EWM26129.1, cds4560 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|585108123|gb|EWM26129.1| (peptidyl-prolyl cis-trans fkbp-type [Nannochloropsis gaditana]) HSP 1 Score: 310.071 bits (793), Expect = 1.119e-106 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 Query: 1 MNLPRTFLQTSQPLVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLLADSSTGNIVVDDSKKQVRQFIRERTAVPSCKTTK 158 MNLPRTFLQTSQPLVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLLADSSTGNIVVDDSKKQVRQFIRERTAVPSCKTTK Sbjct: 1 MNLPRTFLQTSQPLVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLLADSSTGNIVVDDSKKQVRQFIRERTAVPSCKTTK 158
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|635362032|emb|CCI49145.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 105.145 bits (261), Expect = 2.240e-26 Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 0 Query: 15 VAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLLAD 126 VA S +A ++G RELIL+ S+DL C NLMCE++G C CRLA L+ P L L LSNN L +P+ VF LQ LRYL++++N L +P +V++L LE L + N L++ Sbjct: 5 VATSFRQAAKSGAATRELILNKSQDLVCKNLMCERIGGACACRLAHILTCVPKLTHLDLSNNELETIPDAVFSLQDLRYLNVADNKLSSVPHNVVKLKCLEHLDLSGNNLSE 116
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|325186415|emb|CCA20920.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 105.145 bits (261), Expect = 2.823e-26 Identity = 53/115 (46.09%), Postives = 73/115 (63.48%), Query Frame = 0 Query: 15 VAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLLADSST 129 VA S + + G +++LIL S+DL C NLMCEK+G C CRLA L+ P L L LSNN+L +PE VF LQ L+YL+L+ N L LP V++L LE L + N L++ ++ Sbjct: 5 VATSFRDVAKNGATIKKLILKKSQDLVCKNLMCEKIGGACACRLAHILTCVPKLTHLDLSNNSLETIPEAVFGLQDLKYLNLAENKLSSLPQDVMKLQELEYLDLSGNDLSEVAS 119
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|695409974|ref|XP_009525062.1| (hypothetical protein PHYSODRAFT_496570 [Phytophthora sojae] >gi|348682529|gb|EGZ22345.1| hypothetical protein PHYSODRAFT_496570 [Phytophthora sojae]) HSP 1 Score: 103.99 bits (258), Expect = 3.506e-25 Identity = 60/118 (50.85%), Postives = 71/118 (60.17%), Query Frame = 0 Query: 7 FLQTSQPLVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLL 124 F +S ++A SL + R+G R+ EL LS S DL C LMCE VG+ C CRLA L + P L RL LS N L LP+ VF LQ+L LDL N L LPP V QL+ LE L V N L Sbjct: 19 FSDSSTCVLATSLRDIARSGARVEELELSKSGDLICRQLMCEHVGDACACRLALALERVPRLRRLDLSANQLRALPDAVFSLQNLATLDLQQNRLTTLPPEVQQLAQLEALDVSHNQL 136
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|299116608|emb|CBN76235.1| (Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]) HSP 1 Score: 103.605 bits (257), Expect = 5.603e-25 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 0 Query: 14 LVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLL 124 ++A+SL +A R G L+L SEDL C NLMC K+GE C+CRLA LS+ L+ L ++ N+L VLPE VF+L +L +LD+S N L++LP V LSSL L + +N L Sbjct: 2 VIARSLKDAARLGSATTSLLLRRSEDLVCQNLMCAKIGEACVCRLAVHLSRLGKLKELDVAENDLGVLPEPVFELPALEHLDVSGNGLKDLPAGVAALSSLRTLRLSDNAL 112
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|669147748|ref|XP_008609436.1| (hypothetical protein SDRG_05498 [Saprolegnia diclina VS20] >gi|530739032|gb|EQC37274.1| hypothetical protein SDRG_05498 [Saprolegnia diclina VS20]) HSP 1 Score: 97.4413 bits (241), Expect = 8.300e-23 Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 0 Query: 14 LVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVL-QLSSLEVLSVDEN 122 ++AKSL +A +R+L+L SEDL C+NLMCE+VGE C+C+L+ L + P LE L +S NNL LP +F L+ L L++S N L LP +L L+SLE L V++N Sbjct: 1 MIAKSLRDAATHTSAVRQLVLRKSEDLLCMNLMCERVGEACVCKLSVVLERLPQLEHLDVSRNNLKSLPPAIFSLRHLTSLNVSGNKLSSLPDGLLSNLASLEALYVEDN 110
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|255083266|ref|XP_002504619.1| (predicted protein [Micromonas commoda] >gi|226519887|gb|ACO65877.1| predicted protein [Micromonas commoda]) HSP 1 Score: 96.2857 bits (238), Expect = 9.576e-23 Identity = 54/103 (52.43%), Postives = 70/103 (67.96%), Query Frame = 0 Query: 21 EATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTP-ALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDEN 122 EA R+ +R L L+ S DL CVN++CEKVGEPC+CRL+R L + L LVL+ N LT LP VF+LQ L+ LDLS N L E+P V++L SL++L V N Sbjct: 2 EANRS-PSMRALDLTGSSDLLCVNMVCEKVGEPCVCRLSRVLERNGRELRSLVLAGNKLTQLPASVFELQHLQVLDLSENELTEIPADVVKLESLKILDVRNN 103
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|301109419|ref|XP_002903790.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096793|gb|EEY54845.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 96.6709 bits (239), Expect = 3.472e-22 Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 19 LSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDEN 122 L + R+G R+ +L LS S DL C LMCE VG+ C CRLA TL + P L+RL LSNN L LP+ V+ LQSL LDL N L LP V +L+ LE L + N Sbjct: 31 LRDIARSGARVVKLQLSKSSDLVCRQLMCEHVGDACACRLALTLERVPRLQRLDLSNNQLRDLPDAVYALQSLETLDLQQNRLTSLPTDVHKLTQLETLDIRHN 134
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|1173946227|gb|OQR94779.1| (hypothetical protein ACHHYP_00922 [Achlya hypogyna]) HSP 1 Score: 93.9745 bits (232), Expect = 1.274e-21 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 0 Query: 14 LVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDEN 122 ++AKSL EA +R+L+L SEDL C NLMCE+VGE C+C+L+ L + P L L +S N L LP V L++L LD+S N L+ L PS+ QL++LE L V++N Sbjct: 1 MIAKSLREAATHTTAVRKLLLRKSEDLVCRNLMCERVGEACVCKLSLVLERLPELTHLDVSGNKLGALPPAVAALRNLTELDVSGNRLKSL-PSLAQLTALETLRVEDN 108
BLAST of EWM26129.1 vs. NCBI_GenBank
Match: gi|567957330|gb|ETK82933.1| (hypothetical protein L915_11777 [Phytophthora parasitica] >gi|567985980|gb|ETL36312.1| hypothetical protein L916_11702 [Phytophthora parasitica] >gi|570947415|gb|ETP12672.1| hypothetical protein F441_12030 [Phytophthora parasitica CJ01A1] >gi|970654846|gb|KUF93099.1| Glucanase inhibitor protein 1 [Phytophthora nicotianae]) HSP 1 Score: 94.7449 bits (234), Expect = 1.558e-21 Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 0 Query: 5 RTFLQTSQPLVAKSLSEATRAGKRLRELILSSSEDLRCVNLMCEKVGEPCICRLARTLSQTPALERLVLSNNNLTVLPEEVFKLQSLRYLDLSNNLLRELPPSVLQLSSLEVLSVDENLL 124 +F S L A L + RAG R+ +L L S DL C LMCE VG+ C CRLA L + P L+RL LSNN L LP+ V+ LQSL LD+ +N L L V +L+ L++L V N L Sbjct: 16 HSFSTASTALSATCLRDIARAGARVVDLQLPKSGDLVCRQLMCEHVGDACACRLALALERVPRLQRLDLSNNQLRALPDAVYALQSLATLDVQHNRLTLLSTDVQKLTQLKILDVRHNQL 135 The following BLAST results are available for this feature:
BLAST of EWM26129.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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