rna4069, rna4069 (mRNA) Nannochloropsis gaditana

Overview
Namerna4069
Unique Namerna4069
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1826
Alignment locationCM002462.1:775581..776738 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g44.8286.mrna
Orig protein idgnl|cribi|Naga_100001g44.8286
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:775581..776738 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100001g44gene3915Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26775.1cds4059Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4069rna4069-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4069 ID=rna4069|Name=rna4069|organism=Nannochloropsis gaditana|type=mRNA|length=1826bp
ACTTCGGGTGTCGGAACGTAGGTGGGTGGTACGCATCTCACCTGCCTTCA
GCAGCCGCAACACATAGCTATGCTTCCACACTGCCAGCATGTGCGCGTCG
TTGAACCCGTTACGGCGCTCTTACGTCCAACAAATGCACGGTGGCAGAAT
GGTAAAATTCAGTGCCGAGTTTGCCTCGACGAGGCATTGTGCTTCATGTT
GACAGGGTACGAACAGCGACAACGACGAAGACGCCCAGCCAGCCTCTTTC
CCGCTCGACCGTCTGCAAATCTTCAAGCTCTTTTCTTGTGGAAAAAAAAA
ACATGTAAATTATATGCGTCATTCCGATGAAATTGTGGTCACACCATATC
TTTGGCGTAGGACGCTTTGAAAAGATGCGACGCGAACGGCCATCCGACAC
ATGAAGGGCAGCGAGAGGGAGGAAGTATGTCGCGGTAATCTCTGCTAGCA
CGAAAACGGATGCTTACTTCAGATGACTCAGGGGGGACGCATGCTTCGAC
GTCTCTACCCTCAACCAGGCCTCGACGGACGCGACAAAGCATTATTAGCA
AATTGAACGATTTCGTCCACCGCGATTACATCACAGACATTGTCTTTTAT
GGTTTCTGGCTTGGCTTTTGGGTGTTTATGCCCCCTGTCATACTCCTCGG
TACGCTTCTGCTGGCTGTATACGACCTCATTACCGCGAGAGGCTATCGTC
AGCCGTGTGGCCCCGTGCTGGTCACAGGGTGTGACACAGGCTTCGGCAAG
GCTTTAGCTCTGGCACTAGCTGAAAGACATTGGAAGGTGATTGCTGCTTG
CTCGACGGATACAGGAGTCAAAAGTTACAGAGAGCCTGCCAATGGCTCCA
TGAATATCGATCCAATCAAGCTGGACCTGAGCAATGACGACGAGATTCAG
GCATGCGCCGAGTTACTGGCTGCCCAATACCCAGAGGGGCTTTACGCCCT
GGTCAATAACAACAACAACACCGTGGTAGGGAAAGACGGACTGGTGGAGT
GGATGACCATTGACAACTACAAAATGCACATGGAGGTGAATCTTTATGCA
TTCATTCGTGCTACCAAGGCTTTCCTGCCTTTATTGAAGAAATATACTCG
TCAAGCTTCGAGATGCAAGCCCCGCATCGTGACGTTGAATTCTAATGCCG
GAATAGTCCCAGGGCAGCCCAATGCTTCGTGTTACGCCGTGGCCAAGCAT
GCGTGCGACGCGTGGATGAGCTCCTTGACATTTGAGGCAAACGTGTGGGG
CATCGAGGCGGCCACCGTGTGTCCATGCTGGCACGAGATCGACATTGACT
ACTTCCAGCACGATGTCTTCGCCCGCCTCCCTTTGAGAGTGCAGGAGGAA
TACGGACGACAATACTACAACAAAGTGATGGAGAGCAGTAAGGCGTTGCG
GAATCCCATCATGTGGAAAGCGGAAAATGTGACTCACGCCCTGGTCCACG
CGGTGACGGCGGAGAAGTTGCGCCCTTACGTCGTTGTGGGTATCGATGGC
CGTTTCCTCATGTCCCCGCTCCTGCTCCTGCCGCGCAGGCTGTACAACAC
GATCTTCAGCTGGGGAACGCGTTTCAAGGACGTAAAGCCGCGAGCCTTGG
AATTGCAGGTCCCCCACCGCTCATCATCACTACCAGCTGGTGAAAGTCTA
TAGGGCCACGGAAGCGCAACCAAAGGAGGGAAAAAAGGATCATGTAAGGA
CATGCATCACAGAAATGTGAACCAATATGACTGATGAAAGCAAATCATAC
CTTGTCCTGAAGATAATTTTATTTTAAAGACCCGCAGTTACCACGCGCTT
TATTGAAGTCGCTAGGTTGCGTTTTC
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protein sequence of rna4069

>rna4069-protein ID=rna4069-protein|Name=rna4069|organism=Nannochloropsis gaditana|type=polypeptide|length=385bp
MDLQRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKT
PLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVR
TRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFP
TNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETAL
FDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVN
AAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDN
DASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVG
SIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV
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mRNA from alignment at CM002462.1:775581..776738-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4069 ID=rna4069|Name=rna4069|organism=Nannochloropsis gaditana|type=mRNA|length=1158bp|location=Sequence derived from alignment at CM002462.1:775581..776738- (Nannochloropsis gaditana)
ATGGACTTACAGCGACATCTCGATGCTGTGGACCCTGAGAAAGGAGAAGC
TGTATCTGCCCAAAATGCCGCTCCCACACTTGAGCTGGGCCTTAGTTTGA
CGGCATTGTGGGTAGGATACTATCGCATGCGGGAGGTCGAACAGAAAACC
CCTCTTTTCTATGACCCTGTGGCAAAAGCAATAATGGGAGAAGATGATGC
GCGGTGGGCTTTCCAACGTATGCAAGAGACGCTTGAGGATAGTTGGCTTA
TGAGCAAGGCTGCATATGCGCGCAGCGAGGCGAACTTTTTTCCTGTGCGC
ACTCGATTCATCGATGACCACATAGGGCGGTCGCTTGAAGCCCAGATCCT
TTGCGCGCAAAGTACTTCCGGCGGAAAACCGCCCCGGCAATTGCAGGTTG
TAGACATGGCCTGTGGGTTCGACGGCAGGGCATTCCGGCTCGACTTTCCC
ACCAACACCCTCTTTTTTGAAGTGGATCGGGAAGAGGTGATGGCTCTCAA
AAAAAGCCGACTCTCTCAAATAAGACCGCCCGACCTCACCTGCGCTCGAC
GTGTCTGCATATCTGCTGATATTATCACAGACAAATGGGAGACAGCGCTG
TTCGACAATGGTTTTGATCCCGCTTTGCCCACCGTATGGATCATGGAAGG
CATTCTGACGTATCTTCCCTTGCCTGTAGCCAAGGCACTCTTGGCACGGG
TGCGCGCCATCTCGGCACCGGGCTCTTCATTGGTATGCGATGTGGTGAAT
GCCGCAATCAAATACGCTACACCCATGAAAAAAAGGATGAGGTTCTTGCG
TGACGAAGGGGCTGAGTATAACCTCTTCATCTCAGATCCTATTGCCTTTT
GGACCAACGCCGGCTTCTCCCAGATTCGCTATCATTTCCCTGGCGACAAC
GATGCCAGCTATGGTCGTATACCTCCCCATCCCTTCTTGCAGGTTATGCG
GATCGTCATTCGTTTTGTAATTGCTGTGCTATATCTTGGTGCAGGATTCT
TAAGCGGCTTCTTCTTACCGATTTGGGCGGGGATAATAGTCCTTGTTGGA
AGCATCGTCCTGTGCGAGGGTTGGGCGTTGCTTTTTCAAGAGTGGTTGGC
ACGGCGGCTGACCCTCTTCTTTTTTCCATTGGCTTATTTCACTGAAGTTT
TTGTATAA
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Coding sequence (CDS) from alignment at CM002462.1:775581..776738-

>rna4069 ID=rna4069|Name=rna4069|organism=Nannochloropsis gaditana|type=CDS|length=1158bp|location=Sequence derived from alignment at CM002462.1:775581..776738- (Nannochloropsis gaditana)
ATGGACTTACAGCGACATCTCGATGCTGTGGACCCTGAGAAAGGAGAAGC
TGTATCTGCCCAAAATGCCGCTCCCACACTTGAGCTGGGCCTTAGTTTGA
CGGCATTGTGGGTAGGATACTATCGCATGCGGGAGGTCGAACAGAAAACC
CCTCTTTTCTATGACCCTGTGGCAAAAGCAATAATGGGAGAAGATGATGC
GCGGTGGGCTTTCCAACGTATGCAAGAGACGCTTGAGGATAGTTGGCTTA
TGAGCAAGGCTGCATATGCGCGCAGCGAGGCGAACTTTTTTCCTGTGCGC
ACTCGATTCATCGATGACCACATAGGGCGGTCGCTTGAAGCCCAGATCCT
TTGCGCGCAAAGTACTTCCGGCGGAAAACCGCCCCGGCAATTGCAGGTTG
TAGACATGGCCTGTGGGTTCGACGGCAGGGCATTCCGGCTCGACTTTCCC
ACCAACACCCTCTTTTTTGAAGTGGATCGGGAAGAGGTGATGGCTCTCAA
AAAAAGCCGACTCTCTCAAATAAGACCGCCCGACCTCACCTGCGCTCGAC
GTGTCTGCATATCTGCTGATATTATCACAGACAAATGGGAGACAGCGCTG
TTCGACAATGGTTTTGATCCCGCTTTGCCCACCGTATGGATCATGGAAGG
CATTCTGACGTATCTTCCCTTGCCTGTAGCCAAGGCACTCTTGGCACGGG
TGCGCGCCATCTCGGCACCGGGCTCTTCATTGGTATGCGATGTGGTGAAT
GCCGCAATCAAATACGCTACACCCATGAAAAAAAGGATGAGGTTCTTGCG
TGACGAAGGGGCTGAGTATAACCTCTTCATCTCAGATCCTATTGCCTTTT
GGACCAACGCCGGCTTCTCCCAGATTCGCTATCATTTCCCTGGCGACAAC
GATGCCAGCTATGGTCGTATACCTCCCCATCCCTTCTTGCAGGTTATGCG
GATCGTCATTCGTTTTGTAATTGCTGTGCTATATCTTGGTGCAGGATTCT
TAAGCGGCTTCTTCTTACCGATTTGGGCGGGGATAATAGTCCTTGTTGGA
AGCATCGTCCTGTGCGAGGGTTGGGCGTTGCTTTTTCAAGAGTGGTTGGC
ACGGCGGCTGACCCTCTTCTTTTTTCCATTGGCTTATTTCACTGAAGTTT
TTGTATAA
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Synonyms
Publications