EWM26024.1, cds4644 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|585107941|gb|EWM26024.1| (uncharacterized protein Naga_100629g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 304.679 bits (779), Expect = 7.728e-105 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query: 1 PPSLPSSLPRQGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKDNTGKLGREGMGTQGLGSDRHGQVSFQFGFFSDVG 150
PPSLPSSLPRQGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKDNTGKLGREGMGTQGLGSDRHGQVSFQFGFFSDVG
Sbjct: 1 PPSLPSSLPRQGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKDNTGKLGREGMGTQGLGSDRHGQVSFQFGFFSDVG 150
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|553176994|ref|XP_005852424.1| (hypothetical protein NGA_0694400 [Nannochloropsis gaditana CCMP526] >gi|422296109|gb|EKU23408.1| hypothetical protein NGA_0694400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 281.952 bits (720), Expect = 2.237e-95 Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
Query: 8 LPRQGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKDNTGKLGREGMGTQGLGSDRHGQVSFQFGFFSDVG 150
+PR GWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKD+TGKLGREGMGTQGLGSDRHGQVSFQFGFFSDVG
Sbjct: 43 VPR-GWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKDSTGKLGREGMGTQGLGSDRHGQVSFQFGFFSDVG 184
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|673043693|ref|XP_008875807.1| (hypothetical protein H310_11044 [Aphanomyces invadans] >gi|574468596|gb|ETV95614.1| hypothetical protein H310_11044 [Aphanomyces invadans]) HSP 1 Score: 93.2041 bits (230), Expect = 2.342e-19 Identity = 55/139 (39.57%), Postives = 75/139 (53.96%), Query Frame = 0
Query: 8 LPRQGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGV-PEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGGKDNTGKLGREGMGTQGLGSDRHGQVSFQFGF 145
+PR GWWH+V+NL+ESLAITQNYVS SN+ HVL+FL D P +SG+ E +RPLLYA+FR AL + +P+ + + R + W+++V T E+G HG F FGF
Sbjct: 394 VPR-GWWHIVLNLDESLAITQNYVSPSNVQHVLAFLHDKPDQVSGLDDETKRPLLYAKFRAALEKHHPEFVATFDESRR-----PTHPKKATWASLVQSTVPAEDGNA---------------------HGAAPFSFGF 505
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|1173943094|gb|OQR91992.1| (histone arginine demethylase [Thraustotheca clavata]) HSP 1 Score: 90.1225 bits (222), Expect = 3.747e-18 Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 0
Query: 11 QGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQE 79
+GWWHLV+N+EE LAITQN+V S+L LSFL D P +SGVPE ERP LY +FR+ L++ +P+++ E
Sbjct: 367 KGWWHLVLNIEECLAITQNFVCKSSLMDTLSFLTDKPDQVSGVPEEERPKLYNKFRKVLQDKHPELVNE 435
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|698792164|ref|XP_009829114.1| (hypothetical protein H257_05819 [Aphanomyces astaci] >gi|574115771|gb|ETV81256.1| hypothetical protein H257_05819 [Aphanomyces astaci]) HSP 1 Score: 88.9669 bits (219), Expect = 8.890e-18 Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 0
Query: 8 LPRQGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGV-PEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSAVVGRTHCREEGGG 114
+PR GWWH+V+NL+ESLAITQNYVS SN+ VL FL D P +SG+ E +RPLLYA+FR AL +P+++ + R++ + W+++V + E+G
Sbjct: 396 VPR-GWWHIVLNLDESLAITQNYVSPSNVQQVLEFLHDKPDQVSGLDDETKRPLLYAKFRAALELHHPEIVATFDESRRQKPKKSK------WASLVIGSTTDEDGAS 496
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|1173948050|gb|OQR96208.1| (histone arginine demethylase [Achlya hypogyna]) HSP 1 Score: 84.3445 bits (207), Expect = 2.694e-16 Identity = 37/69 (53.62%), Postives = 52/69 (75.36%), Query Frame = 0
Query: 11 QGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLRDTPHLISGVPEAERPLLYARFREALRESYPQVLQE 79
+GWWHLV+N EE LAITQN+V S+L L+FL+D P +SGV E +RPLLY +FR+ L++++P + E
Sbjct: 380 KGWWHLVLNTEECLAITQNFVCGSSLMDTLAFLKDKPDQVSGVDEDQRPLLYGKFRKVLQDAHPDRVAE 448
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|685379052|ref|XP_009122265.1| (PREDICTED: F-box protein At5g06550 [Brassica rapa]) HSP 1 Score: 83.1889 bits (204), Expect = 8.511e-16 Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 0
Query: 11 QGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLR--DTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSA 101
GWWHLV+NLEES+AITQNYVS NL +VL FL+ + L+SG + E L+ +F EA+ E+YP +QE E K E+ AE E+ W A
Sbjct: 410 NGWWHLVINLEESIAITQNYVSRRNLLNVLEFLKKPNAKELVSGTNDREN--LHDKFNEAIEEAYPGTIQELEKKAEEKRIAE-EQKVTFWDA 499
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|674963860|emb|CDX70092.1| (BnaA10g24410D [Brassica napus]) HSP 1 Score: 82.8037 bits (203), Expect = 1.221e-15 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0
Query: 11 QGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLR--DTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSA 101
GWWHLV+NLEES+AITQNYVS NL +VL FL+ + L+SG + E L+ +F++A+ E+YP +QE E K E+ AE E+ W A
Sbjct: 387 NGWWHLVINLEESIAITQNYVSRRNLLNVLEFLKKPNAKELVSGTNDREN--LHDKFKKAIEEAYPGTIQELEKKAEEKRIAE-EQKVTFWDA 476
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|1072991943|ref|XP_018446739.1| (PREDICTED: F-box protein At5g06550 [Raphanus sativus]) HSP 1 Score: 82.8037 bits (203), Expect = 1.250e-15 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0
Query: 11 QGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLR--DTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSA 101
GWWHLV+NLEES+AITQNYVS NL +VL FL+ + L+SG + E L+ +F++A+ E+YP +QE E K E+ AE E+ W A
Sbjct: 406 NGWWHLVINLEESIAITQNYVSRRNLLNVLEFLKKPNAKELVSGTNDREN--LHDKFKKAIEEAYPGTIQELEKKAEEKRRAE-EQKVTFWDA 495
BLAST of EWM26024.1 vs. NCBI_GenBank
Match: gi|923888558|ref|XP_013715519.1| (PREDICTED: F-box protein At5g06550-like [Brassica napus]) HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15 Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0
Query: 11 QGWWHLVVNLEESLAITQNYVSLSNLPHVLSFLR--DTPHLISGVPEAERPLLYARFREALRESYPQVLQEAEGKPRERAGAEREEGRQGWSA 101
GWWHLV+NLEES+AITQNYVS NL +VL FL+ + L+SG + E L+ +F++A+ E+YP +QE E K E+ AE E+ W A
Sbjct: 403 NGWWHLVINLEESIAITQNYVSRRNLLNVLEFLKKPNAKELVSGTNDREN--LHDKFKKAIEEAYPGTIQELEKKAEEKRIAE-EQKVTFWDA 492 The following BLAST results are available for this feature:
BLAST of EWM26024.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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