.1 vs. NCBI_GenBank
Match: gi|1173954106|gb|OQS01599.1| (hypothetical protein ACHHYP_00600 [Achlya hypogyna]) HSP 1 Score: 66.2402 bits (160), Expect = 2.909e-8 Identity = 44/115 (38.26%), Postives = 57/115 (49.57%), Query Frame = 0 Query: 15 PRLQHLLLGNVWASAIGAAALAAAFASGACPSLLTLDMSYNDLHSAGAQALLSAFASSGACAKLQRLNLAGNGLGAQGAWEIGRAFASGWGKALRVLSLASNGLGAGGVEALLEA 129 PRL L L G +LA AFA GAC L TLD+ N L++A Q LL A +G KL L AGN +G +G + AF G + L + L SN + + G A+ A Sbjct: 334 PRLHELNLAWNDIKLRGVTSLAEAFAQGACGQLTTLDLRANSLNAASLQLLLDALG-AGGLPKLLHLVFAGNAIGDRGGKAVAHAFLQGALRHLATIDLKSNMIKSDGCRAIFNA 447 The following BLAST results are available for this feature:
BLAST of EWM25964.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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