EWM26171.1, cds4505 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|585108167|gb|EWM26171.1| (initiation factor 3g [Nannochloropsis gaditana]) HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
Query: 1 MRRVAEPPIVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 312
MRRVAEPPIVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER
Sbjct: 1 MRRVAEPPIVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 312
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|553180294|ref|XP_005853381.1| (translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526] >gi|422295679|gb|EKU22978.1| translation initiation factor 3 subunit G [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 632.098 bits (1629), Expect = 0.000e+0 Identity = 307/309 (99.35%), Postives = 307/309 (99.35%), Query Frame = 0
Query: 4 VAEPPIVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 312
VAEPPIVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRK RYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQ GPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER
Sbjct: 439 VAEPPIVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQRKARYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAHVRAEEQSIAIEDPHSLAEDEPAADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQMGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLTHGTER 747
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|325183684|emb|CCA18143.1| (eukaryotic translation initiation factor 3 subunit G putative [Albugo laibachii Nc14]) HSP 1 Score: 159.458 bits (402), Expect = 4.594e-43 Identity = 117/322 (36.34%), Postives = 167/322 (51.86%), Query Frame = 0
Query: 9 IVVVMSREVQDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQ-RKVRYVQKF-KVEEITTHVPKRTFVRKTWARFGDAR---DAHVR-AEEQSIAIEDPHS--------LAEDEPAADLKNLGLIQQKLAARKAGLLPST-TPGESFAEYDGGSGIGGMNGGEEGAPRR-----------TMGERFGGG----------GPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQ 294
+V+ SR WGD EDD+ LP E D+NGV T EW + + +KV+ +K +VEEI + KR RK W +FG A D++V +++ +EDP + E+ A +K +I R G++ T + + G G+ G + A ++ FGGG G G E+ + T+RVTN+S DT +DDL LF FG + RV+LA+D+E SRGFAFVSF + +DA++A++ LQGYGYDHLIL+LEWA P + REE G++ F SGYG+ L Q
Sbjct: 1 MVISESR----WGD-EDDDFLPARTESDVDKNGVRTIVEWKFNELGQKVKITKKVQRVEEIH-RISKRVLERKNWKKFGAALQGDDSNVTYPSNETVLMEDPSADQILPGEKREEESVFAGVKGASII----TCRHCGVVGDHWTLKCPYKDTPAGEIPTGIKSGADEATNNDADATEENTGSSLSRAFGGGPDKYVPPNLRNRGDDKGESYAEDTENATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETMQSRGFAFVSFARADDAERALNKLQGYGYDHLILKLEWARPSNKPREEDRGMSTTFRSGYGKALPQ 312
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|673050991|ref|XP_008879456.1| (hypothetical protein H310_13649 [Aphanomyces invadans] >gi|574464775|gb|ETV91819.1| hypothetical protein H310_13649 [Aphanomyces invadans]) HSP 1 Score: 159.458 bits (402), Expect = 7.357e-43 Identity = 110/325 (33.85%), Postives = 161/325 (49.54%), Query Frame = 0
Query: 18 QDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQR-KVRYVQKFKVEEITTHVPKRTFVRKTWARFGD-ARDAHVRA---EEQSIAIEDPHS--------LAEDEPAADLKNLGLIQQKLAARKAGLL----------------------PSTTPGESFAEYDG------------GSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQD 295
Q WGD ED++ LPQ E +PD NGV T W + D + KV+ K + + + KR RK+WA+FG+ A + + +++ ++DP++ E+ + +K+ ++ R G++ +T P E S G + G+ P +R GG G R++D T+RVTN+S +T +DDLK+LF FG L RV+LAKD+E SRGFAFVSF + DA+KA++ LQGYGYDHLIL+LEWA P T+ + + F SGYG+ L QD
Sbjct: 7 QRWGD-EDEDFLPQRTESEPDANGVRTIVSWKFDDDKNKVKVTTKIQKVQTVHKISKRVIERKSWAKFGEGAEEGNTNVTYLSNETVGMDDPNADQILPGEKKEEESVFSGVKSSSIV----VCRHCGMVGDHWTLKCPYKDSAPPTADELAENTPPAEDTKAAPSSSFASAASGSRLASAFSGASSGKYVPP----SQRRDGGAGGDDARQSSRDDDS-ATLRVTNISPETREDDLKDLFRAFGPLERVYLAKDRETFQSRGFAFVSFAYRSDAEKALNKLQGYGYDHLILKLEWAKPSTKTAVDEGSVGTTFRSGYGKALPQD 321
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|635369220|emb|CCI42569.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 164.081 bits (414), Expect = 1.658e-41 Identity = 114/302 (37.75%), Postives = 155/302 (51.32%), Query Frame = 0
Query: 20 WGDYEDDEELPQPVEGKPDENGVVTRTEWAWKD-QRKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDA---RDAHVR-AEEQSIAIEDPHS--------LAEDEPAADLKNLGLIQQKLAARKAGLL----------PSTTPGE------SFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPG--GREEDK---------FPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREE-RDGL 280
WGD EDD+ LP E +PD+NGV T EW + D +KV+ +K + E + KR RK W +FG A D++V +++ +EDP++ E+ A +K +I R G++ T PGE S A+ D + E + R G GGP P R +DK T+RVTN+S DT +DDL LF FG + RV+LA+D+E SRGFAFVSF + EDA++A+D LQGYGYDHLIL+LEWA P + REE RD +
Sbjct: 8 WGD-EDDDFLPTRTESEPDKNGVRTIVEWKFNDLGQKVKITKKVQRVEEIHRISKRVLERKNWKKFGAALQGNDSNVTYPSNETVYMEDPNADQILPGEKREEESVFAGVKGASII----TCRHCGIVGDHWTLKCPYKDTPPGEIPTGINSGADEDTKADADTTESTTESSLSRAFG-----GGPDKYVPPNLRNRGDDKGESYANDTDNATLRVTNISPDTCEDDLYELFRVFGHVLRVYLARDRETLQSRGFAFVSFARVEDAERALDKLQGYGYDHLILKLEWARPSNKPREEDRDAI 299
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|301120270|ref|XP_002907862.1| (eukaryotic translation initiation factor 3 subunit G, putative [Phytophthora infestans T30-4] >gi|262102893|gb|EEY60945.1| eukaryotic translation initiation factor 3 subunit G, putative [Phytophthora infestans T30-4]) HSP 1 Score: 154.451 bits (389), Expect = 5.040e-41 Identity = 119/321 (37.07%), Postives = 155/321 (48.29%), Query Frame = 0
Query: 20 WGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQ-RKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARD-------AHVRAEEQSIAIEDPHS--------LAEDEPAADLKNLGLI--------------------------QQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAG-GFVSGYGQRLAQDTT 297
WGD EDD LPQ VE +PD GV EW + KV+ +K K + KR RK WA+FGDA D ++ EE + +EDP++ E+ A +KN ++ +Q +A R + S GS + G G + P G GG G G D T+RVTNVS DT +DDLK LF FG + RV+LAKD+E SRGFAFVSF+ +EDA+KA++ LQGYGYDHLIL+LEWA P + + G G F SGYG+ L Q+
Sbjct: 8 WGDEEDDL-LPQRVESEPDSKGVRQIVEWKVNEAGDKVKVTKKVKKVTEVERISKRALERKKWAKFGDALDDGDGSNVTYMPHEE--VTLEDPNADQVLPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAESGEAAAPAAASAEPAARGSALDGAFGSSKYVPPSLRGRASAGGDAG-----GDNSRDDSATLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKALNKLQGYGYDHLILKLEWAKPSNKPANDDAGSMGTTFRSGYGKALPQNVA 320
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|698817294|ref|XP_009841676.1| (hypothetical protein H257_15316 [Aphanomyces astaci] >gi|574103179|gb|ETV68722.1| hypothetical protein H257_15316 [Aphanomyces astaci]) HSP 1 Score: 153.295 bits (386), Expect = 1.237e-40 Identity = 106/323 (32.82%), Postives = 156/323 (48.30%), Query Frame = 0
Query: 18 QDWGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQR-KVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARDAH-----VRAEEQSIAIEDPHS--LAEDEPAADLKNLGLIQQK--LAARKAGLL----------------------PSTTPGESFAEYDG-------------GSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQD 295
Q WGD ED++ LPQ E +PD NGV T W + D + KV+ K + + + KR RK+W +FG+ + + +++ ++DP++ + E + ++Q + R G++ +T P E + GG +G +R GG G G +D T+RVTN+S +T +DDLK+LF FG L RV+LAKD+E SRGFAFVSF + DA+KA++ LQG+GYDHLIL+LEWA P T+ + + F SGYG+ L QD
Sbjct: 6 QRWGD-EDEDFLPQRTETEPDANGVRTIVSWKFDDDKNKVKVTTKIQKVQTVHKISKRVTERKSWGKFGEGLNVEGNTNVTYSSNETVFMDDPNADQILPGEKKEEESVFSGVKQTSIVVCRHCGMVGDHWTLKCPYKDSAPPTADELAENTPPTEDARAAPSSSFASAASGGSRLANAFGGTSGKYVPPSQR------GGAGAGASDDARQSRDDDSATLRVTNISPETREDDLKDLFRTFGPLERVYLAKDRETFQSRGFAFVSFAYRGDAEKALNKLQGFGYDHLILKLEWAKPSTKTAVDEGAVGTTFRSGYGKALPQD 321
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|1214704771|gb|OWZ16574.1| (Eukaryotic translation initiation factor 3 subunit G [Phytophthora megakarya]) HSP 1 Score: 153.295 bits (386), Expect = 1.831e-40 Identity = 123/321 (38.32%), Postives = 155/321 (48.29%), Query Frame = 0
Query: 20 WGDYEDDEELPQPVEGKPDENGVVTRTEWAWKDQ-RKVRYVQKFKVEEITTHVPKRTFVRKTWARFGDARD-------AHVRAEEQSIAIEDPHS--------LAEDEPAADLKNLGLI--------------------------QQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAG-GFVSGYGQRLAQDTT 297
WGD EDD LPQ VE +PD NGV EW D KV+ +K K V KR RK WA+FGDA D ++ EE + +EDP++ E+ A +KN ++ +Q +A R + GS + G G + P G GG G R D T+RVTNVS DT +DDLK LF FG + RV+LAKD+E SRGFAFVSF+ +EDA+KAM LQGYGYDHLIL+LEWA P + +E G G F SGYG+ L Q+
Sbjct: 8 WGDEEDDL-LPQRVESEPDSNGVRQIVEWKLNDAGDKVKVTKKVKKVTEVERVSKRALERKKWAKFGDALDDGDGSNVTYMSYEE--VTLEDPNADQILPGEKKEEENIFAGVKNSSIVVCRHCGMVGDHWTLKCPYKDTPKEELEQDMAKRAEAGESAAPAAAPAEPAARGSALDGAFGSSKYVPPSLRGRAGAGGDAGGDNSRDSR--DDSCTLRVTNVSPDTREDDLKELFRAFGPVARVYLAKDRETFQSRGFAFVSFMYREDAEKAMAKLQGYGYDHLILKLEWAKPSNKPAQEDAGSMGTTFRSGYGKALPQNVA 323
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|1210524896|dbj|GAX16331.1| (translation initiation factor 3 subunit G [Fistulifera solaris]) HSP 1 Score: 152.525 bits (384), Expect = 2.156e-40 Identity = 104/265 (39.25%), Postives = 140/265 (52.83%), Query Frame = 0
Query: 56 VRYVQKFKVEEITTHVPKRTFVRKTWARFGDA---RDAHVRAEEQS---IAIEDPHS---LAEDEP----AADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLT 307
++ V K KV K R+ W++FG A + + QS I +EDPH+ L +++P A +L QQ+ + + + G+G + G+ P R G G P R +D TIRVTN+SE+T++ DL+ LF R+G + RV+LAKDKE SRGFAFVSF+ + DA KAM++LQGYGYDHLIL+LEWA P + G F SGYG+ LAQDTT S ASNLT
Sbjct: 60 LKTVTKVKVSVERVREAKAVEERRQWSKFGQALIDEKENTKTTVQSKDEILMEDPHADTDLQDEDPGKAIAGNLNEFWAKQQRRQLERKYDVTGNAEPQDAGWTQVGTGAAAPSTGKYVPP----AARGGASGASSAFKPERRMDD-LNTIRVTNLSENTSEHDLQELFARYGRISRVYLAKDKETMQSRGFAFVSFVMQSDAAKAMEALQGYGYDHLILKLEWARPNAPKDPATSGTE--FRSGYGKALAQDTTAKVSYASNLT 317
BLAST of EWM26171.1 vs. NCBI_GenBank
Match: gi|1210512798|dbj|GAX28181.1| (translation initiation factor 3 subunit G [Fistulifera solaris]) HSP 1 Score: 152.525 bits (384), Expect = 2.297e-40 Identity = 103/265 (38.87%), Postives = 139/265 (52.45%), Query Frame = 0
Query: 56 VRYVQKFKVEEITTHVPKRTFVRKTWARFGDA---RDAHVRAEEQS---IAIEDPHS---LAEDEP----AADLKNLGLIQQKLAARKAGLLPSTTPGESFAEYDGGSGIGGMNGGEEGAPRRTMGERFGGGGPGPQTGPGGREEDKFPTIRVTNVSEDTTDDDLKNLFGRFGVLHRVFLAKDKERNTSRGFAFVSFLKKEDAQKAMDSLQGYGYDHLILRLEWANPPTQRREERDGLAGGFVSGYGQRLAQDTTMAYSTASNLT 307
++ V K KV K R+ W++FG A + + QS I +EDPH+ L +++P A +L QQ+ + + + G+G + G+ P G G P+ R D TIRVTN+SE+T++ DL+ LF R+G + RV+LAKDKE SRGFAFVSF+ + DA KAM++LQGYGYDHLIL+LEWA P + G F SGYG+ LAQDTT S ASNLT
Sbjct: 60 LKTVTKVKVSVERVREAKAVEERRQWSKFGQALIDEKENTKTTVQSKDEILMEDPHADTDLQDEDPGKAIAGNLNEFWAKQQRRQLERKYDVTGNAEPQDAGWTQVGTGAAAPSTGKYVPPAARGGASGGSSAFKPE-----RRMDDLNTIRVTNLSENTSEHDLQELFARYGRISRVYLAKDKETMQSRGFAFVSFVMQSDAAKAMEALQGYGYDHLILKLEWARPNAPKDPATSGTE--FRSGYGKALAQDTTAKVSYASNLT 317 The following BLAST results are available for this feature:
BLAST of EWM26171.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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