EWM26210.1, cds4429 (CDS) Nannochloropsis gaditana

Overview
NameEWM26210.1
Unique Namecds4429
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:594337..595436 -
Alignment locationCM002463.1:593979..594219 -
Alignment locationCM002463.1:593781..593903 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26210.1
Productmeiotic recombination protein spo11 isoform 2
Orig transcript idgnl|cribi|Naga_100025g52.7501.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:594337..595436 -
CM002463.1supercontigCM002463.1:593979..594219 -
CM002463.1supercontigCM002463.1:593781..593903 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0000003reproduction
GO:0007049cell cycle
GO:0016043cellular component organization
GO:0009056catabolic process
GO:0006259DNA metabolic process
GO:0000737DNA catabolic process, endonucleolytic
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005694chromosome
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0003824catalytic activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR011991WHTH_DNA-bd_dom
IPR013049Spo11/TopoVI_A_N
IPR002815Spo11/TopoVI_A
Homology
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|585108209|gb|EWM26210.1| (meiotic recombination protein spo11 isoform 2 [Nannochloropsis gaditana])

HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0
Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0
Query:    1 MEFTFTHDAEAFATPADKMQAREFLELPSYAAAFYSSNHPPFPPTSPVAQPSSLLTSANGKHNDDLSSSTSSFPNTTPFPARIDQSSHDASGVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMPESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYLT 487
            MEFTFTHDAEAFATPADKMQAREFLELPSYAAAFYSSNHPPFPPTSPVAQPSSLLTSANGKHNDDLSSSTSSFPNTTPFPARIDQSSHDASGVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMPESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYLT
Sbjct:    1 MEFTFTHDAEAFATPADKMQAREFLELPSYAAAFYSSNHPPFPPTSPVAQPSSLLTSANGKHNDDLSSSTSSFPNTTPFPARIDQSSHDASGVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMPESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYLT 487          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|669143064|ref|XP_008607094.1| (hypothetical protein SDRG_03242 [Saprolegnia diclina VS20] >gi|530741580|gb|EQC39822.1| hypothetical protein SDRG_03242 [Saprolegnia diclina VS20])

HSP 1 Score: 197.978 bits (502), Expect = 3.141e-55
Identity = 132/391 (33.76%), Postives = 202/391 (51.66%), Query Frame = 0
Query:   97 IAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYL 486
            ++R E++ RI++   A++  L ++  +   TF   +R  +   +          C  L     G+   IK  S     SAR Y  ++ +L  +H++LL ++  T RE++Y     H  F  Q + D  +LD + LL V R  L I+G  KG   G   +R   + + W +C   G  G+        L+        +E E +     +YI+VVEKE +F RL G+ L       +L+TGKG+PDLATR  VK L D   +PV+GLCDCNP G+++LL++K GS RMP +S AY + + W+GLRP       +LPD     FS+ D  +  SL   PF Q    +R EV+      LK ELEAL+T    KG   F+++Y+ + +L+ +Y+
Sbjct:    9 LSRAEILRRIQDVFQAFLEDLMNDTFT---TFHTLKRATSAMTF---------DCDALTLSHGGEKRAIKMTS----ASARKYTGMWLVLQIAHQLLLEDKTVTQRELYY----LHPFFTSQQEADECILDVSGLLCVPRECLNIIGGVKGYFTGRLCYR--SADKQWIDCSLNGASGQP---ISRELLR-------LESEDMTSD-AQYIIVVEKEGIFNRL-GEDLFYNRVPCILVTGKGFPDLATRIFVKKLRDTLRIPVLGLCDCNPFGLSILLSFKFGSARMPLDSVAYAVDMHWVGLRPLD-TALLELPDVVHTKFSKHDTRRLQSLTAHPFVQMDAAYRAEVQHWTKHPLKIELEALHT----KG-FGFITEYLEAQVLARNYI 359          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|953500418|emb|CEG38127.1| (type ii dna topoisomerase vi subunit a 2 [Plasmopara halstedii])

HSP 1 Score: 193.356 bits (490), Expect = 1.355e-53
Identity = 127/393 (32.32%), Postives = 212/393 (53.94%), Query Frame = 0
Query:   98 AREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEV-ECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHL--KCELEALNTFSGSKGRRDFLSQYVVSALLSGDYL 486
            +R +++ RIE     ++ +LS+ ++ +    +  +RT ++ +Y   +R+N    Q+   +K+   + + +  +GGR     Y  I+ IL  +H +L  N+ AT R+V+Y     H  FK Q++ D A+LDA S+LGV+R  + I+ A KG   G       G  R +       G+GE          ++    +++++ +   +   + I+V+EK+ +F RL  D        I L+TGKG+PDLATR  V  L  A  +PV+G+CDCNP G++++LTYK GS RMP ES  Y + + W+G+RPSQ+     LP  +F+  S  D++  +SLM + F QA + +R EV     + L  K ELEAL+    +     FL+ ++   +  GD++
Sbjct:    6 SRYDILRRIETLAAEFLESLSNGNVLK---LKALKRTSSSMVY---DREN----QRQIHMKETRLITLNR--QGGR----KYTGIWLILQTAHSLLAENKTATQRDVYY----LHPFFKGQSEADEAILDAGSILGVSRGSMNIIAATKGCFTGDISILRDGEWRYF-------GNGE----------ETSITHELLQLKQSELRSNAKIILVIEKDGIFNRLREDKFFDVVPSI-LVTGKGFPDLATRVFVSLLSKALRIPVLGVCDCNPFGLSIILTYKLGSARMPLESLQYAVDIKWIGVRPSQIS-NIALPASSFKVLSRKDVAVANSLMRASFIQADMHFRNEVHMWLGDALPWKIELEALHCLGFT-----FLTSFLQRCIEKGDFI 354          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|1173934941|gb|OQR86141.1| (hypothetical protein ACHHYP_10951 [Achlya hypogyna])

HSP 1 Score: 190.66 bits (483), Expect = 2.168e-52
Identity = 132/394 (33.50%), Postives = 197/394 (50.00%), Query Frame = 0
Query:   97 IAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHR---PRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYL 486
            +AREE+I RIEE   A++  L+ +  +   T  ++R T A              C        G+   IK  + G    AR Y  ++ +L  +H++L  N+  T RE++Y     H  F  Q + D  +LD + LL V R  L IVG  KG   G   ++   +   W +C   GG G         +       +  +++  G       +Y++VVEKE +F RL G+ L       +L+TGKG+PDLATR  VK L DA  VPV+GLCDCNP G+++ L+YK GS RMP +S AY + + W+GLRP       +LP      FS+ D  +   L+  PF Q +  +  EV+  A    K ELEAL+T    KG   +++ Y+ + +  G+Y+
Sbjct:   11 LAREEIISRIEETFLAFLEGLASDTFTVFHT--LKRATNAMDF----------DCDAQTLAHAGETRAIKMTTTG----ARKYTGMWLVLQIAHQLLRENKTVTQRELYY----LHPFFTTQQEADECILDVSGLLRVPRECLNIVGGVKGYFTGRICYQ--ETNNHWIDCSQDGGTGR-------PISRDILRLESHQMQIFGVFNLSDAKYVIVVEKEGIFNRL-GEDLFFNRVPCILVTGKGFPDLATRIFVKKLSDALRVPVLGLCDCNPFGLSIFLSYKFGSARMPLDSVAYAVDIKWVGLRPLD-AMALELPKVVRTKFSKHDKRRLQGLLAHPFVQTNAQYGAEVDEWARLPQKIELEALHT----KG-FGYITTYLEAQVRLGNYI 368          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|813117744|ref|XP_012195737.1| (hypothetical protein SPRG_19326 [Saprolegnia parasitica CBS 223.65] >gi|641539921|gb|KDO33716.1| hypothetical protein SPRG_19326 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 183.726 bits (465), Expect = 7.833e-50
Identity = 132/406 (32.51%), Postives = 205/406 (50.49%), Query Frame = 0
Query:   97 IAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTK--------ANSIYYPGERKN-----GESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAY--RIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYL 486
            ++R E++ RI++   A++  L ++      TF   +R          A ++ + GE++       E+ +QLP      G++              Y  ++ +L  +H++LL ++  T RE++Y     H  F  Q + D  +LD + LL V R  L IVG  KG  +G   +R   + + W +C   G  G         L     I+D            +YI+VVEKE +F RL G+ L       +L+TGKG+PDLATR  VK L D   VPV+GLCDCNP G+++LL++K GS RMP +S AY   + + W+GLRP       +LPD     FS+ D  +  SL+  PF Q    +R EV+      LK ELEAL+T    KG   F+++Y+ + +++ +Y+
Sbjct:    9 LSRAEILRRIQDVFQAFLEDLMNDSFM---TFHTLKRATSAMTFDCDALTLTHGGEKRAIKMACPEAHEQLP-----HGIM--------------YTGMWLVLQIAHQLLLEDKTVTQRELYY----LHPFFTTQQEADECILDVSGLLCVPRECLNIVGGVKGYFSGRLCYR--SADKQWIDCSLDGASGRPISRELLRLESEDMISDA-----------QYIIVVEKEGIFNRL-GEDLFFNRVPCILVTGKGFPDLATRIFVKKLRDTLRVPVLGLCDCNPFGLSILLSFKFGSARMPLDSVAYGTSVDMHWIGLRPLD-TASLELPDIVHTKFSKHDTRRLQSLVAHPFVQMDAAYRAEVQHWMKHPLKIELEALHT----KG-FGFITEYLEAQVMARNYI 368          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|698783387|ref|XP_009824737.1| (hypothetical protein H257_02688 [Aphanomyces astaci] >gi|574120787|gb|ETV86265.1| hypothetical protein H257_02688 [Aphanomyces astaci])

HSP 1 Score: 182.185 bits (461), Expect = 2.311e-49
Identity = 132/390 (33.85%), Postives = 200/390 (51.28%), Query Frame = 0
Query:  101 EVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRV--WGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWIT-DVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIPLCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFLSQYVVSALLSGDYL 486
            +V+ RIE+   A    L D  + E  + +  RR+ ++++ +  E +          L  G  +   +L+  G   AR Y  I+ +L  +H++LL ++  T RE++Y     H  F+ Q + D ++LD    LGV R  L IVG  KG   G    +V  +     W +C   G  G               IT D++ +    +   R+I+V+EK+ +      + L   A   +L+TGKG+PDLATR  VK L D   VPV+GLCDCN  G+++LLTYK GS RMP +S  Y + + WLGLRPSQL+   +LP+   +  +  D  +  SLM  PF Q    +R E++   ++  K ELEAL+T    KG   FL Q+V  ++L  DY+
Sbjct:    4 KVLRRIEQ---AATTFLEDLMMDEMTSLQTIRRS-SSALEFDSESQV---------LSHGGNMRTIRLNSQG---ARKYTGIWLVLQTAHQLLLEDKSITQRELYY----LHPFFESQKEADESILDTGGFLGVPRECLNIVGGVKGCFTGRMSIQVDHYYENGQWVDCAKDGPSGRP-------------ITRDILRLHH-DQIDARFILVIEKDGIMS---AEDLFFDAMPCILVTGKGFPDLATRCFVKKLSDFLQVPVLGLCDCNSFGLSILLTYKFGSARMPLDSIHYAVDIQWLGLRPSQLE-ALELPNVVKKKCTNQDKRRMKSLMLHPFVQMQPQYRHEIDLWLADPYKVELEALHT----KG-FGFLGQFVQDSILHVDYI 350          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|1123987132|ref|XP_019604124.1| (PREDICTED: meiotic recombination protein SPO11 isoform X1 [Rhinolophus sinicus])

HSP 1 Score: 181.8 bits (460), Expect = 9.505e-49
Identity = 112/383 (29.24%), Postives = 181/383 (47.26%), Query Frame = 0
Query:   92 GVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIP-LCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFL 472
            G TH  +  EV+  IE  I   I +L+ N   E P F +  R+   +I +          +   GL+       +K+      S +++A I  IL+  ++++ SN  AT R+++Y        F  QA  D  + D + +L V R  L I+  +KGL+AG+ R+   G  +    C           G    + D+                 +++++VEK+  F+RL+ D    +    +++TGKG PDL TR  +K L D F +P+  L D +PHGI ++  YK GS  M  E+    +P + WLGL PS +K R ++P DT    ++ D  K  S++  P+      WR+E+E MA   +K E++AL   S     R +L
Sbjct:   37 GGTHLASSSEVLASIENIIQDIITSLARN---EAPAFTIDNRSSWENIKF----------EDSVGLQMVSHCTTRKIKSDSPKSVKNFALILKILSMIYKLVQSNTYATKRDIYY---TDSQLFGNQAIVDNIINDVSCMLKVPRRCLHILSTSKGLIAGNLRYIEEGGTKVSCSCATAVAVPSNIQGIRNLITDA-----------------KFLLIVEKDATFQRLLDDNFCSKVSPCIMVTGKGVPDLNTRLLIKKLWDTFHIPIFTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIK-RLNIPKDTLIPLTKRDQMKLDSILKRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 385          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|725579221|ref|XP_010341443.1| (PREDICTED: meiotic recombination protein SPO11 isoform X1 [Saimiri boliviensis boliviensis])

HSP 1 Score: 181.03 bits (458), Expect = 1.673e-48
Identity = 118/382 (30.89%), Postives = 181/382 (47.38%), Query Frame = 0
Query:  101 EVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTL------IDSCW--ITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIP-LCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFL 472
            EV+  IE  I   I +L+ N   E P F +  R+   +I +          +   GL+       +K+      S + +A I  IL+  ++++ SN  AT R+++Y        F  Q   D  + D + +L V+R  L I+  +KGL+AG+ R+          E DG     +    CG T       I   W  +TD            ++I++VEK+  F+RL+ D    +    ++ITGKG PDL TR  VK L D F +PV  L D +PHGI ++  YK GS  M  E+    +P + WLGL PS LK R ++P D+    ++ D  K  S++  P+      WR+E+E MA   +K E++AL   S     R +L
Sbjct:   46 EVLASIENIIQDIITSLARN---EAPAFMIENRSSWENIKF----------EDSVGLQMASHCTTRKIKSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDSQLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYI---------EEDGT----KVNCTCGATAVAVPSNIQGIWNLVTDA-----------KFILIVEKDATFQRLLDDNFCNKMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEIMFIYKYGSMSMAFEAHHLTVPAIRWLGLLPSDLK-RLNVPKDSLIPLTKSDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 386          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|589945444|ref|XP_006985405.1| (PREDICTED: meiotic recombination protein SPO11 isoform X1 [Peromyscus maniculatus bairdii])

HSP 1 Score: 179.489 bits (454), Expect = 7.644e-48
Identity = 112/384 (29.17%), Postives = 183/384 (47.66%), Query Frame = 0
Query:   91 SGVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTLIDSCWITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIP-LCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFL 472
            +G T   +  EV+  IE  I   I +L+ N++   P F +  R+   +I +          +   GL+       +K+      S + +A I  IL+  ++++ SN  AT R+++Y        F  QA  D  + D + +L V R  L ++  +KGL+AG+ R+      R    C+         +     LI     TD            +++++VEK+  F+RL+ D    +    +++TGKG PDL TR  VK L D F +PV  L D +PHGI ++  YK GS  M  E+ +  +P + WLGL PS +K R ++P D+    ++ D  K  S++  P+      WR+E+E MA   +K E++AL   S     R +L
Sbjct:   36 AGATRAASSSEVLTAIENIIQDIIKSLARNEV---PAFTIDNRSSWENIMF----------EDSVGLQMIPQCTTRKIKSDSPKSVKKFALILKILSMIYKLVQSNTYATKRDIYYT---DSQLFGNQAAVDNIIDDISCMLKVPRRSLHVLSTSKGLIAGNLRYMEEDGTRVQCTCNATATAVPSNIQGIRNLI-----TDA-----------KFLLIVEKDATFQRLLDDNFCSRMSPCIMVTGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHSLTVPTIRWLGLLPSDIK-RLNIPKDSLIPLTKHDQVKLDSILRRPYITYQPFWRKEMEMMADSKMKAEIQALTFLSSDYLSRVYL 386          
BLAST of EWM26210.1 vs. NCBI_GenBank
Match: gi|817304268|ref|XP_012322631.1| (meiotic recombination protein SPO11 isoform X1 [Aotus nancymaae])

HSP 1 Score: 179.104 bits (453), Expect = 9.609e-48
Identity = 120/392 (30.61%), Postives = 186/392 (47.45%), Query Frame = 0
Query:   91 SGVTHDIAREEVIGRIEEFICAWIATLSDNDISEPPTFEVRRRTKANSIYYPGERKNGESCQQLPGLKQGDGVVIKKLSEGGRGSARSYAAIFAILAFSHRILLSNQMATSREVWYNYKASHSCFKCQADCDRAVLDAASLLGVARHQLGIVGAAKGLMAGHFRFRVWGSGRAWNECDGGGGDGEGGLGCGGTL------IDSCW--ITDVMEVECLGKHRPRYIVVVEKECMFKRLIGDGLLGQAGGIVLITGKGYPDLATRACVKALVDAFAVPVVGLCDCNPHGIALLLTYKCGSFRMP-ESQAYRIP-LCWLGLRPSQLKRRFDLPDDTFQAFSEGDISKCSSLMDSPFCQAHLPWREEVETMASEHLKCELEALNTFSGSKGRRDFL 472
            SG +H  +  EV+  IE  I   I +L+ N   E P F +  R+   +I +          +   GL+       +K+      S + +A I  IL+  ++++ SN  AT R+++Y        F  Q   D  + D + +L V+R  L I+  +KGL+AG+ R+          E DG     +    CG T       I   W  +TD            +++++VEK+  F+RL+ D    +    ++ITGKG PDL TR  VK L D F +PV  L D +PHGI ++  YK GS  M  E+    +P + WLGL PS LK R ++P D+    ++ D  K  S++  P+      WR+E+E MA   +K E++AL   S     R +L
Sbjct:   36 SGGSHLASSSEVLASIENIIQDIITSLARN---EAPAFVIDNRSSWENIKF----------EDSVGLQMVSHCTTRKIKSDSPKSVQKFALILKILSMIYKLVQSNTYATKRDIYY---TDSQLFGNQTVVDNIINDISCMLKVSRRSLHILSTSKGLIAGNLRYI---------EEDGT----KVNCTCGATAVAVPSNIQGIWNLVTDA-----------KFVLIVEKDATFQRLLDDNFCNKMSPCIMITGKGVPDLNTRLLVKKLWDTFHIPVFTLVDADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLK-RLNVPKDSLIPLTKRDQMKLDSILRRPYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYL 386          
The following BLAST results are available for this feature:
BLAST of EWM26210.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108209|gb|EWM26210.1|0.000e+0100.00meiotic recombination protein spo11 isoform 2 [Nan... [more]
gi|669143064|ref|XP_008607094.1|3.141e-5533.76hypothetical protein SDRG_03242 [Saprolegnia dicli... [more]
gi|953500418|emb|CEG38127.1|1.355e-5332.32type ii dna topoisomerase vi subunit a 2 [Plasmopa... [more]
gi|1173934941|gb|OQR86141.1|2.168e-5233.50hypothetical protein ACHHYP_10951 [Achlya hypogyna... [more]
gi|813117744|ref|XP_012195737.1|7.833e-5032.51hypothetical protein SPRG_19326 [Saprolegnia paras... [more]
gi|698783387|ref|XP_009824737.1|2.311e-4933.85hypothetical protein H257_02688 [Aphanomyces astac... [more]
gi|1123987132|ref|XP_019604124.1|9.505e-4929.24PREDICTED: meiotic recombination protein SPO11 iso... [more]
gi|725579221|ref|XP_010341443.1|1.673e-4830.89PREDICTED: meiotic recombination protein SPO11 iso... [more]
gi|589945444|ref|XP_006985405.1|7.644e-4829.17PREDICTED: meiotic recombination protein SPO11 iso... [more]
gi|817304268|ref|XP_012322631.1|9.609e-4830.61meiotic recombination protein SPO11 isoform X1 [Ao... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4440rna4440Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications