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Properties
| Property Name | Value |
|---|
| Product | twist neighbor |
| Orig transcript id | gnl|cribi|Naga_100557g1.10088.mrna |
| Orig protein id | gnl|cribi|Naga_100557g1.10088 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:150996..152125 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4713 ID=rna4713|Name=rna4713|organism=Nannochloropsis gaditana|type=mRNA|length=1763bp
TAAAGTCCCTCACATCGGTAGGAAAAAAATATTGTCGACATCTCTCTCGA
TTATTCTGCCAATTTTAAGCGCTATACGACCGTGTTTTGATGAAAGGGAG
GTCGATACAGAAAATTTCATCAGCCATGACGTGCCGAGTATCTCTCAAAA
ATGGTCCTTGCGGCCCAACTCGCTCGGTTGCAATCAAAACCCAGGCTCGA
TGGACGCGTGCCTCACGCACGCTTTTCCACCCCACTCCACTATCGCGATC
TACCACCATAGGTGTTGAGGCGATGAGGTCATGGGCTTGGCAATGGTCCC
GTTCCTTGAGAGGGGCCGGGTCAGCTGGCCTCCCTTTCTGCCTTTTGCCC
CTCCTTTCCCTCGGATCCCTCCCCCCCGTCAAGTCCATCTTTACAAGTGC
CATGACACCGTCCACCTTCCTTCGGCCTCCCTCTTGGTGGCCTTCGTGCA
TCTCGGTCAAAGGGGTTCCGGCCCCGCGACACGATCTAGGAAGCCTCTCC
TCTGCCAGTCTACGTAATGGGCGGAGACGGTCGAGGCGCATGTTTTCTTC
CTCCTCCGCATCTTCCTCCCCTTCGTCTTCTTCTTCTTTCTCCTCCTCCA
TCCTGTCTTCCGCCGAGACGCCCATTCAGGACCCCGCCGAGCTCAAGCGG
GCGCTCGCGGAGGCCGCACGGGCCATTGAAGCCAACACCGCTGCCTTAAA
TCTGCCCAAAATCATGGGGGAAATCGATTACTGCGAACAAGAGGCAGCCC
AGGAGAGTTTCTGGGAGCGGCCGGGGGAGGCTCGGGAGAAAATGAGCGTC
TTGGCCGGGCTGCAAGGCACGGTGGCCCGTGTGGACCGATGGCGGCGACA
GTACGAGGACGTGGCGACCGCCCTGGCCCTGTGGGAGGAAGGAGGGGGGG
AGGAATGGGGAGAGGAAGGGAAGGAAGGGATGCGGAGACTCCAGCAGGAC
TTGGTCACGTGGGAGGTGGATCAGCTTTTGTCGGGCCCATACGATGCCTG
TGGGTGCCGAGTGGCCATCACTGCTGGGGCGGGGGGCACTGACGCCAGCG
ACTGGGCGGGGATGTTGCTGCGGATGTACTTGAGGTACGGGGAGAGGAAA
GGATGGAAGCTGCGAATGCTGGAGAAACAGGTGTCGACGGAAGGGGTGGG
GATCAAGGGGGCGCTGTTGGAAGTGGAGGGGGAGAAGGCGTACGGCTTAT
TGAAAGCGGAGGAAGGCACACACCGCCTGGTCCGGATCAGCCCTTTCAAC
GCGGCGGGGAAGCGGCAAACCTCCTTTGCAGGGGTGGAAGTGATGCCCAT
CCTGTCGGACGAGCGGCTGGAGGACGTGGTGCTGGCGGAGGGGGAGGTGG
AGATGACAACCTTTCGGTCGGGCGGGGCGGGGGGGCAGAACGTCAACAAG
GTGGAGACGGCGGTGCGACTCAAGCACTTGCCCACCGGCCTGGTGGCTCG
GTGCCAGGAGGAACGTTCCCAGATGTTGAACCGGAAAAAGGCGACGGCCC
TGCTCAAGGCCAAGCTCTTGGCGGTCAAAGAGGCGCAAAGGGTGGAGGCC
CTGGCAGAAATCCGGGGCGACCTGATCGAAGCCTCGTGGGGGCAGCAGAT
CCGAAACTACGTTCTGCATCCGTACAAACTCGTGAAGGATACCCGGAGCG
GGCGGGAAACCCCCGACGTGTCGGGCGTTTTGGACGGGGGGGAGGTGCTG
GAGGACTTCATCGGGGCCTACCTACGGTTGCGGGCGGCGGAGGGGAAGGA
GGAAGGAGGGTGA back to topprotein sequence of rna4713 >rna4713-protein ID=rna4713-protein|Name=rna4713|organism=Nannochloropsis gaditana|type=polypeptide|length=282bp
MPKRRRVNQEKGNDVAGEDDKIVPSPVIQVPFQEQRVLFKLALLPDAMGN
LEESIHEKLHGMLMKYNQDVGGILLTLSQVRFPPSRRFASMMGDLPHLHV
RVEATSLVFTPEPGMSLTGVVIKVTSTHVALLVYGLFNAAIAREDMPDAY
AFDYDREAWVGTGGKEVLGLGEEVAFRVVLVHEAAGLIALDGSLREEGGE
PRAPVAGLREGDGGGKGGEGGREVEEEERKGGAGREGKKRDTRGTAEEGA
SVKKRKEGTGKAEAKAHKKGKGKRLKGEKGPA back to topmRNA from alignment at CM002464.1:150996..152125+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4713 ID=rna4713|Name=rna4713|organism=Nannochloropsis gaditana|type=mRNA|length=1130bp|location=Sequence derived from alignment at CM002464.1:150996..152125+ (Nannochloropsis gaditana)
GATGTGAGGGACTTTAACTGTTCAGCGGgcacctccctcgtccctggCAT
CTTACCGAGTTAAATGACTTTATGAGCCCGTTTAGCACTGTTTGCAGGGG
GCATCCCACTGTCCACTGTCCAATCAAGCAATTCAAATGCTGACTCTTTC
ACATCTACTCTTCTGGAAGCATTTCTGAGGCTAAATTGACGCGGAGACAA
TTCGAtcgatcgcctccacctcctcactcaacctcccctgccttccctcc
atccgctccTCTTCGCAGTCGAGCACCCACCATGCCGAAACGACGACGCG
TGAatcaagaaaaagggaaCGATGTTGCCGGCGAGGACGACAAAATCGTC
CCGTCCCCGGTTATCCAGGTTCCCTTCCAAGAGCAGCGAGTCCTGTTTAa
gctggccctccttccggaCGCGATGGGCAATTTGGAGGAAAGCATACACG
AGAAACTTCACGGCATGCTCATGAAGTACAAccaggacgtgggcgggaTC
TTGCTCACTCTATCCCAGGTgcgtttccctccgtcccggaGGTTCGCCAG
CATGATGGGGGATTTGCCGCATTTGCACGTGCGGGTGGAAGCCACCTCCC
TGGTCTTTACGCCGGAGCCTGGCATGTCCTTGACGGGCGTGGTGATCAAG
GTCACGTCCACGCACGTGGCCTTGTTGGTGTACGGCCTGTTCAACGCGGC
GATTGCCAGGGAGGACATGCCCGACGCCTACGCATTTGACTACGACCGGG
AAGCCTGGGTGggcacaggagggaaggaagtacTCGGgctaggggaggag
gtggcgttCCGGGTTGTGCTAGTGCACGAAGCGGCCGGTCTAATCGCTTT
GGATGGGTCcctgcgggaagaggggggcgagcCGCGGGCGCCCGTGGCGG
GCTtgcgggagggggatggagggggaaaaggaggggaaggggggagggag
gtcgaggaggaggaaaggaagggaggggcgggaagggagggaaagaaaag
agataCGAGGGGGACAGCAGAAGAAGGCGCGAGCgtaaagaagaggaagg
aggggacggggaaggcggaggcgaaagcccacaagaaagggaagggaaag
cgcctcaaaggagagaagggaccGGCCTAG back to topCoding sequence (CDS) from alignment at CM002464.1:150996..152125+ >rna4713 ID=rna4713|Name=rna4713|organism=Nannochloropsis gaditana|type=CDS|length=849bp|location=Sequence derived from alignment at CM002464.1:150996..152125+ (Nannochloropsis gaditana)
ATGCCGAAACGACGACGCGTGAatcaagaaaaagggaaCGATGTTGCCGG
CGAGGACGACAAAATCGTCCCGTCCCCGGTTATCCAGGTTCCCTTCCAAG
AGCAGCGAGTCCTGTTTAagctggccctccttccggaCGCGATGGGCAAT
TTGGAGGAAAGCATACACGAGAAACTTCACGGCATGCTCATGAAGTACAA
ccaggacgtgggcgggaTCTTGCTCACTCTATCCCAGGTgcgtttccctc
cgtcccggaGGTTCGCCAGCATGATGGGGGATTTGCCGCATTTGCACGTG
CGGGTGGAAGCCACCTCCCTGGTCTTTACGCCGGAGCCTGGCATGTCCTT
GACGGGCGTGGTGATCAAGGTCACGTCCACGCACGTGGCCTTGTTGGTGT
ACGGCCTGTTCAACGCGGCGATTGCCAGGGAGGACATGCCCGACGCCTAC
GCATTTGACTACGACCGGGAAGCCTGGGTGggcacaggagggaaggaagt
acTCGGgctaggggaggaggtggcgttCCGGGTTGTGCTAGTGCACGAAG
CGGCCGGTCTAATCGCTTTGGATGGGTCcctgcgggaagaggggggcgag
cCGCGGGCGCCCGTGGCGGGCTtgcgggagggggatggagggggaaaagg
aggggaaggggggagggaggtcgaggaggaggaaaggaagggaggggcgg
gaagggagggaaagaaaagagataCGAGGGGGACAGCAGAAGAAGGCGCG
AGCgtaaagaagaggaaggaggggacggggaaggcggaggcgaaagccca
caagaaagggaagggaaagcgcctcaaaggagagaagggaccGGCCTAG back to top
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