EWM26122.1, cds4572 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|585108115|gb|EWM26121.1| (farnesyltransferase beta subunit [Nannochloropsis gaditana]) HSP 1 Score: 892.878 bits (2306), Expect = 0.000e+0 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0 Query: 1 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 428 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL Sbjct: 73 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 500
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|585108116|gb|EWM26122.1| (farnesyltransferase beta subunit [Nannochloropsis gaditana]) HSP 1 Score: 890.182 bits (2299), Expect = 0.000e+0 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0 Query: 1 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 428 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL Sbjct: 1 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 428
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|1205944321|ref|XP_002458458.2| (protein farnesyltransferase subunit beta isoform X1 [Sorghum bicolor] >gi|1174561094|gb|OQU87492.1| hypothetical protein SORBI_3003G289400 [Sorghum bicolor]) HSP 1 Score: 323.168 bits (827), Expect = 8.048e-103 Identity = 187/419 (44.63%), Postives = 241/419 (57.52%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALH-GETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPL-VYGDIGNLLEITNPIYNIRQDKVDRALRFFYRE 418 +GL HLGP F LDA+RPWLCYW++H L LL +L + + CQ+ GG+ GGP Q+ H A TYAAV L+ +G+E A +I+R LYK+ L K +SG F MHD GE+DVR +YT IS+AS++N+L +LA GV +Y+ SCQTYEGG GE EAHGGY FC AALI+L+E + VDL SL GW+A RQ VE GFQGRTNKLVDGCYSFWQGA L + L + + + ++ + G C+ SY G + K+F D V I+ S +G + ALQ+YIL C+Q L+GG RDKP K RD YH+CY LSGLS Q+ + + C P V G NLLE +P+YN+ DK A FF +E Sbjct: 107 RGLRHLGPAFHVLDANRPWLCYWMVHPLALL-------DEALDDNLEDDIIDFLARCQDKDGGYSGGPGQLPHLATTYAAVNTLVTIGSERALSSINRGNLYKFMLRMKDVSGAFRMHDGGEIDVRASYTAISVASLVNILDVELAKGVGDYIASCQTYEGGIAGEPYAEAHGGYTFCGLAALILLNEAEKVDLPSLIGWVAFRQ-GVECGFQGRTNKLVDGCYSFWQGAAIALTQKLLTIVDKQLKSSYSCKRPSGGDA--CSTSSY-------GCTAKNFSSAVDYAKV---------GFDFIQQSNQIGPLFHNI---ALQQYILLCSQVLEGGFRDKPGKNRDHYHSCYCLSGLSVCQYSALTD---------ADSCPLPQHVLGPYSNLLEPIHPLYNVVLDKYHTAYDFFSKE 487
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|1205944323|ref|XP_021312379.1| (protein farnesyltransferase subunit beta isoform X2 [Sorghum bicolor] >gi|1174561093|gb|OQU87491.1| hypothetical protein SORBI_3003G289400 [Sorghum bicolor]) HSP 1 Score: 319.316 bits (817), Expect = 2.202e-101 Identity = 187/419 (44.63%), Postives = 243/419 (58.00%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALH-GETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPL-VYGDIGNLLEITNPIYNIRQDKVDRALRFFYRE 418 +GL HLGP F LDA+RPWLCYW++H L LL +L + + CQ+ GG+ GGP Q+ H A TYAAV L+ +G+E A +I+R LYK+ L K +SG F MHD GE+DVR +YT IS+AS++N+L +LA GV +Y+ SCQTYEGG GE EAHGGY FC AALI+L+E + VDL SL GW+A RQ VE GFQGRTNKLVDGCYSFWQGA L + L + + + ++ + G C+ SY G + K+F ++D V I+ S +G + ALQ+YIL C+Q L+GG RDKP K RD YH+CY LSGLS Q+ + + C P V G NLLE +P+YN+ DK A FF +E Sbjct: 107 RGLRHLGPAFHVLDANRPWLCYWMVHPLALL-------DEALDDNLEDDIIDFLARCQDKDGGYSGGPGQLPHLATTYAAVNTLVTIGSERALSSINRGNLYKFMLRMKDVSGAFRMHDGGEIDVRASYTAISVASLVNILDVELAKGVGDYIASCQTYEGGIAGEPYAEAHGGYTFCGLAALILLNEAEKVDLPSLIGWVAFRQ-GVECGFQGRTNKLVDGCYSFWQGAAIALTQKLLTIVDKQLKSSYSCKRPSGGDA--CSTSSY-------GCTAKNF--SSDYAKV---------GFDFIQQSNQIGPLFHNI---ALQQYILLCSQVLEGGFRDKPGKNRDHYHSCYCLSGLSVCQYSALTD---------ADSCPLPQHVLGPYSNLLEPIHPLYNVVLDKYHTAYDFFSKE 485
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|953491778|emb|CEG45787.1| (farnesyltransferase beta subunit [Plasmopara halstedii]) HSP 1 Score: 314.309 bits (804), Expect = 2.888e-100 Identity = 189/422 (44.79%), Postives = 237/422 (56.16%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGG--PYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHL-SGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFS-LQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREG 419 +GLT L GF+ LDASRPW+ YWILH+L+LL L ++ +V T+ C N G G P Q+ H A YA+ L L +LGT +A +++DR +LY++F++RKH +G F HD GEVDVR TY VISIAS+ +LT +L AGVV+Y+LSCQTYEGGFGGE EAHGGY FC+ A L IL D + FS L W+A RQM EGG+QGRTNKLVDGCYSFWQGA L+ +E R+ FGD + P + CH + LQRYIL C Q + GGLRDKP KPRD YHTCY LSGLS AQ+G + R G P+V+GD NL+ T+P YNI DKV +A+ +F +G Sbjct: 78 RGLTRLSAGFVTLDASRPWIIYWILHALELLDALPD--------EMTERVIGTLKPCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTLDALESVDRLSLYRFFMSRKHAATGAFMAHDGGEVDVRVTYCVISIASLYGILTDELKAGVVDYILSCQTYEGGFGGEPGNEAHGGYAFCSVATLYILEAVDQIRDFSGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAIPALLA------SEVRR--------------------------------RFGD------IVPYQ-------------CH---------REQLQRYILLCGQEISGGLRDKPGKPRDHYHTCYCLSGLSVAQYG---------DGR-----GSPVVFGDASNLVARTHPAYNISYDKVIKAIEYFKSKG 411
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|1050646937|ref|XP_017646788.1| (PREDICTED: protein farnesyltransferase subunit beta [Gossypium arboreum]) HSP 1 Score: 315.464 bits (807), Expect = 3.293e-100 Identity = 185/429 (43.12%), Postives = 238/429 (55.48%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYT--EDLRDSGVSG--------KDFGD---TTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 417 KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG E+A +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL L W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ E + + E G +PQ+ T + + G++G + GD T+ +V + N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 53 KGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELEDNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGEKALSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDSLDLSGLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLKR-LNSTKEVKPIPLGDGEGSGEE---SPQTTTSSDAAGEEGLNGDLSLGGSHSEIGDQHNTSSQDNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYREAYEFFTK 452
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|1029008830|ref|XP_016668301.1| (PREDICTED: protein farnesyltransferase subunit beta-like [Gossypium hirsutum]) HSP 1 Score: 314.309 bits (804), Expect = 7.986e-100 Identity = 184/429 (42.89%), Postives = 235/429 (54.78%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYT-------EDLRDSGVSGKDFGDTTDLRSVCPRETAMKSD------MPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 417 KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG ++A +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL SL W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ E + + E G +PQ+ T E L G + D + ++ + D N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 53 KGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELENNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGDKALSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDRLDLSSLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLKR-LNSTKEVKPIPLGDGEGSGEE---SPQTTTSSDAAGEEGLNGDLSLGGSHSEIGDQHNTSSQDNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYRDAYEFFTK 452
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|823167845|ref|XP_012483791.1| (PREDICTED: protein farnesyltransferase subunit beta [Gossypium raimondii] >gi|763766544|gb|KJB33759.1| hypothetical protein B456_006G029800 [Gossypium raimondii]) HSP 1 Score: 312.383 bits (799), Expect = 4.747e-99 Identity = 186/430 (43.26%), Postives = 236/430 (54.88%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQS-----------YTEDLRDSGVSGKDFGDTTDLRS---VCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 417 KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG ++A+ +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL SL W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ + + E G +PQ+ EDL G S + GD + S V + N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 53 KGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELEDNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGDKAFSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDRLDLSSLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLKR-LNSTKGVKPIPLGDGEGSGEE---SPQTTASSDAAGEEGLNEDLSLGG-SHSEIGDQNNTSSQVNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYRGAHEFFTK 452
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|222619220|gb|EEE55352.1| (hypothetical protein OsJ_03383 [Oryza sativa Japonica Group]) HSP 1 Score: 310.842 bits (795), Expect = 3.571e-98 Identity = 192/417 (46.04%), Postives = 242/417 (58.03%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTT-DLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQM-DSLKESKNARGLNPCGHPL-VYGDIGNLLEITNPIYNIRQDKVDRALRFF 415 +GL HLGP F LDA+RPWLCYWI+H+L LL + D+ + ++ CQ+ GG+GGGP Q+ H A TYAAV L+ +G+E A +++R LYK+ L K SG F MHD GE+DVR +YT IS+AS++N+L +LA GV Y+ CQTYEGG GE EAHGGY FC A +I+L+E D +DL SL GW+A RQ VE GFQGRTNKLVDGCYSFWQ AI V L T + K++ + + + E L+ S S + GD S K IE S +G + ALQ+YIL CAQ LDGGLRDKP K RD YH+CY LSGLS +Q+ M DS + C P V G NLLE +P+YN+ DK A FF Sbjct: 79 RGLKHLGPSFHVLDANRPWLCYWIIHALALLDEIPD--------DVEDDIVDFLSRCQDKDGGYGGGPGQLPHLATTYAAVNTLVTIGSERALSSVNRDNLYKFMLRMKDTSGAFRMHDGGEIDVRASYTAISVASLVNILDGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYTFCGLATMILLNEVDKLDLASLIGWVAFRQ-GVECGFQGRTNKLVDGCYSFWQ-VNAIPVFFFLASSTLSDKLLVYDQGAALALTQKLMTVVDEQLKSSYSSKRPPGDDACGTSSSTEAAYYAKFGFDFIEKSNQIGPLFHNI---ALQQYILLCAQVLDGGLRDKPGKNRDHYHSCYCLSGLSVSQYSAMVDS----------DACPLPQHVLGPYSNLLEPIHPLYNVVLDKYHTAYEFF 472
BLAST of EWM26122.1 vs. NCBI_GenBank
Match: gi|1029017973|ref|XP_016672814.1| (PREDICTED: protein farnesyltransferase subunit beta-like isoform X2 [Gossypium hirsutum]) HSP 1 Score: 309.686 bits (792), Expect = 5.509e-98 Identity = 186/430 (43.26%), Postives = 236/430 (54.88%), Query Frame = 0 Query: 2 KGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQS-----------YTEDLRDSGVSGKDFGD---TTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 417 KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG ++A +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL SL W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ + + E G +PQ+ EDL G S + GD T+ +V + N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 53 KGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELEDNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGDKALSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDRLDLSSLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLKR-LNSTKRVKPIPLGDGEGSGEE---SPQTTASSDAAGEEGLNEDLSLGG-SHSEIGDQHNTSSQVNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYWGAHEFFTK 452 The following BLAST results are available for this feature:
BLAST of EWM26122.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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