EWM25996.1, cds4676 (CDS) Nannochloropsis gaditana

Overview
NameEWM25996.1
Unique Namecds4676
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:65088..65459 -
Alignment locationCM002464.1:64824..64886 -
Alignment locationCM002464.1:64596..64650 -
Alignment locationCM002464.1:64381..64472 -
Alignment locationCM002464.1:64069..64212 -

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Properties
Property NameValue
Protein idEWM25996.1
ProductTetratricopeptide-like helical
Orig transcript idgnl|cribi|Naga_100897g1.3247.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:65088..65459 -
CM002464.1supercontigCM002464.1:64824..64886 -
CM002464.1supercontigCM002464.1:64596..64650 -
CM002464.1supercontigCM002464.1:64381..64472 -
CM002464.1supercontigCM002464.1:64069..64212 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM25996.1 vs. NCBI_GenBank
Match: gi|585107904|gb|EWM25996.1| (Tetratricopeptide-like helical [Nannochloropsis gaditana])

HSP 1 Score: 485.723 bits (1249), Expect = 1.585e-173
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0 
Query:    1 MLSSCASVSSRIGYAAAACSFRPGSVHVSKRLFSPRVASSSFATHAYPTSSAFSLPTHDSSKQSRAHDLRRRPHRMMSTTTPPPPGQATQQSFFNSPATASSFSSTDKPTPFRDALEQLQAFPEIKDAAKLREEHHFVRALPLMQRAIEVLDTNMGKGTLLAEAARYQLALYHIEAGEFKQAHALLQALLEDVQPSKNAVHDIFTVHLLLAGSALLQDQLPSAGSAAEEALAFVEVRPRLT 241
            MLSSCASVSSRIGYAAAACSFRPGSVHVSKRLFSPRVASSSFATHAYPTSSAFSLPTHDSSKQSRAHDLRRRPHRMMSTTTPPPPGQATQQSFFNSPATASSFSSTDKPTPFRDALEQLQAFPEIKDAAKLREEHHFVRALPLMQRAIEVLDTNMGKGTLLAEAARYQLALYHIEAGEFKQAHALLQALLEDVQPSKNAVHDIFTVHLLLAGSALLQDQLPSAGSAAEEALAFVEVRPRLT
Sbjct:    1 MLSSCASVSSRIGYAAAACSFRPGSVHVSKRLFSPRVASSSFATHAYPTSSAFSLPTHDSSKQSRAHDLRRRPHRMMSTTTPPPPGQATQQSFFNSPATASSFSSTDKPTPFRDALEQLQAFPEIKDAAKLREEHHFVRALPLMQRAIEVLDTNMGKGTLLAEAARYQLALYHIEAGEFKQAHALLQALLEDVQPSKNAVHDIFTVHLLLAGSALLQDQLPSAGSAAEEALAFVEVRPRLT 241
The following BLAST results are available for this feature:
BLAST of EWM25996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107904|gb|EWM25996.1|1.585e-173100.00Tetratricopeptide-like helical [Nannochloropsis ga... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4688rna4688Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications