EWM26567.1, cds4121 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|585108652|gb|EWM26567.1| (hypothetical protein Naga_100084g6 [Nannochloropsis gaditana]) HSP 1 Score: 282.337 bits (721), Expect = 2.954e-96 Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 Query: 1 MGEDVKVPLVVKKEEKDGTEVIHLRNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLMEGGMEGVGSTAFA 139 MGEDVKVPLVVKKEEKDGTEVIHLRNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLMEGGMEGVGSTAFA Sbjct: 1 MGEDVKVPLVVKKEEKDGTEVIHLRNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLMEGGMEGVGSTAFA 139
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|219122320|ref|XP_002181495.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406771|gb|EEC46709.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 86.2705 bits (212), Expect = 2.622e-19 Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 0 Query: 27 PGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLK---GSGVSSPSPVKKAATVKKAGGEGRKR---KSRLEDDVVVKTGLMEGGMEGVGSTAF 138 PGQK+PTPTPG +R+FYETL +Q P+S MAQE+C+ YG+L +EA ++K+V RK + G G ++ SP +K + + +KR + R E D+ V G +G+G+ Sbjct: 7 PGQKFPTPTPGFGDRVFYETLLRQRPDSIMAQEWCVSYGVLPHDEAERLHKKVTDRKRQMRLGGGSAATSPARKTSV------KAKKRVIKEERFEPDLQVSGG------DGIGTAVL 112
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|673032186|ref|XP_008870054.1| (hypothetical protein H310_06685 [Aphanomyces invadans] >gi|574474054|gb|ETW01056.1| hypothetical protein H310_06685 [Aphanomyces invadans]) HSP 1 Score: 86.2705 bits (212), Expect = 3.050e-19 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 0 Query: 25 RNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGL-MEGGMEGVG 134 R PGQK+PTP+PG +R+FYE+L QNP S MA+++C+ YG+LD ++A ++ K++ G SS KKA KK RK K+ L DD V TGL EGVG Sbjct: 14 RKPGQKHPTPSPGFADRVFYESLLSQNPKSKMAKKWCLEYGVLDWDDAAALCKEL------GVSFSSKGGAKKAVDPKK-----RKSKNIL-DDTVDDTGLHASSNYEGVG 112
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|1210513619|dbj|GAX27491.1| (hypothetical protein FisN_23Hh043 [Fistulifera solaris]) HSP 1 Score: 85.1149 bits (209), Expect = 7.471e-19 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 0 Query: 27 PGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLK 85 PGQK+PTPTPG +R+FYETL QQ P+SFMAQE+C+ YG+L E A + +QVQ RK + Sbjct: 10 PGQKFPTPTPGFGDRVFYETLLQQRPDSFMAQEWCVNYGVLSYERAEELCRQVQERKRR 68
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|1210514558|dbj|GAX26515.1| (hypothetical protein FisN_23Lh043 [Fistulifera solaris]) HSP 1 Score: 84.7297 bits (208), Expect = 9.905e-19 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 0 Query: 27 PGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLK 85 PGQK+PTPTPG +R+FYETL QQ P+SFMAQE+C+ YG+L E A + +QVQ RK + Sbjct: 10 PGQKFPTPTPGFGDRVFYETLLQQRPDSFMAQEWCVNYGVLSYERAEELCRQVQERKRR 68
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|224013602|ref|XP_002296465.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968817|gb|EED87161.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.8037 bits (203), Expect = 7.369e-18 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 0 Query: 28 GQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLMEGGMEGVG 134 GQK+PTPTPG +R+FYETL +Q P+S MAQE+C+ YG+L EEEA K V RK G S + K AG + +K+ ++ DDV G+ GG +G+G Sbjct: 12 GQKFPTPTPGNGDRVFYETLLRQRPDSEMAQEWCVNYGVLSEEEAAKAYKAVVKRK----GSKKASSTSPTPSSKSAGTKKKKKVKKVLDDVAYDAGMDAGGDQGIG 114
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|698779477|ref|XP_009822782.1| (hypothetical protein H257_01326 [Aphanomyces astaci] >gi|574122443|gb|ETV87919.1| hypothetical protein H257_01326 [Aphanomyces astaci]) HSP 1 Score: 80.8777 bits (198), Expect = 4.500e-17 Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 0 Query: 25 RNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLM-EGGMEGVG 134 R PGQK+PTP+PG +R+FYE+L QNP S MA+++C+ YG+L+ ++A + K++ G SS KK++ KK ++ + + DD V TGL EG+G Sbjct: 14 RKPGQKHPTPSPGFADRVFYESLLSQNPKSKMAKKWCLEYGVLEWDDAAVLCKEL------GVSYSSKGAAKKSSEPKK------RKANNILDDTVDDTGLHASSNYEGIG 112
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|953501959|emb|CEG36890.1| (hypothetical protein PHALS_04143 [Plasmopara halstedii]) HSP 1 Score: 80.1073 bits (196), Expect = 1.150e-16 Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 0 Query: 25 RNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLMEGGMEGVGSTAF 138 R PGQK+PTP+PG +R+FYE+L QQ P+S MAQ++C+ YG+L EA + K + + V+ P+ V K +K+ R++ E + + G EG+G +A Sbjct: 15 RKPGQKHPTPSPGFADRVFYESLLQQRPDSRMAQKWCLEYGVLKWAEAEMLCKTLGL----SANVTHPTKVSKIKK-QKSSASSAVRRALDESEAAASMEITNGSYEGIGLSAL 123
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|695437338|ref|XP_009532192.1| (hypothetical protein PHYSODRAFT_317246 [Phytophthora sojae] >gi|348672039|gb|EGZ11859.1| hypothetical protein PHYSODRAFT_317246 [Phytophthora sojae]) HSP 1 Score: 79.337 bits (194), Expect = 1.791e-16 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = 0 Query: 25 RNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGL--MEGGMEGVGSTAF 138 R PGQK+PTP+PG +R+FYE+L QQ P+S MAQ++C+ YG+L EA ++ K++ G ++ P K+ +KK R SR++D+ + G EGVG A Sbjct: 15 RKPGQKHPTPSPGFADRVFYESLLQQRPDSRMAQKWCLEYGVLKWAEAEALCKKL------GVSINVTRPA-KSPKLKKQQKSAGGRASRVQDESAAAEAMEISGAGFEGVGLGAL 123
BLAST of EWM26567.1 vs. NCBI_GenBank
Match: gi|669164800|ref|XP_008617962.1| (hypothetical protein SDRG_13643 [Saprolegnia diclina VS20] >gi|530730323|gb|EQC28565.1| hypothetical protein SDRG_13643 [Saprolegnia diclina VS20]) HSP 1 Score: 78.1814 bits (191), Expect = 4.397e-16 Identity = 50/122 (40.98%), Postives = 72/122 (59.02%), Query Frame = 0 Query: 14 EEKDGTEVIHLRNPGQKYPTPTPGVPERIFYETLYQQNPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAATVKKAGGEGRKRKSRLEDDVVVKTGLMEGG-MEGVG 134 EE+ E+ R PGQK+PTP+PG +R+FYE+L +QNP S MA+++CI YG+L+ +EA ++ K + G++ +P K A K+KS + DD V GL G MEGVG Sbjct: 3 EEEWSKELEANRKPGQKHPTPSPGFADRVFYESLLRQNPESKMAKKWCIEYGVLEADEAAALCKAM--------GIAFKAP--KELKKTSAKSSSSKKKSNVLDDAVDDIGLHAGSHMEGVG 114 The following BLAST results are available for this feature:
BLAST of EWM26567.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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