|
|
Properties
| Property Name | Value |
|---|
| Product | Tetratricopeptide-like helical |
| Orig transcript id | gnl|cribi|Naga_100897g1.3247.mrna |
| Orig protein id | gnl|cribi|Naga_100897g1.3247 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:63957..65732 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4688 ID=rna4688|Name=rna4688|organism=Nannochloropsis gaditana|type=mRNA|length=1075bp
CCCTCCTCCCCTCCCACTTTTTCTCCCTCCTGACCTCCCTTTTCCCTCCC
TTTGTATGCCCTGTCCTCTCCTCTTCTCCTCTCCTTTACTTGTTGTTTTG
TGGCCTGATTGCACACTGTACATTCATATATCTTGTCGTCCTTGCCCCCC
CTTCTCCCTCCCATTTTTTCTTAGGTCTATTTGGGGGATAAAGGTGGCGA
AGAGGGAGCTAAGCTCAAAGATCTGACCAAAATGGACGAAAACTTGTCCA
AGGCTCTGAAGCTCTACGAAAAGTATCTCTCCCCTTCGGATCCTCGTATG
GGCCAAGTGCTCGTGGCCATCGGGCAGCACCGGCACATGATTGGGCAAGC
TGTTTCCGCGGAGGGCCTTTTCCGCTCCGTCATCGACCTCCTATCGACGC
CTTCCGGCCTGGCCTCCCCACAACTGCGCTACTCGCTCTACAGGGCTTAC
TACGGCTACGGAAACCTGCTGGCGGATTGGGAAGGACGGGAGAGGGACGC
AGCCCACATGCGTGAAAAAGCGTCGCAGGTGAAGGTCCTCCGGCTCAATC
CCTACGTACCCCTGTCGCCCATGGTCTTTGTGGAGGGACAGGATCCGGGC
GAAGTGGACTATTTCTAGGGAAAGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAAATTATGGGGGCGGGGTTTGAGAAGGAGGTGTTGTAAGT
GTGTAGGTGAGGAGGGGTCAGGATCGGGTGGGGGGTCAATAGGAAAATCA
GATGAGACTTGAGGGACGATGTGTAGTGATTTCAACAGAAGCGGGAGGAA
ATGACAGAAGACGAGCCTGTGTATGAAGCAGGAAGGAAGGAGGATGGAAA
GAAGGGAGGGAGGAGGGCAAAAAGAGATGAAGAAAGCCATGGAGTGGCGA
CTGGAAAGATCAAGAAATCAAGAGAAAACTAAAATCGAAGCGTCGGCTGT
ATAAATCTCTGTTTTAAAAGAGTACGGGACGTATCAAAAAAGCGCTGTTT
GAGGTATTCTGGTCTGAGAGAGTTTTGGATGTCTCCTTGCATCCTGGCAC
GTCTACTCCACGAGCGCTGCCCCCC back to topprotein sequence of rna4688 >rna4688-protein ID=rna4688-protein|Name=rna4688|organism=Nannochloropsis gaditana|type=polypeptide|length=241bp
MLSSCASVSSRIGYAAAACSFRPGSVHVSKRLFSPRVASSSFATHAYPTS
SAFSLPTHDSSKQSRAHDLRRRPHRMMSTTTPPPPGQATQQSFFNSPATA
SSFSSTDKPTPFRDALEQLQAFPEIKDAAKLREEHHFVRALPLMQRAIEV
LDTNMGKGTLLAEAARYQLALYHIEAGEFKQAHALLQALLEDVQPSKNAV
HDIFTVHLLLAGSALLQDQLPSAGSAAEEALAFVEVRPRLT back to topmRNA from alignment at CM002464.1:63957..65732- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4688 ID=rna4688|Name=rna4688|organism=Nannochloropsis gaditana|type=mRNA|length=1776bp|location=Sequence derived from alignment at CM002464.1:63957..65732- (Nannochloropsis gaditana)
TGATACTAATATGCAGGCATAAAACAGCCCGACGATATCGTAAGATCTCT
CGAGTGAACCAGCGTACTATATGGATTGGGAACAGATGGAGCTAGGTTGG
GGTGTTTAGATATTATGTGGCGAATAGCATCAAAAAATGTAGTGAGGCAT
GTGGTTGAATCTTTTTGCTCTGCCTTGCTGTCCTTCATGTTCTGTTTGCT
GTCGCCCCACTTCTTGGCTTACGATCTCGTTTTTCCTGACTCACGACGAA
TCCCTTCTGCACATTTTTAGCCAATGTTATCATCGTGTGCCTCGGTATCA
TCTCGCATTGGTTATGCAGCGGCGGCATGTTCATTCAGGCCAGGATCGGT
GCACGTCAGCAAAAGGCTCTTCTCGCCTCGCGTGGCTTCTTCGTCCTTCG
CAACCCACGCATACCCCACTTCGTCTGCCTTTTCATTGCCCACGCATGAT
TCATCGAAACAGTCGCGTGCTCATGATCTGCGCCGACGTCCTCACCGCAT
GATGAGCACTACGACTCCGCCGCCCCCGGGACAGGCGACCCAACAATCAT
TTTTCAATTCTCCGGCGACGGCGTCCTCGTTTTCCAGCACCGACAAGCCC
ACTCCTTTCCGAGATGCCTTGGAACAGTTGCAGGCTTTTCCGGAGGTGCG
TGAATAGGACGAGAAGGGAGCATCGAGGCTCCAGCTGCCGGGAGACTCGG
CCAGCCTCGGCCGACGAAGATTCCCTTTTCTTCCTCCCTCTCCTGTTCTT
TCGTTGTCCCGGGGCATCATAATATGACCAACGTCTCTCCCAGTAACATC
AAATCACCACTCTTCCGTGGCGTCCTCTCTTTTCCCCCGCTCCTAGATCA
AGGATGCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCT
TTGATGCAGGTACGTCACAGAAGCGCATCTCGCATGACATACATACATGA
ACCTACAATAAAGGGACAGGTTCTTGAGACGTGCCCGTCCCATCCGAAGC
TCGCGATTTCAAAGTCTGGAGCTCATTTTTTTCCCCTCCTCCTTCGATCG
CCGCTCGATCGCATCCTCCTCCATGGTTGTAGCGCGCCATCGAAGTTCTC
GACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGGTAAGCAAAGGTC
ACTCTTCTCCGTTTTTTCTCAATTCCTCGTTCTTTGGTATCGTACCCTCA
CATCTTGTGTTATTACAATTTTAAACCGCCTCGCGCCCGACCCTAACGCT
CTTTATGCAGCGGCACGCTATCAGCTGGCGCTCTATCACATCGAAGCCGG
GGAGTTCAAGCAAGCACATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCC
AGGTGAGGGAGGGTGAAAGGGAAGGGGGGGCAGAAGAGATTCGGTTCCCA
CGGGGCGGGCGGAGAGAGGATACAGGCAGCAACTGTTTCGCTACGTCTCG
CCTTTCCTGCTTTTATGCCCTATCCTCTCCTCTCTTCTTCCCTCTATTGC
TTTCTTTCCATACCGTTCAGCCGAGCAAAAACGCAGTGCACGATATCTTC
ACAGTCCATCTCCTGCTAGCGGGCTCGGCGCTCTTACAGGATCAGTTGCC
CAGCGCTGGATCGGCCGCAGAGGAAGCTTTGGCATTTGTCGAGGTACGGC
CAAGGCTTACGTAGAAGGCGGTCGACAAGGGCAATGTCTGTCGTCTTGGG
GGGGCTGGAGGGTATCGCCGGGGGAGGGAGGGGGCGAGCGAAAAACTGGG
GGAGTCCCCATCTCACCCTCCCTCCC back to topCoding sequence (CDS) from alignment at CM002464.1:63957..65732- >rna4688 ID=rna4688|Name=rna4688|organism=Nannochloropsis gaditana|type=CDS|length=3630bp|location=Sequence derived from alignment at CM002464.1:63957..65732- (Nannochloropsis gaditana)
CCGAGCAAAAACGCAGTGCACGATATCTTCACAGTCCATCTCCTGCTAGC
GGGCTCGGCGCTCTTACAGGATCAGTTGCCCAGCGCTGGATCGGCCGCAG
AGGAAGCTTTGGCATTTGTCGAGGTACGGCCAAGGCTTACGTAGCGGCAC
GCTATCAGCTGGCGCTCTATCACATCGAAGCCGGGGAGTTCAAGCAAGCA
CATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCCAGCGCGCCATCGAAGT
TCTCGACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGATCAAGGAT
GCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCTTTGAT
GCAGATGTTATCATCGTGTGCCTCGGTATCATCTCGCATTGGTTATGCAG
CGGCGGCATGTTCATTCAGGCCAGGATCGGTGCACGTCAGCAAAAGGCTC
TTCTCGCCTCGCGTGGCTTCTTCGTCCTTCGCAACCCACGCATACCCCAC
TTCGTCTGCCTTTTCATTGCCCACGCATGATTCATCGAAACAGTCGCGTG
CTCATGATCTGCGCCGACGTCCTCACCGCATGATGAGCACTACGACTCCG
CCGCCCCCGGGACAGGCGACCCAACAATCATTTTTCAATTCTCCGGCGAC
GGCGTCCTCGTTTTCCAGCACCGACAAGCCCACTCCTTTCCGAGATGCCT
TGGAACAGTTGCAGGCTTTTCCGGAGCCGAGCAAAAACGCAGTGCACGAT
ATCTTCACAGTCCATCTCCTGCTAGCGGGCTCGGCGCTCTTACAGGATCA
GTTGCCCAGCGCTGGATCGGCCGCAGAGGAAGCTTTGGCATTTGTCGAGG
TACGGCCAAGGCTTACGTAGCGGCACGCTATCAGCTGGCGCTCTATCACA
TCGAAGCCGGGGAGTTCAAGCAAGCACATGCCTTGCTCCAGGCCCTGCTG
GAGGATGTCCAGCGCGCCATCGAAGTTCTCGACACGAATATGGGCAAGGG
GACTCTCCTCGCTGAAGATCAAGGATGCTGCTAAGCTACGCGAGGAGCAC
CATTTTGTCCGAGCTCTCCCTTTGATGCAGATGTTATCATCGTGTGCCTC
GGTATCATCTCGCATTGGTTATGCAGCGGCGGCATGTTCATTCAGGCCAG
GATCGGTGCACGTCAGCAAAAGGCTCTTCTCGCCTCGCGTGGCTTCTTCG
TCCTTCGCAACCCACGCATACCCCACTTCGTCTGCCTTTTCATTGCCCAC
GCATGATTCATCGAAACAGTCGCGTGCTCATGATCTGCGCCGACGTCCTC
ACCGCATGATGAGCACTACGACTCCGCCGCCCCCGGGACAGGCGACCCAA
CAATCATTTTTCAATTCTCCGGCGACGGCGTCCTCGTTTTCCAGCACCGA
CAAGCCCACTCCTTTCCGAGATGCCTTGGAACAGTTGCAGGCTTTTCCGG
AGCCGAGCAAAAACGCAGTGCACGATATCTTCACAGTCCATCTCCTGCTA
GCGGGCTCGGCGCTCTTACAGGATCAGTTGCCCAGCGCTGGATCGGCCGC
AGAGGAAGCTTTGGCATTTGTCGAGGTACGGCCAAGGCTTACGTAGCGGC
ACGCTATCAGCTGGCGCTCTATCACATCGAAGCCGGGGAGTTCAAGCAAG
CACATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCCAGCGCGCCATCGAA
GTTCTCGACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGATCAAGG
ATGCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCTTTG
ATGCAGATGTTATCATCGTGTGCCTCGGTATCATCTCGCATTGGTTATGC
AGCGGCGGCATGTTCATTCAGGCCAGGATCGGTGCACGTCAGCAAAAGGC
TCTTCTCGCCTCGCGTGGCTTCTTCGTCCTTCGCAACCCACGCATACCCC
ACTTCGTCTGCCTTTTCATTGCCCACGCATGATTCATCGAAACAGTCGCG
TGCTCATGATCTGCGCCGACGTCCTCACCGCATGATGAGCACTACGACTC
CGCCGCCCCCGGGACAGGCGACCCAACAATCATTTTTCAATTCTCCGGCG
ACGGCGTCCTCGTTTTCCAGCACCGACAAGCCCACTCCTTTCCGAGATGC
CTTGGAACAGTTGCAGGCTTTTCCGGAGCCGAGCAAAAACGCAGTGCACG
ATATCTTCACAGTCCATCTCCTGCTAGCGGGCTCGGCGCTCTTACAGGAT
CAGTTGCCCAGCGCTGGATCGGCCGCAGAGGAAGCTTTGGCATTTGTCGA
GGTACGGCCAAGGCTTACGTAGCGGCACGCTATCAGCTGGCGCTCTATCA
CATCGAAGCCGGGGAGTTCAAGCAAGCACATGCCTTGCTCCAGGCCCTGC
TGGAGGATGTCCAGCGCGCCATCGAAGTTCTCGACACGAATATGGGCAAG
GGGACTCTCCTCGCTGAAGATCAAGGATGCTGCTAAGCTACGCGAGGAGC
ACCATTTTGTCCGAGCTCTCCCTTTGATGCAGATGTTATCATCGTGTGCC
TCGGTATCATCTCGCATTGGTTATGCAGCGGCGGCATGTTCATTCAGGCC
AGGATCGGTGCACGTCAGCAAAAGGCTCTTCTCGCCTCGCGTGGCTTCTT
CGTCCTTCGCAACCCACGCATACCCCACTTCGTCTGCCTTTTCATTGCCC
ACGCATGATTCATCGAAACAGTCGCGTGCTCATGATCTGCGCCGACGTCC
TCACCGCATGATGAGCACTACGACTCCGCCGCCCCCGGGACAGGCGACCC
AACAATCATTTTTCAATTCTCCGGCGACGGCGTCCTCGTTTTCCAGCACC
GACAAGCCCACTCCTTTCCGAGATGCCTTGGAACAGTTGCAGGCTTTTCC
GGAGCCGAGCAAAAACGCAGTGCACGATATCTTCACAGTCCATCTCCTGC
TAGCGGGCTCGGCGCTCTTACAGGATCAGTTGCCCAGCGCTGGATCGGCC
GCAGAGGAAGCTTTGGCATTTGTCGAGGTACGGCCAAGGCTTACGTAGCG
GCACGCTATCAGCTGGCGCTCTATCACATCGAAGCCGGGGAGTTCAAGCA
AGCACATGCCTTGCTCCAGGCCCTGCTGGAGGATGTCCAGCGCGCCATCG
AAGTTCTCGACACGAATATGGGCAAGGGGACTCTCCTCGCTGAAGATCAA
GGATGCTGCTAAGCTACGCGAGGAGCACCATTTTGTCCGAGCTCTCCCTT
TGATGCAGATGTTATCATCGTGTGCCTCGGTATCATCTCGCATTGGTTAT
GCAGCGGCGGCATGTTCATTCAGGCCAGGATCGGTGCACGTCAGCAAAAG
GCTCTTCTCGCCTCGCGTGGCTTCTTCGTCCTTCGCAACCCACGCATACC
CCACTTCGTCTGCCTTTTCATTGCCCACGCATGATTCATCGAAACAGTCG
CGTGCTCATGATCTGCGCCGACGTCCTCACCGCATGATGAGCACTACGAC
TCCGCCGCCCCCGGGACAGGCGACCCAACAATCATTTTTCAATTCTCCGG
CGACGGCGTCCTCGTTTTCCAGCACCGACAAGCCCACTCCTTTCCGAGAT
GCCTTGGAACAGTTGCAGGCTTTTCCGGAG back to top
|