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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100084g6.1575.mrna |
| Orig protein id | gnl|cribi|Naga_100084g6.1575 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:944602..945265 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4131 ID=rna4131|Name=rna4131|organism=Nannochloropsis gaditana|type=mRNA|length=2243bp
AAAGACTAGGAATACACGGCCACAGTGCACAACATGACACCGTCGCTTCT
TTTTTCTATACGTCATGCCAGGAACATCGACGCGCAGGCAGAATTTTGAT
ACCGGTGCCGGTAAAGAAGGCGGCATGGGAGGCTCTTTCACTTGGGGAAG
TACAGACCAAGTACTCCGCCCACGCACTCGTCTAAGAACAAATGGGAGGT
TCTACGTCTTCGTGCTTCTTCTCCTTACTTCAGCACATGCATTTCTTCCA
AGAACGCCCAAACTCACCGCGACAAGGTACTTGCAGGCCAGCACTCCTGT
CTCCTCTAAGCCCTCGTCCTCAACCACGCCAGTTGCTACCGACGCGGCTC
AATATTGGCCTTTGCTAGAGGAGCTGGTCTCCTCATGTCTGGTGGACGAC
AAGGCGTTTTCTCCGACCGGAAGTGACGCGTCCCCATATGTGAGACCACG
GCAACGCGATGTAGGCGCCAGCGGGGAAGGGATGGTGGCCATTGGGGCGT
CACTTGCGGACACGCGCCTGGTAGATGGCCTGGAGCTGATGAAGGTCCGT
CGGAACAAGGACGGAAGTGTCCGCTCCGGCTTCCTCCGTTTTTGGAACTC
GGTGCCGTTGGAATTTTTTGGGGTCTCCCGGAACGACTTGCGGGTCTATG
CGCGGATGCGGGAACGCGTTGAAAAAGCCTTGGGTTTCACCGCATCCCCG
GCCGTGGAGCGGGTGGAAAGTGGCATTGCCATTGTCATGGCCCTGTCGAT
TACCTCGGCATTGACCACGCTCGACAAACTTCCAGGGCCCGACATCGTCC
GCTGGTTCGCCACCTCCTTTCTAGTCTCAATCCCCTTTGCCTACATCTCC
CTTGGCCTCTCCTTCCCCGAGGTCCTGATGCGCGCGGCCAACCAGGTCCT
GTTCGCTTTGAACAGGGAGTACAAAGAACGACTCCTCCGCCACGAAGCCG
GCCATTTCCTCGTGGGCTACCTGTGCGGTCTCCCTGTCCTGAGCTATTCT
GTGTCGGGGCGGCTCAATGCGGTGGAATTTGCCCAAATCCTCTCCTTCGC
CCAGGAAGCAGCTGCCGCCGCGACCGTGCCCCAGGACTCGTCCGAGACCG
GGCCAGCGATGTTGCCTTCTAAATCGGGCCCCGTGTCTCGAGAAGAAGCA
GAGCGATGGACCCCCCGGGGCGTCCTTTTAAAGGAGGAGCTGGCCCGACT
CACGGTGGTCTCCTTGGCAGGCGTCGTGAGTGAGTACATTGCCTACGGGA
AGGCTGAGGGCGGGGGGAACGACTTGAGCCAGCTCCTGGCCTTGTTCAAT
TTGGCGGATCCGGCCATGAGCGACCGAGAGCAGGAGCGATGGTTGAATTG
GGGTGTGCTTCAGTCGTACAACATGATCCGGCAGAACGAAAAGGCGCTGG
TGGCACTCATGGCTGCTTTTGAGCGGGGAGAGAGCGTGGTTACCTGCATG
CAGATCGTCGAGCAAGAGGGAGGGCGATACTTGGAGGATGACTGAGTAGC
AGGCAGAAGGTTTGCTGATGGAAGCGATCGCCGAAGAAGGGGAGTCCGGA
TATCGCCGAGAAATGTCGAGACCTTGGGGCCCCTTGAGAAGAGAGCAAGA
CACAGAGATGCCTGTACGGTCTGGATCCGAGCCCCCAGCGTCAGCGTTGC
TCTCAACAGCGAGGTGCATATCTCTTACCAAGAGCATCTCTTGGTAAAGT
ACAGGGCGGTCGCTGCGTACGGCCTTGGCCGAATTTTGAGGGTCCTGTAT
GCTGGCGACGGCTCCATGTCAAGCTCCGGAGGGACCCGAGGGACGGCCTC
TCTGGTTTAAGCTAGCGCTGATTAGGATGCTAAAGATCCGAGCATGTCGG
GGGGAGTGCCCTGTACGAAAGCATTCGGAGCACGAGGGGTAGCAAGACGG
GTCCTTCCTGGGCCTGCCCGAAAGCCCCGGCAGCATCGGGAATACAGACC
GATGGGTGGCAAGCCTGTCCATGCGCAGGATAAGAGAATGATCAACGCCA
GGTTTACCACACATCTGGCGCGCGATGCAAAGGCCATGGCCAGCGTGTGG
CGAGAAAAGAGCCGCGGGTCGCGGGCCGTGGGGCCATGGGGCTGGGCAGA
TGGAGGGGAGGGTGCGTCCGGTGTAGTCTAAATCGGATGGAGGCATGAAA
GGGGAAGAAGAAGGAGAGAGAGCAACAAAAGCGACGTGCAAGTGGAAGGA
GCCTCTGCGGAAAAAAACCGTCGTCAAGTCTTTTGGTTTCCTT back to topprotein sequence of rna4131 >rna4131-protein ID=rna4131-protein|Name=rna4131|organism=Nannochloropsis gaditana|type=polypeptide|length=139bp
MGEDVKVPLVVKKEEKDGTEVIHLRNPGQKYPTPTPGVPERIFYETLYQQ
NPNSFMAQEYCILYGILDEEEAISVNKQVQARKLKGSGVSSPSPVKKAAT
VKKAGGEGRKRKSRLEDDVVVKTGLMEGGMEGVGSTAFA back to topmRNA from alignment at CM002462.1:944602..945265+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4131 ID=rna4131|Name=rna4131|organism=Nannochloropsis gaditana|type=mRNA|length=664bp|location=Sequence derived from alignment at CM002462.1:944602..945265+ (Nannochloropsis gaditana)
ATGGGAGAAGACGTCAAAGTCCCGTTGGTggtcaagaaagaggagaagga
cggcaCCGAGGTCATACATTTAAGGAATCCGGGGCAAAAAtaccccaccc
ccacccccggcgTACCAGGTAGGCCTTCGCTTGTCTGTGCATTTACTTCT
CGGCTCGAGTGGCAAGTGCCGGTTGTTCCACAaccccatctccccctttc
tcacATCAGAACGCATCTTCTACGAGACCTTATACCAACAAAACCCGAAC
TCCTTCATGGCCCAGGAGTACTGCATTCTTTACGGTTCGTCGTCGGCTTC
CTGTGCCCCTTTTCTGACTTTAGGCCCTCACCATTACACCATTACGTATT
TTCGCCCGTCCAAGATCTCACCTGCCCGTCACACTGCCTCCCCGTATTAC
TTTCTTTCCGTCACGTGTCCTACCCTCTCCATCCCAGGCAtattggacga
ggaggaggcaatcTCAGTAAACAAACAGGTGCAAGCCCGTAAATTGAAGG
GCAGTGGGGTATCTTCTCCGTCCCCTGTGAAAAAGGCAGCGACAgtgaag
aaggcgggcggggaaggaaggaagagaaagagccggttggaggacgacgt
ggtcGTGAAGACGGGATTaatggaagggggaatggagggagtggggtCGA
CGGCCTTCGCATGA back to topCoding sequence (CDS) from alignment at CM002462.1:944602..945265+ >rna4131 ID=rna4131|Name=rna4131|organism=Nannochloropsis gaditana|type=CDS|length=1260bp|location=Sequence derived from alignment at CM002462.1:944602..945265+ (Nannochloropsis gaditana)
ATGGGAGAAGACGTCAAAGTCCCGTTGGTggtcaagaaagaggagaagga
cggcaCCGAGGTCATACATTTAAGGAATCCGGGGCAAAAAtaccccaccc
ccacccccggcgTACCAGAACGCATCTTCTACGAGACCTTATACCAACAA
AACCCGAACTCCTTCATGGCCCAGGAGTACTGCATTCTTTACGGCAtatt
ggacgaggaggaggcaatcTCAGTAAACAAACAGGTGCAAGCCCGTAAAT
TGAAGGGCAGTGGGGTATCTTCTCCGTCCCCTGTGAAAAAGGCAGCGACA
gtgaagaaggcgggcggggaaggaaggaagagaaagagccggttggagga
cgacgtggtcGTGAAGACGGGATTaatggaagggggaatggagggagtgg
ggtCGACGGCCTTCGCATGAATGGGAGAAGACGTCAAAGTCCCGTTGGTg
gtcaagaaagaggagaaggacggcaCCGAGGTCATACATTTAAGGAATCC
GGGGCAAAAAtaccccacccccacccccggcgTACCAGAACGCATCTTCT
ACGAGACCTTATACCAACAAAACCCGAACTCCTTCATGGCCCAGGAGTAC
TGCATTCTTTACGGCAtattggacgaggaggaggcaatcTCAGTAAACAA
ACAGGTGCAAGCCCGTAAATTGAAGGGCAGTGGGGTATCTTCTCCGTCCC
CTGTGAAAAAGGCAGCGACAgtgaagaaggcgggcggggaaggaaggaag
agaaagagccggttggaggacgacgtggtcGTGAAGACGGGATTaatgga
agggggaatggagggagtggggtCGACGGCCTTCGCATGAATGGGAGAAG
ACGTCAAAGTCCCGTTGGTggtcaagaaagaggagaaggacggcaCCGAG
GTCATACATTTAAGGAATCCGGGGCAAAAAtaccccacccccacccccgg
cgTACCAGAACGCATCTTCTACGAGACCTTATACCAACAAAACCCGAACT
CCTTCATGGCCCAGGAGTACTGCATTCTTTACGGCAtattggacgaggag
gaggcaatcTCAGTAAACAAACAGGTGCAAGCCCGTAAATTGAAGGGCAG
TGGGGTATCTTCTCCGTCCCCTGTGAAAAAGGCAGCGACAgtgaagaagg
cgggcggggaaggaaggaagagaaagagccggttggaggacgacgtggtc
GTGAAGACGGGATTaatggaagggggaatggagggagtggggtCGACGGC
CTTCGCATGA back to top
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