EWM25972.1, cds4701 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|585107867|gb|EWM25972.1| (twist neighbor [Nannochloropsis gaditana]) HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0 Query: 1 MPKRRRVNQEKGNDVAGEDDKIVPSPVIQVPFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLREEGGEPRAPVAGLREGDGGGKGGEGGREVEEEERKGGAGREGKKRDTRGTAEEGASVKKRKEGTGKAEAKAHKKGKGKRLKGEKGPA 282 MPKRRRVNQEKGNDVAGEDDKIVPSPVIQVPFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLREEGGEPRAPVAGLREGDGGGKGGEGGREVEEEERKGGAGREGKKRDTRGTAEEGASVKKRKEGTGKAEAKAHKKGKGKRLKGEKGPA Sbjct: 1 MPKRRRVNQEKGNDVAGEDDKIVPSPVIQVPFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLREEGGEPRAPVAGLREGDGGGKGGEGGREVEEEERKGGAGREGKKRDTRGTAEEGASVKKRKEGTGKAEAKAHKKGKGKRLKGEKGPA 282
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|298708392|emb|CBJ48455.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.88 bits (333), Expect = 8.105e-34 Identity = 72/178 (40.45%), Postives = 109/178 (61.24%), Query Frame = 0 Query: 31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGT-GGK----EVLGLGEEVAFRVVLVHEAAGLIALDGSLREEGGEPRA 203 PF+E + ++LLP +G++ I ++ LM+YN+ +GG+LL +S + F R + ++PH+H V+A + VF P PG L G V KVTSTHV +LV G+FNA++A E M + + FD W + GGK EV+ +G ++ F V +HEAAGLI+++GSL G P+A Sbjct: 5 PFEEVELKMCVSLLPSDIGDIYAGIRRNIYQFLMRYNEALGGVLLAVSDLSFGDGAREGRIEDEMPHIHFDVKAKAQVFRPRPGHVLQGRVNKVTSTHVGMLVCGIFNASVASESMGEGFRFDMTAREWQRSRGGKHGAGEVIAVGADMQFVVTRMHEAAGLISIEGSLE---GLPKA 179
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|669157884|ref|XP_008614504.1| (hypothetical protein SDRG_10298 [Saprolegnia diclina VS20] >gi|530733860|gb|EQC32102.1| hypothetical protein SDRG_10298 [Saprolegnia diclina VS20]) HSP 1 Score: 132.109 bits (331), Expect = 1.611e-33 Identity = 66/165 (40.00%), Postives = 103/165 (62.42%), Query Frame = 0 Query: 31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLR 195 PF +++ +L P + + ++ + E+L+ MLMKY V G++L + + + ++ + P++HVRV A +LVF P PGM L+ VV KV S H+ LL+ G+FN +I +MPD Y ++ EAWVG G + LG EVAF V+ VH+A G+I++DGS+R Sbjct: 15 PFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCDPVEGVILAFNAITL--LNPYGHIINETPYIHVRVAADALVFRPTPGMELSAVVNKVGSNHIGLLLAGVFNVSIDAAEMPDGYTHNFHEEAWVGDDGVTI-ELGAEVAFNVLRVHQAYGVISIDGSMR 176
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|813149771|ref|XP_012200532.1| (hypothetical protein SPRG_20002 [Saprolegnia parasitica CBS 223.65] >gi|641534865|gb|KDO28795.1| hypothetical protein SPRG_20002 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 130.568 bits (327), Expect = 4.734e-33 Identity = 65/165 (39.39%), Postives = 102/165 (61.82%), Query Frame = 0 Query: 31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLR 195 PF +++ +L P + + ++ + E+L+ MLMKY V G++L + + + ++ + P++HVRV A +LVF P PGM L+ VV KV S H+ LL+ G+FN +I +MPD Y ++ EAWVG G + G EVAF V+ VH+A G+I++DGS+R Sbjct: 3 PFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCDPVEGVILAFNAITL--LNPYGHIINETPYIHVRVAADALVFRPTPGMQLSAVVNKVGSNHIGLLLAGVFNVSIDSTEMPDGYVHNFQEEAWVGDDGVTI-EFGAEVAFHVLRVHQAYGVISIDGSMR 164
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|1173947315|gb|OQR95652.1| (nitroreductase family [Thraustotheca clavata]) HSP 1 Score: 132.494 bits (332), Expect = 6.973e-32 Identity = 65/168 (38.69%), Postives = 104/168 (61.90%), Query Frame = 0 Query: 31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLREEG 198 PF +++ +L P + + ++ + E+L+ MLMKY V G+LL + V+ + ++ + P++H+RV A +LVF P+ GM L+ VV KV S H+ LL+ G+FN +IA ++MP+ YA Y +AWV G + L EV F+V+ VH A G+I++DGS+R G Sbjct: 3 PFVNAKLVMSCSLAPCHIQDAKKGLEEQLNTMLMKYCDPVEGVLLAFNSVQL--LNPYGHIINETPYIHIRVAADALVFRPQTGMELSAVVCKVGSNHIGLLLNGVFNVSIASDEMPEGYAHSYSDDAWVNEDGATI-ALESEVTFQVLRVHVAHGVISIDGSMRLVG 167
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|673029598|ref|XP_008868760.1| (hypothetical protein H310_05728 [Aphanomyces invadans] >gi|574475155|gb|ETW02155.1| hypothetical protein H310_05728 [Aphanomyces invadans]) HSP 1 Score: 126.331 bits (316), Expect = 2.409e-31 Identity = 61/165 (36.97%), Postives = 101/165 (61.21%), Query Frame = 0 Query: 32 FQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLRE 196 F + +++ +L P + N ++ + ++L+ MLMKY V G+LL + ++ + ++ + P++HVR+ A +LVF P PGM LTG V KV S H+ LL+ G+FN +IA +MP + +Y +AW+G + + + V FRVV VH A G+I++DGS+R Sbjct: 7 FAKAKLVMSCSLAPYHIQNAKKGLEDQLNLMLMKYCDPVQGVLLAFNSLQV--INPYGHIINETPYIHVRIAADALVFRPTPGMQLTGTVSKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWIGQDSSAI-AVDDSVEFRVVKVHVAHGVISIDGSMRS 168
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|1173950115|gb|OQR98094.1| (hypothetical protein ACHHYP_09215 [Achlya hypogyna]) HSP 1 Score: 123.25 bits (308), Expect = 4.011e-30 Identity = 60/165 (36.36%), Postives = 101/165 (61.21%), Query Frame = 0 Query: 31 PFQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLR 195 PF +++ +L P + + ++ + E+L+ MLMKY + V G++L ++ + ++ + P++HV+V +LVF P+ GM+L+ V KV S+H+ LL+ G+FN +IA DMP YA Y +AW+ G + L EV+F VV VH A G+I+++GS+R Sbjct: 3 PFVNAKLVMSCSLAPCHIHDAKKGLEEQLNLMLMKYCEPVEGVVLAFDGIKL--LNPYGHIINETPYIHVKVATEALVFRPKAGMTLSANVNKVGSSHIGLLLAGVFNVSIAAADMPKGYAHSYSDDAWINEDGATI-ALESEVSFTVVRVHVAHGVISIEGSMR 164
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|673029600|ref|XP_008868761.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574475156|gb|ETW02156.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 122.479 bits (306), Expect = 4.875e-30 Identity = 60/158 (37.97%), Postives = 96/158 (60.76%), Query Frame = 0 Query: 39 FKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLRE 196 +L P + N ++ + ++L+ MLMKY V G+LL + ++ + ++ + P++HVR+ A +LVF P PGM LTG V KV S H+ LL+ G+FN +IA +MP + +Y +AW+G + + + V FRVV VH A G+I++DGS+R Sbjct: 1 MSCSLAPYHIQNAKKGLEDQLNLMLMKYCDPVQGVLLAFNSLQV--INPYGHIINETPYIHVRIAADALVFRPTPGMQLTGTVSKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWIGQDSSAI-AVDDSVEFRVVKVHVAHGVISIDGSMRS 155
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|698801618|ref|XP_009833838.1| (hypothetical protein H257_09342 [Aphanomyces astaci] >gi|574111429|gb|ETV76925.1| hypothetical protein H257_09342 [Aphanomyces astaci]) HSP 1 Score: 123.25 bits (308), Expect = 4.948e-30 Identity = 59/165 (35.76%), Postives = 102/165 (61.82%), Query Frame = 0 Query: 32 FQEQRVLFKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLRE 196 F + +++ +L P + + ++ + ++L+ MLMKY++ V G+LL + ++ + ++ + P++HVR+ A +LVF P PGM LT V KV S H+ LL+ G+FN +IA +MP + +Y +AWVG + + + V FRV+ VH A G+I++DGS+R Sbjct: 7 FAKAKLVMSCSLAPYHIQDPKKGLEDQLNHMLMKYSEPVQGVLLAFNSLQV--INPYGHIINETPYIHVRIAADALVFRPTPGMQLTATVNKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWVGKDSSAI-AVDDAVEFRVLQVHVAHGVISIDGSMRS 168
BLAST of EWM25972.1 vs. NCBI_GenBank
Match: gi|698801616|ref|XP_009833837.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574111430|gb|ETV76926.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 119.783 bits (299), Expect = 7.549e-29 Identity = 58/157 (36.94%), Postives = 97/157 (61.78%), Query Frame = 0 Query: 39 FKLALLPDAMGNLEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHVRVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAYAFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLR 195 +L P + + ++ + ++L+ MLMKY++ V G+LL + ++ + ++ + P++HVR+ A +LVF P PGM LT V KV S H+ LL+ G+FN +IA +MP + +Y +AWVG + + + V FRV+ VH A G+I++DGS+R Sbjct: 1 MSCSLAPYHIQDPKKGLEDQLNHMLMKYSEPVQGVLLAFNSLQV--INPYGHIINETPYIHVRIAADALVFRPTPGMQLTATVNKVGSNHIGLLLAGVFNVSIAATEMPSGFVHNYHEDAWVGKDSSAI-AVDDAVEFRVLQVHVAHGVISIDGSMR 154 The following BLAST results are available for this feature:
BLAST of EWM25972.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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