EWM26116.1, cds4559 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|585108110|gb|EWM26116.1| (uncharacterized protein Naga_100014g49 [Nannochloropsis gaditana]) HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MHTLKIMRGRVQPPLSLMQTFELSKIARSDITRGIGSTSTARLGKPSSQGAYKGSIDPKPDLPPDISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQASTGKTKRLQGKISTRA 289 MHTLKIMRGRVQPPLSLMQTFELSKIARSDITRGIGSTSTARLGKPSSQGAYKGSIDPKPDLPPDISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQASTGKTKRLQGKISTRA Sbjct: 1 MHTLKIMRGRVQPPLSLMQTFELSKIARSDITRGIGSTSTARLGKPSSQGAYKGSIDPKPDLPPDISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKLLKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQASTGKTKRLQGKISTRA 289
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|302772823|ref|XP_002969829.1| (hypothetical protein SELMODRAFT_410829 [Selaginella moellendorffii] >gi|300162340|gb|EFJ28953.1| hypothetical protein SELMODRAFT_410829 [Selaginella moellendorffii]) HSP 1 Score: 120.168 bits (300), Expect = 7.709e-29 Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 68 DKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL-----LKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 D++AA LK+ KI E+I +GYF++ + K+ L PP A FP ++ T + N+ V+LV +SFR+S ++ W+ P E F T + V+++S+ + L L + +N KA + +R + FG + D R+ + + NR+ GY+FLVD+ GR+RWR +G+ S EE ++ C L +E Sbjct: 52 DRKAANLKERAKIMEDIDQGYFFDFKDFKKHSGKVVATSTALDPPASATIFPK---STVYTPTRESSIFPLNRNSCVTLVCLSFRNSAEAMVDSWVSPLREAFPSTSDIQVIELSWVESGVLSFVPVRHLFLMCINSSKACTKADR--KLLYAFGDSYDFRKELRVTNRLTGYMFLVDRAGRIRWRSSGQASPEEASHLVSCTASLLQES 256
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|302806868|ref|XP_002985165.1| (hypothetical protein SELMODRAFT_424297 [Selaginella moellendorffii] >gi|300146993|gb|EFJ13659.1| hypothetical protein SELMODRAFT_424297 [Selaginella moellendorffii]) HSP 1 Score: 119.398 bits (298), Expect = 1.150e-28 Identity = 64/210 (30.48%), Postives = 108/210 (51.43%), Query Frame = 0 Query: 68 DKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL-----LKFLLVNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 D++AA LK+ KI E+I +GYF++ + K+ L PP A FP ++ T + N+ V+LV +SFR+S ++ W+ P E F T + V+++S+ + L L + +N K+ + +R + FG + D R+ + + NR+ GY+FLVD+ GR+RWR +G+ S EE ++ C L +E Sbjct: 52 DRKAANLKERAKIMEDIDQGYFFDFKDFKKHSGKVVATSTALDPPASATIFPK---STVYTPTRESSIFPLNKNSCVTLVCLSFRNSAEAMVDSWVSPLREAFPSTSDIQVIELSWVESGVLSFVPVRHLFLMCINSSKSCTKADR--KLLYAFGDSYDFRKDLRVTNRLTGYMFLVDRAGRIRWRSSGQASPEEASHLVSCTASLLQES 256
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|836712777|gb|AKM76484.1| (AT1G08220-like protein [Geranium incanum]) HSP 1 Score: 116.701 bits (291), Expect = 1.905e-27 Identity = 73/231 (31.60%), Postives = 123/231 (53.25%), Query Frame = 0 Query: 66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLR--------------QTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRS---WLKLLKFLL-------VNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 +++KEA K+ ++ +E+ RGYF ++ ++ + K+ +A+K +VP A KFPS + V++ G +L+ N + SL+ +SFR+S ++ W PFLE F+ + + + +VSF D + W + K LL +G+ +++R Q FG D R+ + I N + GY+FL+DK GR+RW G+G S EE+ S+L C L EE+ Sbjct: 53 MANKEAIE-KERARLADEMNRGYFADIDELKKHGGKIAQANKIIVPAMVATKFPSLE------VSYSDGRVLKLPIVSNGKAPNAEGMPNRKASLLCLSFRESSRAMVNSWSVPFLETFSASKDVDLYEVSFIDSTLLCWKPIKKLLLRKLRSSNPDGKNDALQR----QIVYSFGDHYDFRKELRILNLLTGYIFLLDKFGRIRWHGSGLASKEELASLLSCTSLLVEEK 272
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|1063490694|ref|XP_007016014.2| (PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X1 [Theobroma cacao]) HSP 1 Score: 116.701 bits (291), Expect = 2.082e-27 Identity = 76/228 (33.33%), Postives = 123/228 (53.95%), Query Frame = 0 Query: 66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQA 273 + +KEA K+ ++ +E+ RGYF ++ ++ + K+ A+K ++P A+KFP L VT+ G L+ +N +VSLV +SFR S +++ W PF E F+ + + + +VSF D SWL +K LL+ + SI+ E++ Q FG R+ + I N + GY+FL+DKLGR+RW+G G + EE+ S+L C L EE+ Sbjct: 50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPAMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKNALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEKC 269
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|1063490696|ref|XP_007016013.2| (PREDICTED: mitochondrial ATPase complex subunit ATP10 isoform X2 [Theobroma cacao]) HSP 1 Score: 116.316 bits (290), Expect = 2.243e-27 Identity = 76/227 (33.48%), Postives = 123/227 (54.19%), Query Frame = 0 Query: 66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 + +KEA K+ ++ +E+ RGYF ++ ++ + K+ A+K ++P A+KFP L VT+ G L+ +N +VSLV +SFR S +++ W PF E F+ + + + +VSF D SWL +K LL+ + SI+ E++ Q FG R+ + I N + GY+FL+DKLGR+RW+G G + EE+ S+L C L EE+ Sbjct: 50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPAMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKNALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEK 268
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|508786377|gb|EOY33633.1| (Mitochondria isoform 2 [Theobroma cacao]) HSP 1 Score: 115.546 bits (288), Expect = 5.739e-27 Identity = 76/228 (33.33%), Postives = 122/228 (53.51%), Query Frame = 0 Query: 66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQA 273 + +KEA K+ ++ +E+ RGYF ++ ++ + K+ A+K ++P A+KFP L VT+ G L+ +N +VSLV +SFR S +++ W PF E F+ + + + +VSF D SWL +K LL+ + SI+ E+ Q FG R+ + I N + GY+FL+DKLGR+RW+G G + EE+ S+L C L EE+ Sbjct: 50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPTMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKDALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEKC 269
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|508786376|gb|EOY33632.1| (Mitochondria isoform 1 [Theobroma cacao] >gi|508786378|gb|EOY33634.1| Mitochondria isoform 1 [Theobroma cacao]) HSP 1 Score: 115.161 bits (287), Expect = 5.941e-27 Identity = 76/227 (33.48%), Postives = 122/227 (53.74%), Query Frame = 0 Query: 66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 + +KEA K+ ++ +E+ RGYF ++ ++ + K+ A+K ++P A+KFP L VT+ G L+ +N +VSLV +SFR S +++ W PF E F+ + + + +VSF D SWL +K LL+ + SI+ E+ Q FG R+ + I N + GY+FL+DKLGR+RW+G G + EE+ S+L C L EE+ Sbjct: 50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAVANKIIIPTMAAVKFPG------LEVTYSDGRTLKLPIVSNGDRVDAEKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFSNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKDALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEK 268
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|836712773|gb|AKM76482.1| (AT1G08220-like protein [Erodium trifolium]) HSP 1 Score: 115.546 bits (288), Expect = 5.965e-27 Identity = 71/222 (31.98%), Postives = 116/222 (52.25%), Query Frame = 0 Query: 69 KEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLR--------QTNNQVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRS---WLKLLKFLL-------VNGQKASIERERHGQSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 E LK+ +I +EI+RGYF ++ +I + K+ A+K +VP +A KFPS + + G T +F + N + S++ ++FR+ +++ W P L+ F+ + + + QVSF D + W + K LL +G ++ R Q FG R+ +GI N GY+FL+D+ GR+RWRGTG S EE+ S++ C L EE+ Sbjct: 56 NEDEVLKERARITDEIKRGYFLDISEIKQHGGKIALANKVIVPVLEAAKFPSLEVDYPDGRTLKFPIVSNGKVANADALPNPKASILCLTFREFSQKMINSWSVPLLDTFSDSKDVELYQVSFIDSTLLCWKPMKKLLLRTMRSSKPDGSNDALRR----QMVYHFGDHYYFRKKLGIVNLCTGYIFLLDRFGRIRWRGTGMASKEELTSLVSCTSLLLEEK 273
BLAST of EWM26116.1 vs. NCBI_GenBank
Match: gi|1204893092|ref|XP_021278330.1| (mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica] >gi|1204893094|ref|XP_021278331.1| mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica] >gi|1204893096|ref|XP_021278332.1| mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica] >gi|1204893098|ref|XP_021278333.1| mitochondrial ATPase complex subunit ATP10 isoform X1 [Herrania umbratica]) HSP 1 Score: 115.161 bits (287), Expect = 6.951e-27 Identity = 75/227 (33.04%), Postives = 121/227 (53.30%), Query Frame = 0 Query: 66 ISDKEAARLKKVEKIKEEIRRGYFYELGQINRTKSKLFEADKELVPPQKALKFPSFQAESLLGVTHQFGALLRQ--TNN------------QVSLVGVSFRDSGFRVLPDWIKPFLEEFAQTPAMTVLQVSFEDRSWLKL---LKFLLVNGQKASIERERHG---QSFLRFGSTQDIREGMGIDNRMVGYVFLVDKLGRMRWRGTGRPSDEEIGSMLKCAHELFEEQ 272 + +KEA K+ ++ +E+ RGYF ++ ++ + K+ A+K ++P A+KFP + VT+ G L+ +N +VSLV +SFR S +++ W PF E F + + + +VSF D SWL +K LL+ + SI+ E+ Q FG R+ + I N + GY+FL+DKLGR+RW+G G + EE+ S+L C L EE+ Sbjct: 50 LGNKEAIE-KERARLADEMNRGYFADISELKQHGGKIAMANKIIIPAMAAVKFPGLE------VTYSDGRTLKLPIVSNGDRVDAKKLAVPKVSLVCLSFRASSQKMIDTWCTPFSEAFGNSKDVQLYEVSFID-SWLLCRNPIKRLLLRTMRKSIDGEKDALQRQIVYSFGDHYYFRKELKILNLLTGYIFLLDKLGRVRWQGFGLATQEELSSLLSCTTHLLEEK 268 The following BLAST results are available for this feature:
BLAST of EWM26116.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|