EWM26220.1, cds4427 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|585108219|gb|EWM26220.1| (peptidyl-prolyl cis-trans isomerase cyclophilin type [Nannochloropsis gaditana]) HSP 1 Score: 606.29 bits (1562), Expect = 0.000e+0 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 Query: 1 MVYKCLQRLLLFFFLSLSHAQEHRGVTEINGTLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADEDYLRRDFPKLDYMKDCAIIPASAKKASIQEDRGRREETKRVVVGEERVPEETLNALSNARDKEPAWTEEWPYTWWGLLWVLGGLFGFLTMMWKLNNVKSLGKAR 294 MVYKCLQRLLLFFFLSLSHAQEHRGVTEINGTLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADEDYLRRDFPKLDYMKDCAIIPASAKKASIQEDRGRREETKRVVVGEERVPEETLNALSNARDKEPAWTEEWPYTWWGLLWVLGGLFGFLTMMWKLNNVKSLGKAR Sbjct: 1 MVYKCLQRLLLFFFLSLSHAQEHRGVTEINGTLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADEDYLRRDFPKLDYMKDCAIIPASAKKASIQEDRGRREETKRVVVGEERVPEETLNALSNARDKEPAWTEEWPYTWWGLLWVLGGLFGFLTMMWKLNNVKSLGKAR 294
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|298706059|emb|CBJ29169.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 182.956 bits (463), Expect = 1.813e-52 Identity = 95/197 (48.22%), Postives = 125/197 (63.45%), Query Frame = 0 Query: 17 LSHAQEHRGVTEINGTLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPP--PSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMD-VIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAII 209 L + E G T T V+C TT A+ AF E+ W+P GAERF+ LV YFTDV FR V FL QFGI P S +K WRE+G I DDP+ RG LSFAG+GPN+R TQ+FI AD LGK+PWE P+G V +GMD V+D Y GYG+ PFN++G+ Q + + + YLR +FP++ Y+K+C ++ Sbjct: 9 LGISNEEEGKT----TRVQC-TTTASPEAFTLEVYHSWSPNGAERFVDLVKDDYFTDVALFRCVKNFLVQFGISPYVSSPKKKFWREKGPIKDDPNLQISFKRGMLSFAGSGPNSRGTQVFITFADIPHLGKTPWETPLGIVTQGMDTVVDKFYTGYGDQQPFNQDGINQGTLQSRGNAYLREEFPEISYLKECRVV 200
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1085032720|gb|OGS37827.1| (peptidylprolyl isomerase [Elusimicrobia bacterium RIFOXYA2_FULL_69_6]) HSP 1 Score: 161.384 bits (407), Expect = 1.240e-45 Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 0 Query: 46 FIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAIIP 210 F+ EI +WAP GA+RF +LV SG+F DV FFR + GF+ QFGI AV +WR +IPDDP+ R RG L+FA AGP TR TQLFI D+ L + P+G+V EGM V+D+LY GYGE +P + G +Q ++ A+ + YL+RDFPKLDY+K ++P Sbjct: 13 FVIEIHRDWAPRGADRFYELVKSGFFQDVAFFRAIDGFMVQFGIHGDPAVSAKWRGA-NIPDDPASGRSNSRGALTFATAGPGTRTTQLFINFGDNGNLDGMGF-TPIGQVAEGMSVVDSLYKGYGEGAP-SGMGPDQGRVQAEGNAYLKRDFPKLDYIKSAQLVP 175
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1125152288|gb|OLB08743.1| (peptidylprolyl isomerase [Gemmatimonadetes bacterium 13_2_20CM_69_27] >gi|1125208339|gb|OLB59845.1| peptidylprolyl isomerase [Gemmatimonadetes bacterium 13_2_20CM_2_69_23] >gi|1125428967|gb|OLD58517.1| peptidylprolyl isomerase [Gemmatimonadetes bacterium 13_1_20CM_69_28]) HSP 1 Score: 146.747 bits (369), Expect = 7.341e-40 Identity = 83/165 (50.30%), Postives = 105/165 (63.64%), Query Frame = 0 Query: 46 FIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAII 209 F+ E+ +WAPFGA+RF LV SGY+ D FFRV+ GF+ QFGI V WR + IPDDP + RG +SFA AGP TR TQLFI AD+S L + P GRV+ GMDV+D LY GYGE +P + G Q +I A+ + YL R+FPKLD +K I+ Sbjct: 20 FVVEVHRDWAPFGADRFYNLVKSGYYDDARFFRVITGFMAQFGIHGDPHVAAVWR-DARIPDDPVRQHN-SRGAVSFATAGPGTRTTQLFINYADNSRLDGMGFS-PFGRVVLGMDVVDRLYPGYGEGAPGGR-GPNQGRIQAEGNAYLTREFPKLDRIKRATIV 180
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1125336441|gb|OLC77220.1| (peptidylprolyl isomerase [Gemmatimonadetes bacterium 13_1_40CM_4_69_8]) HSP 1 Score: 146.747 bits (369), Expect = 8.723e-40 Identity = 79/167 (47.31%), Postives = 106/167 (63.47%), Query Frame = 0 Query: 44 AAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAII 209 AF+ +++ +WAP GA+RF LV SGYF FFRV+PGF+ QFGI V WRE +I DDP + RG +SFA AGP TR TQLF+ D+S L + P GRV++GMDV+D LY GYGE +P + G +Q + A + YL R FP+LDY++ +I+ Sbjct: 33 GAFVIQVQRDWAPLGADRFYNLVKSGYFAGARFFRVIPGFMAQFGIHGDPPVAAAWREA-TIADDPVRQHNT-RGAVSFATAGPGTRTTQLFVNYGDNSQLDGMGF-APFGRVVDGMDVVDRLYGGYGEGAPRGR-GPDQGLVQAQGNAYLERAFPQLDYVRVASIV 195
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1085046077|gb|OGS48617.1| (peptidylprolyl isomerase [Elusimicrobia bacterium RIFOXYB2_FULL_62_6]) HSP 1 Score: 145.976 bits (367), Expect = 1.383e-39 Identity = 79/177 (44.63%), Postives = 113/177 (63.84%), Query Frame = 0 Query: 34 VKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAII 209 VK T+ + F E+ +WAP GA+RF LV +GYFTD+ FFRVV GF+ QFGI AV +WR E I DDP + +G L++A AGP+TR TQLFI ++++L + P G+V EGM V+D+LY+GYGE +P G +Q +I + + YL++DFPK+DY+ ++ Sbjct: 20 VKFKTSKGD---FTVEVYKDWAPLGADRFYNLVKAGYFTDIAFFRVVSGFMVQFGIHGDPAVSAKWR-EARIQDDPVKQSNA-KGNLTYAMAGPDTRTTQLFINFGNNAFLDSQGFP-PFGKVTEGMSVVDSLYSGYGEGAP-RGMGPDQGRIQMEGNAYLKKDFPKMDYILSAEVL 189
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1084936032|gb|OGR53360.1| (peptidylprolyl isomerase [Elusimicrobia bacterium GWA2_62_23]) HSP 1 Score: 145.976 bits (367), Expect = 1.557e-39 Identity = 79/177 (44.63%), Postives = 111/177 (62.71%), Query Frame = 0 Query: 34 VKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAII 209 VK TT + F EI +W+P GA+RF LV +GYFTDV FFRV+ GF+ QFGI V WR I DDP + +GY+S+A AGPNTR TQLFI ++ L + P G+V EGMDV++++Y+GYGE +P + G +Q ++ + YL++DFPK+DY+K ++ Sbjct: 20 VKFKTTKGD---FTLEITRDWSPLGADRFYNLVKAGYFTDVAFFRVIEGFMVQFGIHGDPEVSAAWR-GARIQDDPVKQSNA-KGYISYAMAGPNTRTTQLFINYGNNGRLDDMGFS-PFGKVTEGMDVVESIYSGYGEGAP-SGMGPDQGRVQMQGNAYLKKDFPKMDYIKSAELL 189
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1084997990|gb|OGS08632.1| (peptidylprolyl isomerase [Elusimicrobia bacterium RIFOXYA12_FULL_51_18] >gi|1085021810|gb|OGS28657.1| peptidylprolyl isomerase [Elusimicrobia bacterium RIFOXYA2_FULL_53_38]) HSP 1 Score: 145.591 bits (366), Expect = 2.559e-39 Identity = 74/164 (45.12%), Postives = 107/164 (65.24%), Query Frame = 0 Query: 46 FIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAI 208 F ++ WAP GA+RF LV GYFTD+ FFRV+ GF+ QFGI AV +WRE G D P+Q+ L+GY+++A AGP+TR TQLFI D+S L + P G+V +GM+V++++Y+GYGE +P + G EQ + + Y ++DFPKLDY+ ++ Sbjct: 29 FTVDVTRAWAPLGADRFYNLVKIGYFTDLAFFRVISGFMVQFGIHGDPAVSAKWREAGIADDVPAQSN--LKGYITYAMAGPDTRTTQLFINYGDNSRLDSMNF-APFGKVTKGMEVVESIYSGYGEGAP-SGMGPEQGRAQMQGNAYFKKDFPKLDYITSASL 188
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1084948510|gb|OGR64255.1| (peptidylprolyl isomerase [Elusimicrobia bacterium GWB2_63_22]) HSP 1 Score: 142.895 bits (359), Expect = 2.160e-38 Identity = 77/177 (43.50%), Postives = 109/177 (61.58%), Query Frame = 0 Query: 34 VKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAII 209 VK TT AF E+ W+P GA+RF LV +GYF D+ FFRV+ GF+ QFGI AV WR I DDP + +GY+SFA AGPNTR TQ+FI D+ L + P G+V EGMDV++++Y+GYGE +P + G +Q ++ + YL+ +FP++DY+K ++ Sbjct: 20 VKFDTTKG---AFTLEVTRAWSPLGADRFYNLVKNGYFADIAFFRVISGFMVQFGIHGDPAVASAWR-GARIQDDPVKQSNT-KGYISFAMAGPNTRTTQMFINFGDNERLDGMGFS-PFGKVTEGMDVVESIYSGYGEGAP-SGMGPDQGRVQMQGNAYLKAEFPRMDYIKSAQLL 189
BLAST of EWM26220.1 vs. NCBI_GenBank
Match: gi|1063645254|gb|ODR93473.1| (peptidylprolyl isomerase [Methyloceanibacter superfactus]) HSP 1 Score: 142.895 bits (359), Expect = 2.266e-38 Identity = 77/164 (46.95%), Postives = 104/164 (63.41%), Query Frame = 0 Query: 46 FIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSAVRKRWREEGSIPDDPSQNRQILRGYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGMDVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAI 208 F+ E+ +W+P GA+RF LV +GY+ DV FFRV+ GF+ QFGI + WR E IPDD + RGY+SFA AGP TR TQ+FI D++ L + P G+V+ GMDV+DALY GYGE +P + G +Q ++ + + YL DFPKLDY+K I Sbjct: 20 FVIEVHRDWSPNGADRFYNLVKNGYYNDVRFFRVIDGFMVQFGISGNPDLSAVWR-EARIPDDKVKESN-QRGYVSFATAGPGTRTTQVFINFGDNAGLDGQGFS-PFGQVVSGMDVVDALYNGYGEGAPRGR-GPDQGRMQMEGNAYLMTDFPKLDYVKKATI 179 The following BLAST results are available for this feature:
BLAST of EWM26220.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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