EWM26185.1, cds4480 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|585108182|gb|EWM26185.1| (thioredoxin domain-containing protein 9 [Nannochloropsis gaditana]) HSP 1 Score: 647.892 bits (1670), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 Query: 1 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKNDERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAIDYTAPPTLDELRRFHLSQHAAIRGGTATTCDDDEDLDGCLSD 315 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKNDERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAIDYTAPPTLDELRRFHLSQHAAIRGGTATTCDDDEDLDGCLSD Sbjct: 1 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKNDERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAIDYTAPPTLDELRRFHLSQHAAIRGGTATTCDDDEDLDGCLSD 315
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|298712639|emb|CBJ48664.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 215.312 bits (547), Expect = 1.201e-64 Identity = 135/295 (45.76%), Postives = 172/295 (58.31%), Query Frame = 0 Query: 7 MVDPAQGDDVYQHM----AQTVNDRMGKAVEELRQKNDERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQE--EIVQKLQESHLLSDEEDDE-------------------AEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAIDYT 276 MVDP D+ + M A VNDRMG+AV EL+ K E+ AS D PTG+AY A+ R Q+ + + IR + A A R+E E+ +++ S L+ E D E A DPE IRE RL ELK H+ + +N++KGHGQYREI QDEFLPEVT S +V+VHFYHKDF RCK+MD L LAP H+ETKFL+I+AEKAPFFV KL VKILPTVI F D +A + GF+GL G P + DE+P + +A L +AI Y+ Sbjct: 1 MVDPLGADEEEKSMQEMVANEVNDRMGRAVGELKDKY-EKGGKGYDAAS----DAQ---PTGAAY----AQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASARLNGEVDSEDEDGGDGGSDDVDSDDELLAGLDADPEICRIRESRLRELKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYS 283
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|553186943|ref|XP_005854521.1| (thioredoxin-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294538|gb|EKU21838.1| thioredoxin-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 191.045 bits (484), Expect = 4.085e-58 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 Query: 177 HFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAAR 266 HFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAAR Sbjct: 1 HFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQPKGEEDEFPTARVAAR 90
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|698803526|ref|XP_009834792.1| (hypothetical protein H257_10054 [Aphanomyces astaci] >gi|574110161|gb|ETV75661.1| hypothetical protein H257_10054 [Aphanomyces astaci]) HSP 1 Score: 194.897 bits (494), Expect = 6.997e-57 Identity = 91/153 (59.48%), Postives = 116/153 (75.82%), Query Frame = 0 Query: 125 PEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEE-RLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAIDYT 276 P+F +RE RL +L+ Q++ K +N++KGHG YREI QDEFL EVT S RVLVHFYH+DF RCK+MD HL +A HVE K LKI+AEKAPFFV KL V++LPT+I F++ IA + R+ GFEGLAD P G EDEFPT +A RL K+ A++ + Sbjct: 108 PDFMRLREVRLKQLQEQYKLKAENLAKGHGDYREILQDEFLKEVTSSARVLVHFYHRDFERCKVMDMHLGRIAKRHVEVKVLKIDAEKAPFFVAKLVVRVLPTIILFENGIANDTRVVGFEGLADDLPLGREDEFPTVNLARRLAKMGALNSS 260
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|673021762|ref|XP_008864842.1| (hypothetical protein H310_02925 [Aphanomyces invadans] >gi|574479773|gb|ETW06767.1| hypothetical protein H310_02925 [Aphanomyces invadans]) HSP 1 Score: 189.504 bits (480), Expect = 6.121e-55 Identity = 89/149 (59.73%), Postives = 113/149 (75.84%), Query Frame = 0 Query: 127 FKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIA-EERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAID 274 F +RE RL +L+ Q++ K +N++KGHG YREI QDEFL EVT S RVLVHFYH+DF RCKI+D HL A HVE K LKI+AEKAPFF+ KL V++LPT+IFF++ IA ++R+ GFEGL D P G EDEFPT +A RL K+ A++ Sbjct: 107 FIRLREIRLKQLQEQYKLKAENLAKGHGDYREIVQDEFLKEVTSSARVLVHFYHRDFERCKIIDMHLGRFAKRHVEVKVLKIDAEKAPFFISKLVVRVLPTIIFFENGIANDDRIVGFEGLTDDVPLGHEDEFPTVNLARRLAKIGALN 255
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|1173949340|gb|OQR97390.1| (thioredoxin [Thraustotheca clavata]) HSP 1 Score: 189.119 bits (479), Expect = 6.762e-55 Identity = 124/309 (40.13%), Postives = 182/309 (58.90%), Query Frame = 0 Query: 1 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKNDERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIA-EERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAIDYTAPPTLDELRRFHL-SQHAAIRGGTATTCDDDE 307 MASKF+MV + H+ DRMG A+E+L+ + + Q A + ++ +Q+ A AQ+ K + V E ++LQ+ + D++ ++ + +L RE RL +L+ Q++ K +N++KGHG YREITQDEFL EVT S RV+VHFYH+DF RCK++D HL+ +A H+E KFLK++AEKAPFFV KL V++LPT+I+FK+ IA ++R+ GFE L G G+EDEFPT +A RL K+ AID DEL + ++ ++I+ G T D DE Sbjct: 1 MASKFSMVGGSGLFGAEDHL--EAQDRMGAAMEQLKIREEHEKQQRQV-AQIEEQ------------KQLLATLDAQE-------TKFINETVKPEHYEN--EQLQKKNEEDDDDFEDDFEEDAEFLRL-RELRLKQLQEQYRVKQENLAKGHGDYREITQDEFLKEVTSSVRVVVHFYHRDFERCKVIDMHLSKIAKRHIECKFLKLDAEKAPFFVNKLVVRVLPTIIYFKEGIASDDRIIGFEELTQGVGVGKEDEFPTVNLARRLAKIGAIDGAG----DELESLNYEAKKSSIQVGYHTEYDSDE 280
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|698803528|ref|XP_009834793.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574110162|gb|ETV75662.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 185.267 bits (469), Expect = 8.620e-54 Identity = 87/140 (62.14%), Postives = 107/140 (76.43%), Query Frame = 0 Query: 125 PEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEE-RLQGFEGLADGQPKGEEDEFPTARV 263 P+F +RE RL +L+ Q++ K +N++KGHG YREI QDEFL EVT S RVLVHFYH+DF RCK+MD HL +A HVE K LKI+AEKAPFFV KL V++LPT+I F++ IA + R+ GFEGLAD P G EDEFPT V Sbjct: 108 PDFMRLREVRLKQLQEQYKLKAENLAKGHGDYREILQDEFLKEVTSSARVLVHFYHRDFERCKVMDMHLGRIAKRHVEVKVLKIDAEKAPFFVAKLVVRVLPTIILFENGIANDTRVVGFEGLADDLPLGREDEFPTVNV 247
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|669147880|ref|XP_008609502.1| (hypothetical protein SDRG_05557 [Saprolegnia diclina VS20] >gi|530739098|gb|EQC37340.1| hypothetical protein SDRG_05557 [Saprolegnia diclina VS20]) HSP 1 Score: 186.037 bits (471), Expect = 1.202e-53 Identity = 114/280 (40.71%), Postives = 159/280 (56.79%), Query Frame = 0 Query: 1 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKNDERTAASQSGASMPDED--TSVDGPTGSAYRQV---EARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIA-EERLQGFEGLADGQPKGEEDEFPTARVAARLGKLEAID 274 MASKF+MV + H+ DRMG A+E+L+ + + Q + +++D R+ E + QH + + + D + +L+E +R ++L E Q++ K +N++KGHG YREI QDEFL EVT S RV+VHFYH+DF RCK++D H+A +A H+E KFLK+NAEKAPFFV KL V++LPTVI+FKD IA ++R+ GFEGLADG G+EDEFPT +A RL K+ AID Sbjct: 1 MASKFSMVGGSGLFGAEDHL--EAQDRMGAAMEQLKVREEHEKQQRQVAKVAEQQQLLSNLDAQETQFIRETVKPEHYENDSQHAQKTSAEEDDDDFEDDFEDDPDFLRLRE----------------------LRMKQLQE---QYRVKQENLAKGHGDYREIVQDEFLKEVTSSPRVVVHFYHRDFERCKVIDMHMAKIAKRHIECKFLKLNAEKAPFFVTKLVVRVLPTVIYFKDGIASDDRVVGFEGLADGLRAGKEDEFPTVNLARRLAKIGAID 253
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|675196189|ref|XP_008906979.1| (hypothetical protein PPTG_13030 [Phytophthora parasitica INRA-310] >gi|566021369|gb|ETI44280.1| hypothetical protein F443_11019 [Phytophthora parasitica P1569] >gi|567958704|gb|ETK84290.1| hypothetical protein L915_10735 [Phytophthora parasitica] >gi|567987422|gb|ETL37726.1| hypothetical protein L916_10630 [Phytophthora parasitica] >gi|568016697|gb|ETL90874.1| hypothetical protein L917_10530 [Phytophthora parasitica] >gi|568047074|gb|ETM44171.1| hypothetical protein L914_10571 [Phytophthora parasitica] >gi|568092893|gb|ETN07694.1| hypothetical protein PPTG_13030 [Phytophthora parasitica INRA-310] >gi|570324984|gb|ETO72932.1| hypothetical protein F444_11085 [Phytophthora parasitica P1976] >gi|570948835|gb|ETP14092.1| hypothetical protein F441_10939 [Phytophthora parasitica CJ01A1] >gi|570981832|gb|ETP42159.1| hypothetical protein F442_10911 [Phytophthora parasitica P10297]) HSP 1 Score: 182.956 bits (463), Expect = 1.442e-52 Identity = 124/290 (42.76%), Postives = 167/290 (57.59%), Query Frame = 0 Query: 1 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKND--ERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIA-EERLQGFEGLADGQPKGE--------------EDEFPTARVAARLGKLEAI 273 MA+KF+M + + D H+ +DRM A+EEL+ KN+ E+ A Q +E R+VE +A K+ +Q D + I K E L SD+E AE DPE + IR RL +LK + +EK M+KGHG+YREITQDEFL EVTGS V VHFYH+DF RCKIMD H++ LA +H+E KFLK+NAEKAPFFV KL +++LPTV+ FKD +A ER+ GF+GL + + E D FPTA +A ++ ++ AI Sbjct: 1 MAAKFSMANTSGLFDSAAHV--EASDRMQGAMEELKVKNERQEKIRAQQQEQQEKEEKQRA--------RRVE----------EALAAKALQQKEDGSY---IKGKQTEEELDSDDEAMLAELDEDPELERIRAARLKQLKHEFEEKQSLMAKGHGEYREITQDEFLKEVTGSPLVAVHFYHRDFERCKIMDMHMSKLARSHIECKFLKLNAEKAPFFVEKLVIRVLPTVVCFKDGVAFPERVIGFDGLTEDDEEAELANFGSRANHHATSSDNFPTAALARKMVEIGAI 267
BLAST of EWM26185.1 vs. NCBI_GenBank
Match: gi|953486659|emb|CEG48721.1| (thioredoxin-like protein [Plasmopara halstedii]) HSP 1 Score: 181.8 bits (460), Expect = 3.663e-52 Identity = 114/290 (39.31%), Postives = 164/290 (56.55%), Query Frame = 0 Query: 1 MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKND--ERTAASQSGASMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEEIVQKLQESHLLSDEEDDEAEDSLD--PEFKLIRERRLAELKAQHQEKVDNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHVETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIA-EERLQGFEGLADGQPKGE------------EDEFPTARVAARLGKLEAI 273 MA+KFTMV+ + D H+ +DRM A+EEL+ KN+ E A Q +E + G + + +K R+ R ++ KE +SD +D+E + LD PE + IR RL +LK +++E+ ++KGHG++REI+QDEFL EVT S V VHFYH+DF RCKIMD HLA LA +H+E KFLK++AEKAPFF KL +++LP+++ F+D +A ER+ GFEGL K E D FPTA +A ++ ++ I Sbjct: 1 MAAKFTMVNTSGLFDPAAHV--EASDRMQNAMEELKLKNEQQETIRAQQKDKQEKEEKQRIKGIEEALAAKAAEQK---TDRSYVRDKQLKE--------------------ISDSDDEEMLNQLDDDPELERIRTARLKQLKNEYEEQQILLAKGHGEFREISQDEFLKEVTSSPLVAVHFYHRDFERCKIMDMHLAKLARSHIECKFLKLDAEKAPFFAKKLMIRVLPSIVCFRDGVAFSERIIGFEGLTSDDEKAEASNFGSRKTAHANDNFPTAALARKMVEIGVI 265 The following BLAST results are available for this feature:
BLAST of EWM26185.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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