EWM26008.1, cds4655 (CDS) Nannochloropsis gaditana

Overview
NameEWM26008.1
Unique Namecds4655
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:14374..14412 -
Alignment locationCM002464.1:14159..14218 -
Alignment locationCM002464.1:13756..13902 -
Alignment locationCM002464.1:13485..13576 -
Alignment locationCM002464.1:12828..13086 -

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Properties
Property NameValue
Protein idEWM26008.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100150g4.10684.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:14374..14412 -
CM002464.1supercontigCM002464.1:14159..14218 -
CM002464.1supercontigCM002464.1:13756..13902 -
CM002464.1supercontigCM002464.1:13485..13576 -
CM002464.1supercontigCM002464.1:12828..13086 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26008.1 vs. NCBI_GenBank
Match: gi|585107923|gb|EWM26008.1| (hypothetical protein Naga_100150g4 [Nannochloropsis gaditana])

HSP 1 Score: 404.831 bits (1039), Expect = 8.186e-143
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0 
Query:    1 MCGGFFSLSCGALSLKVVTTLLWAICRFHACDRGSNQLELSDTATIERSGRRNARCYFISRLGVNIHHSRIRDSCRGVNNSCHGPGLYLFREASISRTPPAFRENGGGQNHRKGLVRLSHEANGRARAGEGSNRVRKGKFLRKIRDTHRNVQLKMQQGVIIDDQACSEHVRGEREWRVSVGSGLRAEGGHIWDKCPEK 198
            MCGGFFSLSCGALSLKVVTTLLWAICRFHACDRGSNQLELSDTATIERSGRRNARCYFISRLGVNIHHSRIRDSCRGVNNSCHGPGLYLFREASISRTPPAFRENGGGQNHRKGLVRLSHEANGRARAGEGSNRVRKGKFLRKIRDTHRNVQLKMQQGVIIDDQACSEHVRGEREWRVSVGSGLRAEGGHIWDKCPEK
Sbjct:    1 MCGGFFSLSCGALSLKVVTTLLWAICRFHACDRGSNQLELSDTATIERSGRRNARCYFISRLGVNIHHSRIRDSCRGVNNSCHGPGLYLFREASISRTPPAFRENGGGQNHRKGLVRLSHEANGRARAGEGSNRVRKGKFLRKIRDTHRNVQLKMQQGVIIDDQACSEHVRGEREWRVSVGSGLRAEGGHIWDKCPEK 198
The following BLAST results are available for this feature:
BLAST of EWM26008.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107923|gb|EWM26008.1|8.186e-143100.00hypothetical protein Naga_100150g4 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4667rna4667Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications