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Properties
| Property Name | Value |
|---|
| Product | thioredoxin domain-containing protein 9 |
| Orig transcript id | gnl|cribi|Naga_100072g22.8018.mrna |
| Orig protein id | gnl|cribi|Naga_100072g22.8018 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:723927..725144 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4491 ID=rna4491|Name=rna4491|organism=Nannochloropsis gaditana|type=mRNA|length=2295bp
TTTTTTGTGAATCAGGGTCAGTCGGCTGTGTGTCTCAAGGGAGCTTTTTG
TGGAGTTAACGCAAAGCGAGCCAGGAGTACGTACGCGCATTGCTGCCTTC
GAACAAGATGCAGACCCTCTTTTTGGCCACTCTGGTAATATGCGCGAGTG
TAAGTACTGCTTTCGTGATGCCTCTTCGACCATGTACTCAGGCGGCTCGC
GCTGGGAGCCAAAGCAGAATTAGCAGCATCCGCGGGATTCGCTCCAGGCC
CCTCCGCATGGTGACCCATCCGGACGTCGACAACGAATACAAGCGCAAGC
TGTCGGAGCAACGAAGATGGACGAAGAGCACGAAGCAGTTGGCCACGTTG
GGACCCGTCTCGAACACCGAAGAGATGATTGAGAAATTGTTTCTGGCGGG
CGTGGACGTCTTCCGCCTCAATTTCTCGCACGGCGCGCATGAGGAGAAAA
AGGCATTATTTGATATCATCCGTGGATTGGAGGTCAAGTACAACCACCCT
ATTGCTATTTTAGCTGATTTGCAGGGTCCCAAGCTTCGAGTGGGGACTTT
CGATCACGACAAGGTCATTTTGGTGGATGGCCAAGCCTTCCGGTTCGACT
TGAGTGACGAGCCTGGTGACGCCGCGCGCGTGAACCTACCGCACCCAGAG
ATCATCAACACGCTTCAAGTGGGAGACACGCTCCTTCTGGACGATGGCAA
GCTTCGCATGACCGTCAGCGGCAAAGGCGAGGGCTATGTGGATACCTTGG
TGAATGTGGGGGGGGCGCTTTCGAACCGCAAGGGAGTGAACACGCCCTCC
GTGGTCCTCCCGATCTCCCCACTGACGCCCAAGGACCGAAAGGATTTGGA
ATTCGCCCTGTCTATCGGCGTCGATTGGGTGGCTTTGTCATTCGTGCAGC
AAGCCCAAGATATAGCGGAGCTCCGTACGCTGGTGGGAAACAAGGCCAAA
ATTATGGCCAAACTCGAGAAGCCCTCGGCGGTCGAGGAAGGCGTGGTGGA
TGACATCATTATGCTTTCAGACGGAATTATGGTGGCTCGCGGGGATCTGG
GCGTGGAAATGCGCCCGGAAGACGTGCCTGTGATCCAGAAACAAATTATT
GACAAGTGTCGCAAGTACGGGCGCCCCGTGGTGGTGGCGACGCAGATGCT
CGAGTCCATGATTGAGAGCCCGACCCCTACGCGAGCAGAGGCCTCGGACG
TGGCCACGGCCATCTATGACGGTGCGGATGCGATCATGTTGAGCGCCGAG
TCGGCGGCGGGGAAGTACCCCGTGGACGCGGTGATGATGCAGCAACGGGT
CATCCTGAGGGTGGAAGAAGATAAAGCCTACCGGAAGAACCTGGCCCGCT
CCAACCCGAACCGTGTTGAGAAATCCGCCACGGACGCGATCACGAACGCG
GCCCGAGAAATCGCCGCCACGATTGGGGCCTGTGCGTTGGTCGTCTTCAC
CGCGAGGGGGACGACGGTGCTCCGTGCCTCCATGGGCCGGCCGGGGGTGC
CCATCTTGGCTATTACTCCGGAAATCGAAACGGCGCGGTCCTTAGCCTTG
ACCTGGGGCGTATACCCGGCCGCTGTGGAGACACGCGCGGAGCATGAAAC
CTTCCCGGACGTGTTGCACAAAATCTGCTCGGTGGCGAAGGACAAGGGCC
TAGCAAATCGGCCGGACGACCTCCTGGTGGTGACTGCCGGCTTGCCCTTT
GGCTCCCCCGGCGTCGCGAACGTGATCCGGGTGGTGCCCGCGTCGGGGCC
GGAGGACTGGGTGGTGGGCGGCGACAAGAACCTGAACACGATTTAAAGTC
TCAGCAAGGGCAGGAGGAGGCAGGGGAGGAAAGCGGGAGGCGTTCTGTTT
CATTATAGTTTCAAAGACAAGGGGTGTAAGCGCGCCGTTCCCTGTCGCTC
GATGTTCTGTATGTTGAAGCGTTTTGATTGTATCGTCTAGAAGCAGCTTG
CCTAAGTGCGTGGACGTGCGGGTGAAGGGGTTCGCTAGACGACTCTTTGG
AGTTTCTCGCTGTCGCGTGATTTTCGTTGTGTTAAAACCACAGAGCCGTG
AGCTGTGGGAACAGCAATCCGCAGCATGTCTCATGCGAAGGATATATGGA
AAGGCGAATCATTCCCGGACATCCTCAAAAAGGCTATTGACATGCCATCG
GCGGTTACTTGTAGGTCATAATCCTGGGTTCTTTCGTCACGACTCTTAAG
AAAGAATCGGCAACCCCATCCATCAAAAAATAAATTTTGGCAGCATCAGC
AACGAGATTAAAACCCCAATCGTAGCAATCGTGAAAAAAGAGTTT back to topprotein sequence of rna4491 >rna4491-protein ID=rna4491-protein|Name=rna4491|organism=Nannochloropsis gaditana|type=polypeptide|length=315bp
MASKFTMVDPAQGDDVYQHMAQTVNDRMGKAVEELRQKNDERTAASQSGA
SMPDEDTSVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQEE
IVQKLQESHLLSDEEDDEAEDSLDPEFKLIRERRLAELKAQHQEKVDNMS
KGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTH
VETKFLKINAEKAPFFVGKLHVKILPTVIFFKDSIAEERLQGFEGLADGQ
PKGEEDEFPTARVAARLGKLEAIDYTAPPTLDELRRFHLSQHAAIRGGTA
TTCDDDEDLDGCLSD back to topmRNA from alignment at CM002463.1:723927..725144+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4491 ID=rna4491|Name=rna4491|organism=Nannochloropsis gaditana|type=mRNA|length=1218bp|location=Sequence derived from alignment at CM002463.1:723927..725144+ (Nannochloropsis gaditana)
CAGAAGAGTGCAAGATCCCGCTTCTAAAAAAATCGAAAGAGCAATTGTTT
GGAGGAGTGAGAATGTTAGTGAAGTCTCATCCATATATCTTGGTTTTTAA
TCTACCCCTCAGAGCCCCCTTTGTCCTTTCCTCAAGCCATGGCCAGCAAG
TTCACCATGGTAGACCCCGCCCAAGGGGATGACGTTTACCAGCACATGGC
ACAGACAGTCAATGATCGAATGGGTAAGGCTGTGGAAGAACTGCGACAAA
AGAATGACGAGCGGACAGCCGCATCGCAAAGTGGGGCTTCGATGCCCGAT
GAGGATACATCGGTAGACGGGCCTACAGGCAGCGCGTATAGACAAGTCGA
AGCACGAAAGCGTGCACAGCAGCATCGAGCTCAGGCGCGAATAAGGAAGT
CGAAGGAGCAAGCTGTCGATGCCGCGCGGCAAGAAGAAATCGTGCAAAAA
TTGCAGGAGTCACACCTGCTTTctgatgaagaggatgacgaagcAGAAGA
CAGCTTGGACCCTGAATTTAAACTCATCCGAGAAAGACGCCTTGCTGAAT
TGAAAGCTCAGCACCAAGAAAAGGTCGACAACATGAGCAAAGGTCACGGG
CAGTACCGTGAGATCACTCAGGATGAGTTTTTGCCGGAGGTGACAGGCTC
CCGTCGCGTCCTCGTTCACTTCTATCATAAGGACTTCATGCGGTGCAAGA
TCATGGACAAGCATCTTGCTTCCTTGGCTCCCACACACGTTGAGACCAAA
TTCCTCAAGATTAATGCCGAGAAGGCCCCCTTCTTTGTGGGCAAGCTGCA
CGTAAAAATCCTTCCCACTGTAATCTTTTTCAAAGACAGCATCGCGGAGG
AGCGCCTGCAAGGCTTTGAAGGGCTGGCAGACGGACAAcccaagggggaa
gaagatgagtTCCCGACGGCCAGAGTAGCAGCGCGGCTGGGTAAGCTAGA
GGCGATCGACTACACGGCGCCACCCACCCTGGACGAGCTTCGCCGATTCC
ATTTGAGCCAGCACGCCGCCATCCGTGGTGGCACCGCGACAACTTgtgat
gacgacgaggatcTGGACGGGTGCCTGTCAGACTGAACTCTGgcgggaca
gaggggagCGAGAAAGTGCAGTTGCACTTTTGTTTTTATAAGCGAGTACG
GCTCAAGTAAACGCAGGGAGAACACATATTCACAACACCACGTGAAAGAA
ATTAAGACAAGCGCCGTC back to topCoding sequence (CDS) from alignment at CM002463.1:723927..725144+ >rna4491 ID=rna4491|Name=rna4491|organism=Nannochloropsis gaditana|type=CDS|length=948bp|location=Sequence derived from alignment at CM002463.1:723927..725144+ (Nannochloropsis gaditana)
ATGGCCAGCAAGTTCACCATGGTAGACCCCGCCCAAGGGGATGACGTTTA
CCAGCACATGGCACAGACAGTCAATGATCGAATGGGTAAGGCTGTGGAAG
AACTGCGACAAAAGAATGACGAGCGGACAGCCGCATCGCAAAGTGGGGCT
TCGATGCCCGATGAGGATACATCGGTAGACGGGCCTACAGGCAGCGCGTA
TAGACAAGTCGAAGCACGAAAGCGTGCACAGCAGCATCGAGCTCAGGCGC
GAATAAGGAAGTCGAAGGAGCAAGCTGTCGATGCCGCGCGGCAAGAAGAA
ATCGTGCAAAAATTGCAGGAGTCACACCTGCTTTctgatgaagaggatga
cgaagcAGAAGACAGCTTGGACCCTGAATTTAAACTCATCCGAGAAAGAC
GCCTTGCTGAATTGAAAGCTCAGCACCAAGAAAAGGTCGACAACATGAGC
AAAGGTCACGGGCAGTACCGTGAGATCACTCAGGATGAGTTTTTGCCGGA
GGTGACAGGCTCCCGTCGCGTCCTCGTTCACTTCTATCATAAGGACTTCA
TGCGGTGCAAGATCATGGACAAGCATCTTGCTTCCTTGGCTCCCACACAC
GTTGAGACCAAATTCCTCAAGATTAATGCCGAGAAGGCCCCCTTCTTTGT
GGGCAAGCTGCACGTAAAAATCCTTCCCACTGTAATCTTTTTCAAAGACA
GCATCGCGGAGGAGCGCCTGCAAGGCTTTGAAGGGCTGGCAGACGGACAA
cccaagggggaagaagatgagtTCCCGACGGCCAGAGTAGCAGCGCGGCT
GGGTAAGCTAGAGGCGATCGACTACACGGCGCCACCCACCCTGGACGAGC
TTCGCCGATTCCATTTGAGCCAGCACGCCGCCATCCGTGGTGGCACCGCG
ACAACTTgtgatgacgacgaggatcTGGACGGGTGCCTGTCAGACTGA back to top
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