EWM26494.1, cds4180 (CDS) Nannochloropsis gaditana

Overview
NameEWM26494.1
Unique Namecds4180
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1065296..1065445 -
Alignment locationCM002462.1:1064833..1065138 -
Alignment locationCM002462.1:1064656..1064718 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26494.1
Productn-6 adenine-specific dna methyltransferase 1
Orig transcript idgnl|cribi|Naga_100646g2.4626.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1065296..1065445 -
CM002462.1supercontigCM002462.1:1064833..1065138 -
CM002462.1supercontigCM002462.1:1064656..1064718 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016049cell growth
GO:0016043cellular component organization
GO:0006412translation
GO:0006259DNA metabolic process
GO:0042221response to chemical
GO:0006464cellular protein modification process
GO:0019748secondary metabolic process
GO:0032259methylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
GO:0008168methyltransferase activity
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Vocabulary: INTERPRO
TermDefinition
IPR002052DNA_methylase_N6_adenine_CS
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|585108548|gb|EWM26494.1| (n-6 adenine-specific dna methyltransferase 1 [Nannochloropsis gaditana])

HSP 1 Score: 350.132 bits (897), Expect = 4.705e-122
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query:    1 MLRSGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
            MLRSGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA
Sbjct:    1 MLRSGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|553188189|ref|XP_005854751.1| (n -adenine-specific dna methyltransferase 1, partial [Nannochloropsis gaditana CCMP526] >gi|422294311|gb|EKU21611.1| n -adenine-specific dna methyltransferase 1, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 327.791 bits (839), Expect = 1.825e-112
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEV 163
            SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEV
Sbjct:   62 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEV 221          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|617627517|ref|XP_007528610.1| (PREDICTED: hemK methyltransferase family member 2 isoform X1 [Erinaceus europaeus])

HSP 1 Score: 159.844 bits (403), Expect = 2.455e-46
Identity = 87/166 (52.41%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRF 169
            SGSG V+A LA      +GP+   L++ TDIN  A   T  TG  N +L H ++  DL+  LLPRL   VDLLVFNPPYV TP  EV SHGIEA+WAGG++GREV+DR    +P LL P+G   YLV + EN PE+I   M+ E LQ  +V SR+A  EVL VL+F
Sbjct:   54 SGSGVVSAFLA----SVIGPQ--ALYMCTDINPEAAACTLETGRCNKVLIHPVI-TDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVRSHGIEAAWAGGRNGREVMDRFFPLVPILLSPEGS-FYLVTIKENNPEEILKTMKAEGLQGTIVLSRQAGREVLSVLKF 211          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|521023159|gb|EPQ04947.1| (HemK methyltransferase family member 2, partial [Myotis brandtii])

HSP 1 Score: 155.992 bits (393), Expect = 3.140e-45
Identity = 84/169 (49.70%), Postives = 107/169 (63.31%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
            SGSG V+  LA      +GP+   L++ TDIN +A   T  T   N +  H ++  DL+  LLPRL   VDLLVFNPPYV TP  EVGSHGIEA+WAGG++GREV+DR    +P+LL P+ G  YLV + EN PEDI   M+   LQ  +  SR+A  E+L VLRF  +
Sbjct:    9 SGSGVVSTFLA----SMIGPQ--ALYMCTDINPKAAACTLETARCNRVHVHPVI-TDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPR-GLFYLVTIKENNPEDILETMKVRGLQGTIALSRRAGQEILSVLRFTKS 169          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|1123942877|ref|XP_019585433.1| (PREDICTED: hemK methyltransferase family member 2 isoform X1 [Rhinolophus sinicus])

HSP 1 Score: 156.377 bits (394), Expect = 5.584e-45
Identity = 86/169 (50.89%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
            SGSG V+A LA      +GP+   L+I TDIN +A   T  T   N + H E +  DL+  LLPRL   VDLLVFNPPYV TP  EVGSHGIEA+WAGG+ GREV+DR    +P+LL  Q G  YLV + EN PE+I   M+ E L    V SR+A  E+L VL+F  +
Sbjct:   59 SGSGVVSAFLA----SMIGPQ--ALYICTDINPKAAACTLETARCNKV-HIEPIVTDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVGSHGIEAAWAGGRKGREVMDRFFPLVPDLLS-QRGVFYLVTIKENNPEEILKTMKMEGLHGTTVLSRQAGQEILSVLKFTKS 219          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|641735977|ref|XP_008158580.1| (PREDICTED: hemK methyltransferase family member 2 [Eptesicus fuscus])

HSP 1 Score: 155.606 bits (392), Expect = 1.415e-44
Identity = 86/169 (50.89%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
            SGSG V+A LA      +GP    L++ TDIN  A   T  T   N + H + +  DL+  LLPRL   VDLLVFNPPYV TP  EVGSHGIEA+WAGG++GREV+DR    +P+LL P+ G  YLV + EN PEDI   M+ + LQ     SR+A  EVL VLRF  +
Sbjct:   54 SGSGVVSAFLA----SMIGPR--ALYVCTDINPNAAACTLETARCNKV-HVQPVITDLVKGLLPRLKEKVDLLVFNPPYVVTPPEEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPR-GVFYLVTIKENNPEDILETMKVKGLQGTTALSRRAGQEVLSVLRFTKS 214          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|672826496|gb|KFH71386.1| (methylase [Mortierella verticillata NRRL 6337])

HSP 1 Score: 155.221 bits (391), Expect = 1.716e-44
Identity = 80/167 (47.90%), Postives = 109/167 (65.27%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFI 170
            SGSGCVTA + + L    G  +C L + TDINS+A RATQ T   N  L  +I++  L   +LPRL   +DL+ FNPPYV TP+ EVGSH +EA+WAGG DGREV+D  +  I  LL P+ G  Y+V VNEN P+DI   M+ +  ++ +V++R A  E L +L+F+
Sbjct:   52 SGSGCVTAFVGKIL----GESNC-LKLCTDINSKAARATQGTAKQNQ-LSVDIIETHLTNGILPRLSGKIDLVYFNPPYVLTPSEEVGSHSVEAAWAGGIDGREVIDEFMPYIKQLLSPK-GVFYMVVVNENKPDDIREIMKRDGFESSIVKTRLAGREKLFILKFV 211          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|1190403062|ref|XP_020851694.1| (hemK methyltransferase family member 2 isoform X1 [Phascolarctos cinereus])

HSP 1 Score: 155.221 bits (391), Expect = 1.878e-44
Identity = 82/166 (49.40%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRF 169
            SGSG V+A LA  +    GP+   L++ TDIN +A   T  T   N + H + +  DL   LLPRL   VDLLVFNPPYV TP+ EVGSHGIEA+WAGG++GREV+DR    + +LL P+ G  YLV + EN P++I   M++  LQ ++V SR+A  E+L VL+F
Sbjct:   59 SGSGIVSAFLASII----GPQ--ALYMCTDINPKAADCTLETALCNKV-HIQPIITDLAKGLLPRLFKKVDLLVFNPPYVVTPSEEVGSHGIEAAWAGGRNGREVMDRFFPLVADLLSPE-GFFYLVTIKENNPDEIMETMKKYGLQGKIVLSRQAGQEILSVLKF 216          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|7717305|emb|CAB90428.1| (PRED28 [Homo sapiens])

HSP 1 Score: 154.836 bits (390), Expect = 2.438e-44
Identity = 84/169 (49.70%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
            SGSG V+A LA      +GP+   L++ TDIN  A   T  T   N + H + +  DL+  LLPRL   VDLLVFNPPYV TP  EVGSHGIEA+WAGGK+GREV+DR    +P+LL P+ G  YLV + EN PE+I   M+ + LQ     SR+A  E L VL+F  +
Sbjct:   54 SGSGVVSAFLA----SMIGPQ--ALYMCTDINPEAAACTLETARCNKV-HIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPK-GLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214          
BLAST of EWM26494.1 vs. NCBI_GenBank
Match: gi|313104228|sp|Q9Y5N5.3|HEMK2_HUMAN (RecName: Full=HemK methyltransferase family member 2; AltName: Full=M.HsaHemK2P; AltName: Full=N(6)-adenine-specific DNA methyltransferase 1)

HSP 1 Score: 154.836 bits (390), Expect = 2.438e-44
Identity = 84/169 (49.70%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    4 SGSGCVTAVLARTLRDALGPEHCTLFISTDINSRAVRATQATGSANSILHHEILQADLLAPLLPRLLHSVDLLVFNPPYVPTPTSEVGSHGIEASWAGGKDGREVLDRILDSIPNLLRPQGGCMYLVAVNENLPEDICARMREENLQAEVVRSRKARNEVLHVLRFIHA 172
            SGSG V+A LA      +GP+   L++ TDIN  A   T  T   N + H + +  DL+  LLPRL   VDLLVFNPPYV TP  EVGSHGIEA+WAGGK+GREV+DR    +P+LL P+ G  YLV + EN PE+I   M+ + LQ     SR+A  E L VL+F  +
Sbjct:   54 SGSGVVSAFLA----SMIGPQ--ALYMCTDINPEAAACTLETARCNKV-HIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTPPQEVGSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPK-GLFYLVTIKENNPEEILKIMKTKGLQGTTALSRQAGQETLSVLKFTKS 214          
The following BLAST results are available for this feature:
BLAST of EWM26494.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108548|gb|EWM26494.1|4.705e-122100.00n-6 adenine-specific dna methyltransferase 1 [Nann... [more]
gi|553188189|ref|XP_005854751.1|1.825e-112100.00n -adenine-specific dna methyltransferase 1, parti... [more]
gi|617627517|ref|XP_007528610.1|2.455e-4652.41PREDICTED: hemK methyltransferase family member 2 ... [more]
gi|521023159|gb|EPQ04947.1|3.140e-4549.70HemK methyltransferase family member 2, partial [M... [more]
gi|1123942877|ref|XP_019585433.1|5.584e-4550.89PREDICTED: hemK methyltransferase family member 2 ... [more]
gi|641735977|ref|XP_008158580.1|1.415e-4450.89PREDICTED: hemK methyltransferase family member 2 ... [more]
gi|672826496|gb|KFH71386.1|1.716e-4447.90methylase [Mortierella verticillata NRRL 6337][more]
gi|1190403062|ref|XP_020851694.1|1.878e-4449.40hemK methyltransferase family member 2 isoform X1 ... [more]
gi|7717305|emb|CAB90428.1|2.438e-4449.70PRED28 [Homo sapiens][more]
gi|313104228|sp|Q9Y5N5.3|HEMK2_HUMAN2.438e-4449.70RecName: Full=HemK methyltransferase family member... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4190rna4190Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications