rna4123, rna4123 (mRNA) Nannochloropsis gaditana

Overview
Namerna4123
Unique Namerna4123
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length330
Alignment locationCM002462.1:918113..918374 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100084g16.1563.mrna
Orig protein idgnl|cribi|Naga_100084g16.1563
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:918113..918374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100084g16gene3968Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4123rna4123-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26555.1cds4113Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4123 ID=rna4123|Name=rna4123|organism=Nannochloropsis gaditana|type=mRNA|length=330bp
ATGCGAAAGACAGATTCCTTGAACCGTGAAAATACTCCCGATATTGGAAT
CCAGGGAAACGGAGGTTCTGCTAGACTAGTACAAAGCTGCGCGAGCCAAT
TTTTTGCTGTATTATACAGGTTTCGTCATCATCGCCCTCCCATGACCGTT
CAGATCTTCACAAAACATGTGTTCTACCGCTACCATTTTGGGGCAAGAGG
TTATCATCGGCAGAAATTCTATACAAAGAAGCTGCTCGACACATCTGCTG
TGATCTCATTCATCCATATTTTTATACTTGTGGGGGGCGCTGCAGAATTA
GATTGCCGATTTATATATGATAGGTGGTGA
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protein sequence of rna4123

>rna4123-protein ID=rna4123-protein|Name=rna4123|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MPASISPNPGTAGLFSSCKENSIAAAIVDVRLMICLGHMECQSSLAYIWG
DEQRWSVYAIEAILCDLNI
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mRNA from alignment at CM002462.1:918113..918374+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4123 ID=rna4123|Name=rna4123|organism=Nannochloropsis gaditana|type=mRNA|length=262bp|location=Sequence derived from alignment at CM002462.1:918113..918374+ (Nannochloropsis gaditana)
ATGCCAGCAAGCATTTCACCAAACCCTGGAACCGCAGGCCTCTTCTCTTC
ATGTAAAGAGTGAACCACGCGCTCTAATCTCCCGGGTAAGTAAAGTACAA
TAGCATGACAGAAATTCTATTGCCGCGGCCATTGTCGACGTTAGGCTGAT
GATATGCCTAGGACATATGGAATGCCAATCAAGCTTAGCTTACATTTGGG
GGGATGAACAGAGATGGTCCGTTTATGCGATAGAAGCTATACTATGCGAT
TTGAATATTTGA
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Coding sequence (CDS) from alignment at CM002462.1:918113..918374+

>rna4123 ID=rna4123|Name=rna4123|organism=Nannochloropsis gaditana|type=CDS|length=420bp|location=Sequence derived from alignment at CM002462.1:918113..918374+ (Nannochloropsis gaditana)
ATGCCAGCAAGCATTTCACCAAACCCTGGAACCGCAGGCCTCTTCTCTTC
ATGTAAAGAAAATTCTATTGCCGCGGCCATTGTCGACGTTAGGCTGATGA
TATGCCTAGGACATATGGAATGCCAATCAAGCTTAGCTTACATTTGGGGG
GATGAACAGAGATGGTCCGTTTATGCGATAGAAGCTATACTATGCGATTT
GAATATTTGAATGCCAGCAAGCATTTCACCAAACCCTGGAACCGCAGGCC
TCTTCTCTTCATGTAAAGAAAATTCTATTGCCGCGGCCATTGTCGACGTT
AGGCTGATGATATGCCTAGGACATATGGAATGCCAATCAAGCTTAGCTTA
CATTTGGGGGGATGAACAGAGATGGTCCGTTTATGCGATAGAAGCTATAC
TATGCGATTTGAATATTTGA
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Synonyms
Publications