EWM26555.1, cds4113 (CDS) Nannochloropsis gaditana

Overview
NameEWM26555.1
Unique Namecds4113
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:918113..918171 +
Alignment locationCM002462.1:918224..918374 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26555.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100084g16.1563.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:918113..918171 +
CM002462.1supercontigCM002462.1:918224..918374 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26555.1 vs. NCBI_GenBank
Match: gi|585108640|gb|EWM26555.1| (hypothetical protein Naga_100084g16 [Nannochloropsis gaditana])

HSP 1 Score: 143.28 bits (360), Expect = 1.785e-43
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 MPASISPNPGTAGLFSSCKENSIAAAIVDVRLMICLGHMECQSSLAYIWGDEQRWSVYAIEAILCDLNI 69
            MPASISPNPGTAGLFSSCKENSIAAAIVDVRLMICLGHMECQSSLAYIWGDEQRWSVYAIEAILCDLNI
Sbjct:    1 MPASISPNPGTAGLFSSCKENSIAAAIVDVRLMICLGHMECQSSLAYIWGDEQRWSVYAIEAILCDLNI 69
The following BLAST results are available for this feature:
BLAST of EWM26555.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108640|gb|EWM26555.1|1.785e-43100.00hypothetical protein Naga_100084g16 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4123rna4123Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications