rna4667, rna4667 (mRNA) Nannochloropsis gaditana

Overview
Namerna4667
Unique Namerna4667
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length773
Alignment locationCM002464.1:12828..14412 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100150g4.10684.mrna
Orig protein idgnl|cribi|Naga_100150g4.10684
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:12828..14412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100150g4gene4505Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4667rna4667-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26008.1cds4655Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4667 ID=rna4667|Name=rna4667|organism=Nannochloropsis gaditana|type=mRNA|length=773bp
GGCCTCACCATAGTGGAGCCGAGGGCTAGTATTACGATGTTTGGCCGCAT
TCTATTCGTCAGACATCTGTCTTTATTTCTTTGCACATGGTTGAGCTTCG
TTCTCAAGTCCTGCTTCGAGACGTCGTCATACGCATACACAGGGCAGCTG
AGGGGCCTTGCATGTCCTTTGTGACCTTTTAACAGTACTCCTAAAACAAT
GCCAAAAAGCATGCAGTGACTTTGTTAATGATCTTTTTGGAGCAGTGGTG
CTTCTCTATGGCGTGATAACGACATCCTCTTGTCGCCATCGTTTCTCACG
CAAACCTCCTTCCTCAGCTCTTGGGACAGGCCTTGACACTTGAAAGTATG
TCAGGAGGGGGCCCAGTCTTGAAGCCTTCGACACTGCGAGCGTGGAAAGT
GGCAACGGGCGTTATTTGTCTTGTCACGGGCTTCCAACTAGTCTTTCTGA
CAGACTATGGGGACAAAGAGCATGTCTTTACACCGATTCAGCGGTGGTAC
ATGGGTCAATTGGATAGCTTGCTCGGTGTCGAGAGTGAAGTAGCCCGCCG
GCTCAGGACCCCCACGTTCAGCCTCAATTCTTCCAAAGAGGCAGAAGAGA
GTGCACGCGCTGCCACTGCGGCTCCACAACCAGACGTCAATTTGTCACAC
TCCCCCTCTATGCCCGCGAAGGCGGGGGAGGGAGTTAGGGAAGGAAGGGA
ATCGGGTGGATGGAGAAGATGGATATCCTGGTGGTAAAAATAAGCGAGGC
ATACATACATACGTGCATTTTCC
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protein sequence of rna4667

>rna4667-protein ID=rna4667-protein|Name=rna4667|organism=Nannochloropsis gaditana|type=polypeptide|length=198bp
MCGGFFSLSCGALSLKVVTTLLWAICRFHACDRGSNQLELSDTATIERSG
RRNARCYFISRLGVNIHHSRIRDSCRGVNNSCHGPGLYLFREASISRTPP
AFRENGGGQNHRKGLVRLSHEANGRARAGEGSNRVRKGKFLRKIRDTHRN
VQLKMQQGVIIDDQACSEHVRGEREWRVSVGSGLRAEGGHIWDKCPEK
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mRNA from alignment at CM002464.1:12828..14412-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4667 ID=rna4667|Name=rna4667|organism=Nannochloropsis gaditana|type=mRNA|length=1585bp|location=Sequence derived from alignment at CM002464.1:12828..14412- (Nannochloropsis gaditana)
ATGTGCGGCGGATTCTTCTCGTTGTCGTGCGGCGCCCTGGTATGCATGTG
CTTCGCAGAAGAGAGGTTTGAAAATAGTGCCAAAGCATACCGAACTCTAC
GGAATAGAAATGCACAAGCTGGCTGGCCACAGCACATGTTTTTTCGCGCG
AGTACTTTCGCTGCCCTCCTTTAACCTCTTGTCCATTTCTGTAGTCCTTG
AAGGTTGTCACGACGCTCTTATGGGCTATATGTCGCTTCCATGCGTGTGA
CAGGGTACGAACACTCAGGAATTAAACTTATTTATGGGAAAGTCTACCAA
GAGATCGGGAATGTGATTTTTAATATGTCAGCAATAGGAGATAAAAAGAC
ACTTCAACTTTCCTCAAAGCTCGTGTACAAGGCTGTAGATGAAACCTAGG
CAAAGCTCCTGCAAGGAAAATAAAAATTCAGTATTTCGCATTTCTTTCCA
GCTTGACGTGCATAGCATTGATGTCCTTATTTTCCTTTCACTTCCCTCAA
ACAACTCCAGGGAAGCAACCAACTAGAGCTGTCGGACACAGCAACAATAG
AAAGGAGCGGCAGAAGAAATGCTCGATGCTATTTCATATCTCGTCTGGGG
GTTAATATACATCATAGCAGGATTCGGGATTCTTGCCGTGGGGTCAATAA
TTCTTGTGTAAGTGTACCTTCCATACGGCATGGGTCGAAGGTGTATCGTT
CTGTCACATGAAGCCTTTCTCCCCCTGGTCGATTTAAAGCTTCTTTTCTC
TTAAAGTGTGTGTGTGTGTTTTGGGCTCAGTGATCGTCGCTACCGGTCTA
TAAACCATTTCTTCTTTGTCAAATGCCTCTGAATAGCATGGTCCGGGCTT
GTATCTCTTCCGGGAAGCTTCTATTTCTCGGACCCCCCCTGCGTTTCGGG
AAAATGGAGGCGGCCAAAACCACCGAAAGTTTGCGCCACGCGAAGCAAGG
GGTGGACGTGGACAGAGGAGGCGACAGAGAGGCAGTGAGGGAGGGCGGGC
AGGGGGCTCAGTCGGCGTCGAGGGAGAATACCGAGGAGCTCGAAGACGCA
GAGAGTGGAAGCGCTGAGGAGGTGGCGTCGAGAGGGTTGAGGCCAGCAAG
ATGTGACGAAGGTCAAATAGAGGCGAGGGTTGACGAGGGCCTGGAAAGAT
GGAGCATGAATGTTGGGGTGCCTTCCCAGTAAGCAAGAGGGATACAGAGG
GGTCAGGGGGGAGGGAGGTGTCGTGGAAAGTAGCGCGTTGCATGGAGAAA
TAAAACGGGACAGGAAAAACAAAGGGAGAGGGGAGGGGCAGGAATCGAAG
ACTTTCGACCTCGCAGCGAAAGTCAGGGGCCTGGTGCGGCTTTCTCACGA
GGCGAATGGGCGGGCGAGGGCAGGAGAGGGCTCGAATCGTGTGCGTAAAG
GGAAATTTTTACGAAAAATTAGGGATACACATAGAAATGTACAGCTAAAA
ATGCAACAGGGTGTGATTATTGACGACCAAGCTTGTAGCGAGCATGTAAG
AGGCGAACGGGAGTGGAGAGTGTCAGTAGGGTCGGGACTAAGAGCAGAGG
GAGGTCATATATGGGACAAATGCCCCGAAAAGTAA
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Coding sequence (CDS) from alignment at CM002464.1:12828..14412-

>rna4667 ID=rna4667|Name=rna4667|organism=Nannochloropsis gaditana|type=CDS|length=2985bp|location=Sequence derived from alignment at CM002464.1:12828..14412- (Nannochloropsis gaditana)
GGGCCTGGTGCGGCTTTCTCACGAGGCGAATGGGCGGGCGAGGGCAGGAG
AGGGCTCGAATCGTGTGCGTAAAGGGAAATTTTTACGAAAAATTAGGGAT
ACACATAGAAATGTACAGCTAAAAATGCAACAGGGTGTGATTATTGACGA
CCAAGCTTGTAGCGAGCATGTAAGAGGCGAACGGGAGTGGAGAGTGTCAG
TAGGGTCGGGACTAAGAGCAGAGGGAGGTCATATATGGGACAAATGCCCC
GAAAAGTAACATGGTCCGGGCTTGTATCTCTTCCGGGAAGCTTCTATTTC
TCGGACCCCCCCTGCGTTTCGGGAAAATGGAGGCGGCCAAAACCACCGAA
AGGAAGCAACCAACTAGAGCTGTCGGACACAGCAACAATAGAAAGGAGCG
GCAGAAGAAATGCTCGATGCTATTTCATATCTCGTCTGGGGGTTAATATA
CATCATAGCAGGATTCGGGATTCTTGCCGTGGGGTCAATAATTCTTGTTC
CTTGAAGGTTGTCACGACGCTCTTATGGGCTATATGTCGCTTCCATGCGT
GTGACAGGATGTGCGGCGGATTCTTCTCGTTGTCGTGCGGCGCCCTGGGG
CCTGGTGCGGCTTTCTCACGAGGCGAATGGGCGGGCGAGGGCAGGAGAGG
GCTCGAATCGTGTGCGTAAAGGGAAATTTTTACGAAAAATTAGGGATACA
CATAGAAATGTACAGCTAAAAATGCAACAGGGTGTGATTATTGACGACCA
AGCTTGTAGCGAGCATGTAAGAGGCGAACGGGAGTGGAGAGTGTCAGTAG
GGTCGGGACTAAGAGCAGAGGGAGGTCATATATGGGACAAATGCCCCGAA
AAGTAACATGGTCCGGGCTTGTATCTCTTCCGGGAAGCTTCTATTTCTCG
GACCCCCCCTGCGTTTCGGGAAAATGGAGGCGGCCAAAACCACCGAAAGG
AAGCAACCAACTAGAGCTGTCGGACACAGCAACAATAGAAAGGAGCGGCA
GAAGAAATGCTCGATGCTATTTCATATCTCGTCTGGGGGTTAATATACAT
CATAGCAGGATTCGGGATTCTTGCCGTGGGGTCAATAATTCTTGTTCCTT
GAAGGTTGTCACGACGCTCTTATGGGCTATATGTCGCTTCCATGCGTGTG
ACAGGATGTGCGGCGGATTCTTCTCGTTGTCGTGCGGCGCCCTGGGGCCT
GGTGCGGCTTTCTCACGAGGCGAATGGGCGGGCGAGGGCAGGAGAGGGCT
CGAATCGTGTGCGTAAAGGGAAATTTTTACGAAAAATTAGGGATACACAT
AGAAATGTACAGCTAAAAATGCAACAGGGTGTGATTATTGACGACCAAGC
TTGTAGCGAGCATGTAAGAGGCGAACGGGAGTGGAGAGTGTCAGTAGGGT
CGGGACTAAGAGCAGAGGGAGGTCATATATGGGACAAATGCCCCGAAAAG
TAACATGGTCCGGGCTTGTATCTCTTCCGGGAAGCTTCTATTTCTCGGAC
CCCCCCTGCGTTTCGGGAAAATGGAGGCGGCCAAAACCACCGAAAGGAAG
CAACCAACTAGAGCTGTCGGACACAGCAACAATAGAAAGGAGCGGCAGAA
GAAATGCTCGATGCTATTTCATATCTCGTCTGGGGGTTAATATACATCAT
AGCAGGATTCGGGATTCTTGCCGTGGGGTCAATAATTCTTGTTCCTTGAA
GGTTGTCACGACGCTCTTATGGGCTATATGTCGCTTCCATGCGTGTGACA
GGATGTGCGGCGGATTCTTCTCGTTGTCGTGCGGCGCCCTGGGGCCTGGT
GCGGCTTTCTCACGAGGCGAATGGGCGGGCGAGGGCAGGAGAGGGCTCGA
ATCGTGTGCGTAAAGGGAAATTTTTACGAAAAATTAGGGATACACATAGA
AATGTACAGCTAAAAATGCAACAGGGTGTGATTATTGACGACCAAGCTTG
TAGCGAGCATGTAAGAGGCGAACGGGAGTGGAGAGTGTCAGTAGGGTCGG
GACTAAGAGCAGAGGGAGGTCATATATGGGACAAATGCCCCGAAAAGTAA
CATGGTCCGGGCTTGTATCTCTTCCGGGAAGCTTCTATTTCTCGGACCCC
CCCTGCGTTTCGGGAAAATGGAGGCGGCCAAAACCACCGAAAGGAAGCAA
CCAACTAGAGCTGTCGGACACAGCAACAATAGAAAGGAGCGGCAGAAGAA
ATGCTCGATGCTATTTCATATCTCGTCTGGGGGTTAATATACATCATAGC
AGGATTCGGGATTCTTGCCGTGGGGTCAATAATTCTTGTTCCTTGAAGGT
TGTCACGACGCTCTTATGGGCTATATGTCGCTTCCATGCGTGTGACAGGA
TGTGCGGCGGATTCTTCTCGTTGTCGTGCGGCGCCCTGGGGCCTGGTGCG
GCTTTCTCACGAGGCGAATGGGCGGGCGAGGGCAGGAGAGGGCTCGAATC
GTGTGCGTAAAGGGAAATTTTTACGAAAAATTAGGGATACACATAGAAAT
GTACAGCTAAAAATGCAACAGGGTGTGATTATTGACGACCAAGCTTGTAG
CGAGCATGTAAGAGGCGAACGGGAGTGGAGAGTGTCAGTAGGGTCGGGAC
TAAGAGCAGAGGGAGGTCATATATGGGACAAATGCCCCGAAAAGTAACAT
GGTCCGGGCTTGTATCTCTTCCGGGAAGCTTCTATTTCTCGGACCCCCCC
TGCGTTTCGGGAAAATGGAGGCGGCCAAAACCACCGAAAGGAAGCAACCA
ACTAGAGCTGTCGGACACAGCAACAATAGAAAGGAGCGGCAGAAGAAATG
CTCGATGCTATTTCATATCTCGTCTGGGGGTTAATATACATCATAGCAGG
ATTCGGGATTCTTGCCGTGGGGTCAATAATTCTTGTTCCTTGAAGGTTGT
CACGACGCTCTTATGGGCTATATGTCGCTTCCATGCGTGTGACAGGATGT
GCGGCGGATTCTTCTCGTTGTCGTGCGGCGCCCTG
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Synonyms
Publications