EWM26266.1, cds4406 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|585108266|gb|EWM26266.1| (alkylated dna repair protein alkb-like protein [Nannochloropsis gaditana]) HSP 1 Score: 958.362 bits (2476), Expect = 0.000e+0 Identity = 469/469 (100.00%), Postives = 469/469 (100.00%), Query Frame = 0 Query: 1 MPPPTCSKEANRYKVSHLEERDDTAYRRAEKQYRRQRVPVNKRRNRFVRRDPDLAHAIDFAKRGSRMDQRVLLLETVEGGREIYSVRDRPGFYYIRGALTWQAQVRWARRCLTEFSRSPFTNITNHIRLALRPARDMECPHQSGQEALWDAAVRRVESEGWEGGDEEDGEEKRTGQALQQALQDLYALRWANLGANYIWTTRKYAVPVKEAAKEETGRGGGLREGETVRDSGGPHATNRDEEGGAQGTPSSVHSRVRNLHEGKVGAEEVGLPERAAFPPSDGLPVPQALTDLAREVLEDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVWRRELCEGAEGLRP 469 MPPPTCSKEANRYKVSHLEERDDTAYRRAEKQYRRQRVPVNKRRNRFVRRDPDLAHAIDFAKRGSRMDQRVLLLETVEGGREIYSVRDRPGFYYIRGALTWQAQVRWARRCLTEFSRSPFTNITNHIRLALRPARDMECPHQSGQEALWDAAVRRVESEGWEGGDEEDGEEKRTGQALQQALQDLYALRWANLGANYIWTTRKYAVPVKEAAKEETGRGGGLREGETVRDSGGPHATNRDEEGGAQGTPSSVHSRVRNLHEGKVGAEEVGLPERAAFPPSDGLPVPQALTDLAREVLEDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVWRRELCEGAEGLRP Sbjct: 1 MPPPTCSKEANRYKVSHLEERDDTAYRRAEKQYRRQRVPVNKRRNRFVRRDPDLAHAIDFAKRGSRMDQRVLLLETVEGGREIYSVRDRPGFYYIRGALTWQAQVRWARRCLTEFSRSPFTNITNHIRLALRPARDMECPHQSGQEALWDAAVRRVESEGWEGGDEEDGEEKRTGQALQQALQDLYALRWANLGANYIWTTRKYAVPVKEAAKEETGRGGGLREGETVRDSGGPHATNRDEEGGAQGTPSSVHSRVRNLHEGKVGAEEVGLPERAAFPPSDGLPVPQALTDLAREVLEDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVWRRELCEGAEGLRP 469
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|168050410|ref|XP_001777652.1| (predicted protein [Physcomitrella patens] >gi|162670995|gb|EDQ57554.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 152.14 bits (383), Expect = 6.877e-38 Identity = 136/445 (30.56%), Postives = 199/445 (44.72%), Query Frame = 0 Query: 24 TAYRRAEKQYRR-QRVPVNKRRNRFVRRD----PDLAHAIDFAKRGSRMDQRVLLLETVEG-GREIYSVRDRPGFYYIRGALTWQAQVRWARRCLTEFSRSPFTNITNHIRLALRPARDMECPHQSGQEALWDAAVRRVESEGWEGGDEEDGEEKRTGQALQ----QALQDLYALRWANLGANYIWTTRKYAVPVKEAAKEETGRGGGLREGETVRDSGGPHATNRDEEGGAQGTPSSVHSRVRNLHEGKVGAEEVGLPERAAFPPSDGLP---VPQALTDLAREVLEDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQV 455 TA+R EK Y+R V K RN+ RR D++ +DF K G + + + VEG G +Y++ PGFY+I AL Q+ WA CLT F + P N TNH + P ++ Q + L + A + E + E +++ +++ + D+ + N I T+ G GG E RD + D + S + VR L VG + +RA ++ LP +P L DLAR + + E +F+ EA IVN+Y P+ +GGHVDD E S P+VS SLG +FLLGG ++ P + RSGD ++MAG AR FHGVP I E+ + L +T ++ V DG + R + YL SSR+N N+RQV Sbjct: 14 TAFRSTEKAYKRYTHVSSAKSRNQHSRRAQVPATDVSKVLDFKKLGEDGEYNIEGVSRVEGSGWPVYTIDKHPGFYFIPEALNKAEQLYWATECLTTFPQPP--NRTNHNAM-YGPIANLWAAFQENK-ILVEVASGKQERDLISNSAETRSVDEKISDSIESVRAEVSDDITVVEKNRFHDNGITTS--------------GGDGGNSWE---FRD------CSTDFLKTSSAKTVSSETLVRKLRWATVGIQ-FDWSKRAY---NEALPFQEIPPKLADLARRLAKPAMENE-----------------DFKAEAAIVNFYGPDDMLGGHVDDMEADMSKPIVSISLGCKAIFLLGGTTRDEPPAAMFVRSGDVVLMAGPARHCFHGVPRIFSEAK--ESELPDFTSMSDV----DG----IQPRSIVKYLESSRINVNIRQV 400
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|293332709|ref|NP_001168927.1| (uncharacterized LOC100382739 [Zea mays] >gi|223973785|gb|ACN31080.1| unknown [Zea mays]) HSP 1 Score: 141.354 bits (355), Expect = 6.455e-34 Identity = 139/460 (30.22%), Postives = 197/460 (42.83%), Query Frame = 0 Query: 24 TAYRRAEKQYRRQRVPVNKRRNRFVRRD-----------PDLAHAIDF----AKRGSRMDQRVLLLETVEGGREIYSVRDRPGFYYIRGALTWQAQVRWARRCLTEF----SRSPFTNITNHIRLALRPARDMECPHQSGQEALWDAAVR-----RVESEGWEGGDEED--GEEKRTGQALQQALQDLYALRWANLGANYIWTTRKYAVPVKEAAKEETGRGGGLREGETVRDSGGPHATNRDEEGGAQGTPSSVHSRVRNLHEGKVGAEEVGLPERAAFPPSDGLPVPQALTDLAREVLEDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPD-PALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 TA+RRAEKQY+ + K R+R R DL+ +DF A G D + E R ++ DRPGFY+I GAL+ + Q W R L F +R+ T I I L A + + ++ + + + + ES+ ++ D E GEE R+ A + LRW+ LG + W+ R T+R S P +Q P S V ++ V LP +P AL LA+++ P GE F+ EA IVNYY P +GGHVDD E + P+VS SLG C+FLLGGK ++ P + RSGD ++MAGEAR FHGVP I ES + PAL ++ + DD + Y+ +SR+N N+RQV+ Sbjct: 13 TAFRRAEKQYKLYKTLNVKGRSRSRSRSGCRPSSGEGGGADLSAVVDFHALLAADGELPDG-IGRRECPGFDRPVFCFLDRPGFYFIPGALSTEEQCCWIRESLKTFPQPPNRTNLTAIYGSISDLLIAAENQQILVEAENPDIQERNKQNNCGGKTESKYFKFVDSESQKGEEHRSNAATTLVRK----LRWSTLGLQFDWSKR------------------------TIR-SKSPR--------NSQEKPLSSSRLVERNYD-------VSLPHNK---------IPGALASLAKKM---------AIPAMPSGEE-------FKPEAAIVNYYGPSDMLGGHVDDMEADWTKPIVSISLGCKCIFLLGGKTRDEVPTAMFLRSGDIVLMAGEARERFHGVPRIFTESDQQEIPAL-----ISQLSSGDD--------VFILEYIKNSRININIRQVY 389
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|511000366|gb|EPB81909.1| (hypothetical protein HMPREF1544_11360 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 124.02 bits (310), Expect = 1.291e-27 Identity = 67/179 (37.43%), Postives = 103/179 (57.54%), Query Frame = 0 Query: 281 DGLPVPQALTDLAREV---LEDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 D +P+P A++DL + V EDI E+ P ++ + A +F+ EAGI+N+Y +S++ GHVD +E PL+S SLG C++L+GG ++ P+PL SGD +VM AR A+HGVP ILE + PD L + DD + +M Y+ ++R+N N+RQV+ Sbjct: 253 DPIPIPHAISDLMKAVATATEDIGCQEAEVPWKNQYKGA-----DFKPEAGIINFYQLQSTLMGHVDQSEINMEAPLISMSLGHACIYLIGGNTRDTKPIPLKLNSGDMIVMTAIARRAYHGVPRILENTL-PDYMLPE--------NVDD-----EDWKMYGEYMKTTRINLNIRQVF 412
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|1026273414|gb|OAD06421.1| (hypothetical protein MUCCIDRAFT_106998 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 123.635 bits (309), Expect = 2.340e-27 Identity = 68/182 (37.36%), Postives = 99/182 (54.40%), Query Frame = 0 Query: 284 PVPQALTDLAREVL---EDIAHAESHRPCASKGERAFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVWRRELCE 462 P P + DL + V+ E+I H + KGE +F EAG++NYY ++ GHVD +E PLVS SLG C++L+GG ++ PVPL+ RSGD +VM G R AFHGVP I+E + PD L +D A + ++ ++++SR+N N+RQV+ R E Sbjct: 263 PFPADVADLTKAVVTAVENIGHGDWIN--QYKGE-------DFNAEAGVINYYQYRDTLMGHVDRSEMNMEAPLVSLSLGQSCIYLIGGLTRDTVPVPLLLRSGDIVVMTGPCRKAFHGVPLIMENTL-PD-----------YLSNNDQYEDAPDWKLFGDFMSTSRINLNIRQVYPRHQSE 423
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|669027131|emb|CDM80371.1| (unnamed protein product [Triticum aestivum]) HSP 1 Score: 122.094 bits (305), Expect = 3.127e-27 Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 316 AFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 A P F EA IVNYY P +GGHVDD E + P+VS SLG C+FLLGGK ++ AP P+ RSGD ++MAGEAR FHGVP I E D + + + L +DD R + Y+ +SR+N N+RQV+ Sbjct: 237 AMPFGEEFAAEAAIVNYYGPSDMLGGHVDDMEADWTKPIVSISLGCKCIFLLGGKTRDEAPTPMFLRSGDIVLMAGEARERFHGVPRIFTEGDQQD-----ISGLVSELSDDDD-------RFILDYIHNSRININIRQVY 365
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|1149846606|ref|XP_020186739.1| (alpha-ketoglutarate-dependent dioxygenase alkB isoform X2 [Aegilops tauschii subsp. tauschii] >gi|475560567|gb|EMT13580.1| hypothetical protein F775_06677 [Aegilops tauschii]) HSP 1 Score: 122.094 bits (305), Expect = 4.026e-27 Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 316 AFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 A P F EA IVNYY P +GGHVDD E + P+VS SLG C+FLLGGK ++ AP P+ RSGD ++MAGEAR FHGVP I E D + + + L +DD R + Y+ +SR+N N+RQV+ Sbjct: 242 AMPSGEEFTAEAAIVNYYGPSDMLGGHVDDMEADWTKPIVSISLGCKCIFLLGGKTRDEAPTPMFLRSGDIVLMAGEARERFHGVPRIFTEGDQQD-----ISGLVSELSDDDD-------RFILDYIHNSRININIRQVY 370
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|108864398|gb|ABA93798.2| (Alkylated DNA repair protein alkB, putative, expressed [Oryza sativa Japonica Group] >gi|215692905|dbj|BAG88325.1| unnamed protein product [Oryza sativa Japonica Group]) HSP 1 Score: 115.161 bits (287), Expect = 4.121e-27 Identity = 62/141 (43.97%), Postives = 84/141 (59.57%), Query Frame = 0 Query: 316 AFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 A P F+ EA IVNYY P +GGHVDD E S P+VS SLG C+FLLGGK ++ P + RSGD ++MAGEAR FHGVP I G D A ++A++ + A + + +Y+ +SR+N N+RQV+ Sbjct: 5 AMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWSKPIVSISLGCKCIFLLGGKTRDEVPTAMFLRSGDIVLMAGEARECFHGVPRIF---TGSDQA-----EISALVPQ----LSAEDDSFILNYIQNSRININIRQVY 133
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|1149846604|ref|XP_020186733.1| (alpha-ketoglutarate-dependent dioxygenase alkB isoform X1 [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 122.094 bits (305), Expect = 4.331e-27 Identity = 64/141 (45.39%), Postives = 83/141 (58.87%), Query Frame = 0 Query: 316 AFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPDPALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 A P F EA IVNYY P +GGHVDD E + P+VS SLG C+FLLGGK ++ AP P+ RSGD ++MAGEAR FHGVP I E D + + + L +DD R + Y+ +SR+N N+RQV+ Sbjct: 244 AMPSGEEFTAEAAIVNYYGPSDMLGGHVDDMEADWTKPIVSISLGCKCIFLLGGKTRDEAPTPMFLRSGDIVLMAGEARERFHGVPRIFTEGDQQD-----ISGLVSELSDDDD-------RFILDYIHNSRININIRQVY 372
BLAST of EWM26266.1 vs. NCBI_GenBank
Match: gi|223972739|gb|ACN30557.1| (unknown [Zea mays]) HSP 1 Score: 114.775 bits (286), Expect = 6.071e-27 Identity = 63/142 (44.37%), Postives = 83/142 (58.45%), Query Frame = 0 Query: 316 AFPLPMNFRGEAGIVNYYPPESSMGGHVDDAEGATSVPLVSFSLGLGCVFLLGGKDKEVAPVPLVFRSGDCMVMAGEARLAFHGVPCILEESAGPD-PALGQWTRVAAVLREDDGASRAAEARMLSHYLTSSRLNFNVRQVW 456 A P F+ EA IVNYY P +GGHVDD E + P+VS SLG C+FLLGGK ++ P + RSGD ++MAGEAR FHGVP I ES + PAL ++ + DD + Y+ +SR+N N+RQV+ Sbjct: 5 AMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWTKPIVSISLGCKCIFLLGGKTRDEVPTAMFLRSGDIVLMAGEARERFHGVPRIFTESDQQEIPAL-----ISQLSSGDD--------VFILEYIKNSRININIRQVY 133 The following BLAST results are available for this feature:
BLAST of EWM26266.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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