rna4279, rna4279 (mRNA) Nannochloropsis gaditana

Overview
Namerna4279
Unique Namerna4279
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1261
Alignment locationCM002463.1:165467..166371 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101553g2.4687.mrna
Orig protein idgnl|cribi|Naga_101553g2.4687
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:165467..166371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101553g2gene4123Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4279rna4279-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26404.1cds4269Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4279 ID=rna4279|Name=rna4279|organism=Nannochloropsis gaditana|type=mRNA|length=1261bp
TGGTGTCTCTGCAGGCGGTGTAGTGATGACGTTCTTGGCGTGGCAAGTCT
TTTTGCCTCCTGGTGGCCATGGCAAAGAAGTCAACAAGCGACGGCGGGCA
CGCGTCGGGACAAAAACTGGCGCCTTACATCATTAAACCCCACCATGTCC
TCCCCAAAGCTCCTTGCCGGACGCGAGGGTCATTGCCGCGAAGTGGAGTA
CGTGAGATACGTGCCAGCATCGTCCGTAGGGAAGGAGCGTGTTTGTTTTC
CCCTGAGCCCCCTCTTTGTCGCGTGGAAGAAGACGAGGCATAGTTGTACT
TGCCCCTGAAACGCACAAACCCGAGGTAGTCTCTTTTATATCCCATGCAA
ATGTGACGCCCAGGCACCTGGACACGAGCCCAAGACTTCCATACCATGCG
TGCACTCCTCTCAATCTCTTGTTGTTGGGCTGCAGGGTCCAATGGATTCT
CACCCCCCTTCTTTTCCGCCTCTCGGCCACGCATCAGACATGACCATGCC
GACAAATCGCGACCACATCTATCATGCAGAGCCGCACCAGCTTGGGCAAA
GGAGACGTCGCCGTCATCCAGCTTCGTCACATATCATGCTGGCCGCTTCA
GCCACGGCTGCCTTGTTCAGTTTCCAGTGCGCACCCTGGACGTCCCCCTC
CTCTGTGCCCTATACCCGCCTGCCTTTCGTCGCGTCAGCCGCGGCGTTGC
CGGCCTCCATTGATAGCCAAACCCCTGGCCCCGTGGCACCGTCATTTCTC
CGTCGGTTGAATGTGAAGGGAGGAAGCAAGGGTCCTGCGGACGTGCTGGG
CACGCGGGGGAGGCAAGCGGGCGGGGGGGAGGGAGGGAGGGAGGGCGGGC
CCGGGGGAGGGAGGGAGGAATCGGCCCAAGAGAAGGCGACAAAGACCCCA
TGCCTGCCACGCCGGGTGAGGGGTGGGATGACGCGGTTGACCCTGGCGGG
GATGGGGAGGGAAGACGTGGAGGAAGCGACAGACAGGGAGGATGTGCGGG
GAGCGGAGGTGCAGGCCACAGGGAAAGAGACCCATTCTACGGATGCGCCC
GCCTCGACATCCGGAGACGAAGAAAGACGCCTGGAGGGGGACGGGTGGGT
GGAGCCGATATGTCGCGAGGATCCTGCCCGCTTTGTTCTCTTCCCCATTC
GGCATCCGGAGCTATGGGAAATGTACAAACGCCATGAAGCCAGCTTTTGG
ACGGCGGAGGAGGTGGACTTGAGTCAGGACATGGAGGACTGGCGGGTGGG
GAGGGAGGGAG
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protein sequence of rna4279

>rna4279-protein ID=rna4279-protein|Name=rna4279|organism=Nannochloropsis gaditana|type=polypeptide|length=141bp
LPTSLPPSLASGGLPYPPTDESLGARGGAHLSLWDRSLRLDGGGDFGGKN
GQKGGDGEPAGGGPADRVAGERQSCVYDRSGRACVRRYNEDPGEIRGKEG
GREGGREGGKAESRASLWLRFRRHWRCPVKDLPLSLILFRL
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mRNA from alignment at CM002463.1:165467..166371-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4279 ID=rna4279|Name=rna4279|organism=Nannochloropsis gaditana|type=mRNA|length=905bp|location=Sequence derived from alignment at CM002463.1:165467..166371- (Nannochloropsis gaditana)
CTCCCTACCTCCCTCCCTCCCTCCCTCGCGTCAGGTGGTCTCCCCTACCC
TCCTACGGATGAAAGTCTGGGAGCGCGGGGCGGGGCCCACCTTAGCTTGT
GGGACAGGAGCCTGCGCCTTGACGGTGGCGGCGATTTTGGCGGGAAAAAC
GGACAAAAGGTGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGCATGGCG
ATCGCCTCGGTCAGGAGGGTGTAGGAGAACACATTCACCTTTTCACAGCT
TTCTGCCTGCTTACATTCTCTCTCTCTTCCTGGGGGGTAGGGAGGTGACG
GTGAGCCTGCCGGGGGGGGACCTGCAGATCGAGTGGCGGGAGAGCGACAA
TCATGTGTATATGACAGGTGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGGTAGGACGACGCGCGTCTAGTGGGGGGGACCTTGAGGACCCTGAGATG
GTCTCGGCATCCACACGTGCGTCCTCTCAACCCTCCCTCCACTCCCCCTC
CTCTCTTCGTATTGCCTTCGCAGGAGCGGCAGAGCTTGTGTACGGCGGTA
CAATGAAGACCCTGGGGAGATAAGGGGGAAGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAAGGCAGAGTCTAGAGCCTCACTCTGGCTGCGTTTT
CGTCGGCACTGGAGATGCCCTGTGAAGGATCTTCCCCTCTCTTTGATCCT
CTTTCGCCTCTAAAGTGTTGTTAGCGCTAGCATGGCTTGGGAGAAAGACG
GAAAGAAAAGGAGGGAAAGAGGGAAGGAGGGTGGGAGGGAGGAAGGGGAG
GGAGGGGGAACGAGCCGATAAATTGATACAAGGGATGGGACGACGACATA
AAGGGACGGCCAAACTCGCAAAAAAAGAAGAAAAAAAGAAAATCAAGGGT
CCTGC
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Coding sequence (CDS) from alignment at CM002463.1:165467..166371-

>rna4279 ID=rna4279|Name=rna4279|organism=Nannochloropsis gaditana|type=CDS|length=1278bp|location=Sequence derived from alignment at CM002463.1:165467..166371- (Nannochloropsis gaditana)
GAGCGGCAGAGCTTGTGTACGGCGGTACAATGAAGACCCTGGGGAGATAA
GGGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGCAGAG
TCTAGAGCCTCACTCTGGCTGCGTTTTCGTCGGCACTGGAGATGCCCTGT
GAAGGATCTTCCCCTCTCTTTGATCCTCTTTCGCCTCTAAGGAGGTGACG
GTGAGCCTGCCGGGGGGGGACCTGCAGATCGAGTGGCGGGAGAGCGACAA
TCATGTGTATATGACAGCTCCCTACCTCCCTCCCTCCCTCCCTCGCGTCA
GGTGGTCTCCCCTACCCTCCTACGGATGAAAGTCTGGGAGCGCGGGGCGG
GGCCCACCTTAGCTTGTGGGACAGGAGCCTGCGCCTTGACGGTGGCGGCG
ATTTTGGCGGGAAAAACGGACAAAAGGAGCGGCAGAGCTTGTGTACGGCG
GTACAATGAAGACCCTGGGGAGATAAGGGGGAAGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAAGGCAGAGTCTAGAGCCTCACTCTGGCTGCGT
TTTCGTCGGCACTGGAGATGCCCTGTGAAGGATCTTCCCCTCTCTTTGAT
CCTCTTTCGCCTCTAAGGAGGTGACGGTGAGCCTGCCGGGGGGGGACCTG
CAGATCGAGTGGCGGGAGAGCGACAATCATGTGTATATGACAGCTCCCTA
CCTCCCTCCCTCCCTCCCTCGCGTCAGGTGGTCTCCCCTACCCTCCTACG
GATGAAAGTCTGGGAGCGCGGGGCGGGGCCCACCTTAGCTTGTGGGACAG
GAGCCTGCGCCTTGACGGTGGCGGCGATTTTGGCGGGAAAAACGGACAAA
AGGAGCGGCAGAGCTTGTGTACGGCGGTACAATGAAGACCCTGGGGAGAT
AAGGGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGCAG
AGTCTAGAGCCTCACTCTGGCTGCGTTTTCGTCGGCACTGGAGATGCCCT
GTGAAGGATCTTCCCCTCTCTTTGATCCTCTTTCGCCTCTAAGGAGGTGA
CGGTGAGCCTGCCGGGGGGGGACCTGCAGATCGAGTGGCGGGAGAGCGAC
AATCATGTGTATATGACAGCTCCCTACCTCCCTCCCTCCCTCCCTCGCGT
CAGGTGGTCTCCCCTACCCTCCTACGGATGAAAGTCTGGGAGCGCGGGGC
GGGGCCCACCTTAGCTTGTGGGACAGGAGCCTGCGCCTTGACGGTGGCGG
CGATTTTGGCGGGAAAAACGGACAAAAG
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Synonyms
Publications