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Properties
Property Name | Value |
Product | Tetratricopeptide-like helical |
Orig transcript id | gnl|cribi|Naga_100897g1.3247.mrna |
Orig protein id | gnl|cribi|Naga_100897g1.3247 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:63957..65732 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4688 ID=rna4688|Name=rna4688|organism=Nannochloropsis gaditana|type=mRNA|length=1075bp CCCTCCTCCCCTCCCACTTTTTCTCCCTCCTGACCTCCCTTTTCCCTCCC TTTGTATGCCCTGTCCTCTCCTCTTCTCCTCTCCTTTACTTGTTGTTTTG TGGCCTGATTGCACACTGTACATTCATATATCTTGTCGTCCTTGCCCCCC CTTCTCCCTCCCATTTTTTCTTAGGTCTATTTGGGGGATAAAGGTGGCGA AGAGGGAGCTAAGCTCAAAGATCTGACCAAAATGGACGAAAACTTGTCCA AGGCTCTGAAGCTCTACGAAAAGTATCTCTCCCCTTCGGATCCTCGTATG GGCCAAGTGCTCGTGGCCATCGGGCAGCACCGGCACATGATTGGGCAAGC TGTTTCCGCGGAGGGCCTTTTCCGCTCCGTCATCGACCTCCTATCGACGC CTTCCGGCCTGGCCTCCCCACAACTGCGCTACTCGCTCTACAGGGCTTAC TACGGCTACGGAAACCTGCTGGCGGATTGGGAAGGACGGGAGAGGGACGC AGCCCACATGCGTGAAAAAGCGTCGCAGGTGAAGGTCCTCCGGCTCAATC CCTACGTACCCCTGTCGCCCATGGTCTTTGTGGAGGGACAGGATCCGGGC GAAGTGGACTATTTCTAGGGAAAGAGGGAGGGAGGGAGGGAGGGAGGGAG GGAGGGAGGGAAATTATGGGGGCGGGGTTTGAGAAGGAGGTGTTGTAAGT GTGTAGGTGAGGAGGGGTCAGGATCGGGTGGGGGGTCAATAGGAAAATCA GATGAGACTTGAGGGACGATGTGTAGTGATTTCAACAGAAGCGGGAGGAA ATGACAGAAGACGAGCCTGTGTATGAAGCAGGAAGGAAGGAGGATGGAAA GAAGGGAGGGAGGAGGGCAAAAAGAGATGAAGAAAGCCATGGAGTGGCGA CTGGAAAGATCAAGAAATCAAGAGAAAACTAAAATCGAAGCGTCGGCTGT ATAAATCTCTGTTTTAAAAGAGTACGGGACGTATCAAAAAAGCGCTGTTT GAGGTATTCTGGTCTGAGAGAGTTTTGGATGTCTCCTTGCATCCTGGCAC GTCTACTCCACGAGCGCTGCCCCCC back to topprotein sequence of rna4688 >rna4688-protein ID=rna4688-protein|Name=rna4688|organism=Nannochloropsis gaditana|type=polypeptide|length=241bp MLSSCASVSSRIGYAAAACSFRPGSVHVSKRLFSPRVASSSFATHAYPTS SAFSLPTHDSSKQSRAHDLRRRPHRMMSTTTPPPPGQATQQSFFNSPATA SSFSSTDKPTPFRDALEQLQAFPEIKDAAKLREEHHFVRALPLMQRAIEV LDTNMGKGTLLAEAARYQLALYHIEAGEFKQAHALLQALLEDVQPSKNAV HDIFTVHLLLAGSALLQDQLPSAGSAAEEALAFVEVRPRLT back to topmRNA from alignment at CM002464.1:63957..65732- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4688 ID=rna4688|Name=rna4688|organism=Nannochloropsis gaditana|type=mRNA|length=1776bp|location=Sequence derived from alignment at CM002464.1:63957..65732- (Nannochloropsis gaditana) TGATACTAATATGCAGGCATAAAACAGCCCGACGATATCGTAAGATCTCT
CGAGTGAACCAGCGTACTATATGGATTGGGAACAGATGGAGCTAGGTTGG
GGTGTTTAGATATTATGTGGCGAATAGCATCAAAAAATGTAGTGAGGCAT
GTGGTTGAATCTTTTTGCTCTGCCTTGCTGTCCTTCATGTTCTGTTTGCT
GTCGCCCCACTTCTTGGCTTACGATCTCGTTTTTCCTGACTCACGACGAA
TCCCTTCTGCACATTTTTAGCCAATGTTATCATCGTGTGCCTCGGTATCA
TCTCGCATTGGTTATGCAGCGGCGGCATGTTCATTCAGGCCAGGATCGGT
GCACGTCAGCAAAAGGCTCTTCTCGCCTCGCGTGGCTTCTTCGTCCTTCG
CAACCCACGCATACCCCACTTCGTCTGCCTTTTCATTGCCCACGCATGAT
TCATCGAAACAGTCGCGTGCTCATGATCTGCGCCGACGTCCTCACCGCAT
GATGAGCACTACGACTCCGCCGCCCCCGGGACAGGCGACCCAACAATCAT
TTTTCAATTCTCCGGCGACGGCGTCCTCGTTTTCCAGCACCGACAAGCCC
ACTCCTTTCCGAGATGCCTTGGAACAGTTGCAGGCTTTTCCGGAGGTGCG
TGAATAGGACGAGAAGGGAGCATCGAGGCTCCAGCTGCCGGGAGACTCGG
CCAGCCTCGGCCGACGAAGATTCCCTTTTCTTCCTCCCTCTCCTGTTCTT
TCGTTGTCCCGGGGCATCATAATATGACCAACGTCTCTCCCAGTAACATC
AAATCACCACTCTTCCGTGGCGTCCTCTCTTTTCCCCCGCTCCTAGATCA
AGGATGCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCT
TTGATGCAGGTACGTCACAGAAGCGCATCTCGCATGACATACATACATGA
ACCTACAATAAAGGGACAGGTTCTTGAGACGTGCCCGTCCCATCCGAAGC
TCGCGATTTCAAAGTCTGGAGCTCATTTTTTTCCCCTCCTCCTTCGATCG
CCGCTCGATCGCATCCTCCTCCATGGTTGTAGCGCGCCATCGAAGTTCTC
GACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGGTAAGCAAAGGTC
ACTCTTCTCCGTTTTTTCTCAATTCCTCGTTCTTTGGTATCGTACCCTCA
CATCTTGTGTTATTACAATTTTAAACCGCCTCGCGCCCGACCCTAACGCT
CTTTATGCAGCGGCACGCTATCAGCTGGCGCTCTATCACATCGAAGCCGG
GGAGTTCAAGCAAGCACATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCC
AGGTGAGGGAGGGTGAAAGGGAAGGGGGGGCAGAAGAGATTCGGTTCCCA
CGGGGCGGGCGGAGAGAGGATACAGGCAGCAACTGTTTCGCTACGTCTCG
CCTTTCCTGCTTTTATGCCCTATCCTCTCCTCTCTTCTTCCCTCTATTGC
TTTCTTTCCATACCGTTCAGCCGAGCAAAAACGCAGTGCACGATATCTTC
ACAGTCCATCTCCTGCTAGCGGGCTCGGCGCTCTTACAGGATCAGTTGCC
CAGCGCTGGATCGGCCGCAGAGGAAGCTTTGGCATTTGTCGAGGTACGGC
CAAGGCTTACGTAGAAGGCGGTCGACAAGGGCAATGTCTGTCGTCTTGGG
GGGGCTGGAGGGTATCGCCGGGGGAGGGAGGGGGCGAGCGAAAAACTGGG
GGAGTCCCCATCTCACCCTCCCTCCC back to topCoding sequence (CDS) from alignment at CM002464.1:63957..65732- >rna4688 ID=rna4688|Name=rna4688|organism=Nannochloropsis gaditana|type=CDS|length=3630bp|location=Sequence derived from alignment at CM002464.1:63957..65732- (Nannochloropsis gaditana) CCGAGCAAAAACGCAGTGCACGATATCTTCACAGTCCATCTCCTGCTAGC GGGCTCGGCGCTCTTACAGGATCAGTTGCCCAGCGCTGGATCGGCCGCAG AGGAAGCTTTGGCATTTGTCGAGGTACGGCCAAGGCTTACGTAGCGGCAC GCTATCAGCTGGCGCTCTATCACATCGAAGCCGGGGAGTTCAAGCAAGCA CATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCCAGCGCGCCATCGAAGT TCTCGACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGATCAAGGAT GCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCTTTGAT GCAGATGTTATCATCGTGTGCCTCGGTATCATCTCGCATTGGTTATGCAG CGGCGGCATGTTCATTCAGGCCAGGATCGGTGCACGTCAGCAAAAGGCTC TTCTCGCCTCGCGTGGCTTCTTCGTCCTTCGCAACCCACGCATACCCCAC TTCGTCTGCCTTTTCATTGCCCACGCATGATTCATCGAAACAGTCGCGTG CTCATGATCTGCGCCGACGTCCTCACCGCATGATGAGCACTACGACTCCG CCGCCCCCGGGACAGGCGACCCAACAATCATTTTTCAATTCTCCGGCGAC GGCGTCCTCGTTTTCCAGCACCGACAAGCCCACTCCTTTCCGAGATGCCT TGGAACAGTTGCAGGCTTTTCCGGAGCCGAGCAAAAACGCAGTGCACGAT ATCTTCACAGTCCATCTCCTGCTAGCGGGCTCGGCGCTCTTACAGGATCA GTTGCCCAGCGCTGGATCGGCCGCAGAGGAAGCTTTGGCATTTGTCGAGG TACGGCCAAGGCTTACGTAGCGGCACGCTATCAGCTGGCGCTCTATCACA TCGAAGCCGGGGAGTTCAAGCAAGCACATGCCTTGCTCCAGGCCCTGCTG GAGGATGTCCAGCGCGCCATCGAAGTTCTCGACACGAATATGGGCAAGGG GACTCTCCTCGCTGAAGATCAAGGATGCTGCTAAGCTACGCGAGGAGCAC CATTTTGTCCGAGCTCTCCCTTTGATGCAGATGTTATCATCGTGTGCCTC GGTATCATCTCGCATTGGTTATGCAGCGGCGGCATGTTCATTCAGGCCAG GATCGGTGCACGTCAGCAAAAGGCTCTTCTCGCCTCGCGTGGCTTCTTCG TCCTTCGCAACCCACGCATACCCCACTTCGTCTGCCTTTTCATTGCCCAC GCATGATTCATCGAAACAGTCGCGTGCTCATGATCTGCGCCGACGTCCTC ACCGCATGATGAGCACTACGACTCCGCCGCCCCCGGGACAGGCGACCCAA CAATCATTTTTCAATTCTCCGGCGACGGCGTCCTCGTTTTCCAGCACCGA CAAGCCCACTCCTTTCCGAGATGCCTTGGAACAGTTGCAGGCTTTTCCGG AGCCGAGCAAAAACGCAGTGCACGATATCTTCACAGTCCATCTCCTGCTA GCGGGCTCGGCGCTCTTACAGGATCAGTTGCCCAGCGCTGGATCGGCCGC AGAGGAAGCTTTGGCATTTGTCGAGGTACGGCCAAGGCTTACGTAGCGGC ACGCTATCAGCTGGCGCTCTATCACATCGAAGCCGGGGAGTTCAAGCAAG CACATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCCAGCGCGCCATCGAA GTTCTCGACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGATCAAGG ATGCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCTTTG ATGCAGATGTTATCATCGTGTGCCTCGGTATCATCTCGCATTGGTTATGC AGCGGCGGCATGTTCATTCAGGCCAGGATCGGTGCACGTCAGCAAAAGGC TCTTCTCGCCTCGCGTGGCTTCTTCGTCCTTCGCAACCCACGCATACCCC ACTTCGTCTGCCTTTTCATTGCCCACGCATGATTCATCGAAACAGTCGCG TGCTCATGATCTGCGCCGACGTCCTCACCGCATGATGAGCACTACGACTC CGCCGCCCCCGGGACAGGCGACCCAACAATCATTTTTCAATTCTCCGGCG ACGGCGTCCTCGTTTTCCAGCACCGACAAGCCCACTCCTTTCCGAGATGC CTTGGAACAGTTGCAGGCTTTTCCGGAGCCGAGCAAAAACGCAGTGCACG ATATCTTCACAGTCCATCTCCTGCTAGCGGGCTCGGCGCTCTTACAGGAT CAGTTGCCCAGCGCTGGATCGGCCGCAGAGGAAGCTTTGGCATTTGTCGA GGTACGGCCAAGGCTTACGTAGCGGCACGCTATCAGCTGGCGCTCTATCA CATCGAAGCCGGGGAGTTCAAGCAAGCACATGCCTTGCTCCAGGCCCTGC TGGAGGATGTCCAGCGCGCCATCGAAGTTCTCGACACGAATATGGGCAAG GGGACTCTCCTCGCTGAAGATCAAGGATGCTGCTAAGCTACGCGAGGAGC ACCATTTTGTCCGAGCTCTCCCTTTGATGCAGATGTTATCATCGTGTGCC TCGGTATCATCTCGCATTGGTTATGCAGCGGCGGCATGTTCATTCAGGCC AGGATCGGTGCACGTCAGCAAAAGGCTCTTCTCGCCTCGCGTGGCTTCTT CGTCCTTCGCAACCCACGCATACCCCACTTCGTCTGCCTTTTCATTGCCC ACGCATGATTCATCGAAACAGTCGCGTGCTCATGATCTGCGCCGACGTCC TCACCGCATGATGAGCACTACGACTCCGCCGCCCCCGGGACAGGCGACCC AACAATCATTTTTCAATTCTCCGGCGACGGCGTCCTCGTTTTCCAGCACC GACAAGCCCACTCCTTTCCGAGATGCCTTGGAACAGTTGCAGGCTTTTCC GGAGCCGAGCAAAAACGCAGTGCACGATATCTTCACAGTCCATCTCCTGC TAGCGGGCTCGGCGCTCTTACAGGATCAGTTGCCCAGCGCTGGATCGGCC GCAGAGGAAGCTTTGGCATTTGTCGAGGTACGGCCAAGGCTTACGTAGCG GCACGCTATCAGCTGGCGCTCTATCACATCGAAGCCGGGGAGTTCAAGCA AGCACATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCCAGCGCGCCATCG AAGTTCTCGACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGATCAA GGATGCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCTT TGATGCAGATGTTATCATCGTGTGCCTCGGTATCATCTCGCATTGGTTAT GCAGCGGCGGCATGTTCATTCAGGCCAGGATCGGTGCACGTCAGCAAAAG GCTCTTCTCGCCTCGCGTGGCTTCTTCGTCCTTCGCAACCCACGCATACC CCACTTCGTCTGCCTTTTCATTGCCCACGCATGATTCATCGAAACAGTCG CGTGCTCATGATCTGCGCCGACGTCCTCACCGCATGATGAGCACTACGAC TCCGCCGCCCCCGGGACAGGCGACCCAACAATCATTTTTCAATTCTCCGG CGACGGCGTCCTCGTTTTCCAGCACCGACAAGCCCACTCCTTTCCGAGAT GCCTTGGAACAGTTGCAGGCTTTTCCGGAG back to top
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