EWM26775.1, cds4059 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|585108863|gb|EWM26775.1| (hypothetical protein Naga_100001g44 [Nannochloropsis gaditana]) HSP 1 Score: 790.03 bits (2039), Expect = 0.000e+0 Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query: 1 MDLQRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVGSIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV 385
MDLQRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVGSIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV
Sbjct: 1 MDLQRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVGSIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV 385
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|553196608|ref|XP_005856382.1| (methyltransferase, partial [Nannochloropsis gaditana CCMP526] >gi|422292667|gb|EKU19969.1| methyltransferase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0 Identity = 383/385 (99.48%), Postives = 384/385 (99.74%), Query Frame = 0
Query: 1 MDLQRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVGSIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV 385
MD QRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKK+RLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVGSIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV
Sbjct: 10 MDGQRHLDAVDPEKGEAVSAQNAAPTLELGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKNRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIPPHPFLQVMRIVIRFVIAVLYLGAGFLSGFFLPIWAGIIVLVGSIVLCEGWALLFQEWLARRLTLFFFPLAYFTEVFV 394
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|639149232|ref|WP_024491297.1| (SAM-dependent methyltransferase [Streptomyces sp. AW19M42]) HSP 1 Score: 140.969 bits (354), Expect = 1.798e-35 Identity = 93/290 (32.07%), Postives = 141/290 (48.62%), Query Frame = 0
Query: 34 TALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQL-QVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGR----IPPHPFLQVMRI 318
TAL R E ++ L+ DP A ++GE + Q + E ++ + Y S ++ +RTRF DD + +G RQ+ Q+V G D RA+R+ +P + +FEVDR V+A K RL + P A R ++ D+ D WE+ L D G+DP LP+ W++EG+L Y+P P +L RV AI+APGS + DVVNAA M+ + + G + +P + GFS + PG+ A +GR +PP V R+
Sbjct: 11 TALLTAALRSAETLREDRLYEDPFAARLVGE----YGPQLLAEVHAATFPADRPRYLPSTPDYNAIRTRFFDDFL--------------AGAAQDRQMSQIVLAPSGMDSRAYRMSWPDHIRYFEVDRPAVLAFKSDRLQGVAP---RVAHR-SVAVDLTADNWESQLIDAGYDPTLPSTWLLEGLLYYIPEPDTHRMLERVAAITAPGSRIAADVVNAAALSLPHMRGLLDVFANWGCPWLFGTDEPEDLFDRYGFS-VEATQPGEPGADFGRWPDPVPPRDVKNVRRV 277
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|1087398820|emb|SDH16315.1| (methyltransferase, TIGR00027 family [Sinosporangium album]) HSP 1 Score: 135.191 bits (339), Expect = 2.930e-33 Identity = 98/281 (34.88%), Postives = 136/281 (48.40%), Query Frame = 0
Query: 30 GLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEAN-FFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLS-QIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIP 308
G++ TA W R RE + LF DP+A + G A A R T S+AA E N F P+RTR+ DD L A++ G QVV + G D RA RLD+P T+ FEVD+ ++A KK RLS P C R V ++ + D WE+AL + GFDP PTVW EG+L YLP P+A ++++ +SA GS D++ I ++ + L + G+ + DP F G+ + PG A YGR P
Sbjct: 14 GVAQTARWTAASRARESRRPDRLFDDPLAALLAGPHAA--ALLRHFHT-------SRAA---DEGNPFLPIRTRWFDD---------FLRAKAGKTGH-----QVVGLGAGLDTRAHRLDWPDGTVIFEVDQAALLAYKKERLSTSASVPRCDC-RTVPVN---LGDDWESALMEQGFDPTAPTVWFAEGLLFYLPEPLAHQVVSQAVKLSAAGSGFAADLIGTGIFRLPYIRPFLDRLNEAGSPWVFGTDDPRGFVERCGWRVTQVTEPGRPGADYGRWP 264
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|1121500177|ref|WP_073730520.1| (SAM-dependent methyltransferase [Streptomyces sp. CB02414] >gi|1115722140|gb|OKI81360.1| hypothetical protein AMK11_25680 [Streptomyces sp. CB02414]) HSP 1 Score: 130.954 bits (328), Expect = 1.078e-31 Identity = 85/289 (29.41%), Postives = 137/289 (47.40%), Query Frame = 0
Query: 34 TALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGR----IPPHPFLQVMRI 318
TAL R E + L+ DP A ++G+ R + E ++ + S ++ +RTRF D+++ R++ + + Q+V G D RA+RL +P + +FEVDR V+ K RL + P A ++ D+ D WE L D G++P+LP+ W++EG+L Y+P P +L RV AISAPGS + D+VN A M+ + G + +P + GF ++R PG+ A +GR +PP +V R+
Sbjct: 11 TALLTAALRSAETLRGDRLYEDPYAARLVGDVGPRL----LAELRAATFPADRPRTLPSTPDYNAIRTRFFDEYLQRAVAEREMT-------------QIVLAPAGMDSRAYRLPWPAHIRYFEVDRPSVLTFKADRLGGVEP----RADHRTVAVDLTADDWEKELIDAGYNPSLPSTWLLEGLLYYIPEPDVHRMLERVAAISAPGSRISADIVNRAALTLPHMRALLDMFARWGCPWVFGEDEPEQLFARHGF-EVRAVQPGEPGADFGRWPDPVPPREIREVRRV 277
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|1100226750|ref|WP_071367558.1| (SAM-dependent methyltransferase [Streptomyces sp. MUSC 93] >gi|1099349746|gb|OIJ89725.1| hypothetical protein BIV24_19055 [Streptomyces sp. MUSC 93]) HSP 1 Score: 130.183 bits (326), Expect = 1.965e-31 Identity = 84/264 (31.82%), Postives = 131/264 (49.62%), Query Frame = 0
Query: 45 EVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGRIP 308
E + L+ DP A + G+ + + E + ++ + S ++ +RTRF DD + + AQ P Q+V G D RA+RL++P + +FEVDR V+ K RL + P RRV + D+ +D WE L D G+DP+LP+ W++EG+L Y+P P + LL RV AISAPGS + D+VNAA ++ ++ + G + +P A + GF + PG+ A +GR P
Sbjct: 22 ETRRTDRLYEDPYAARLAGD----AGPELLAEMRDATFPPDRPRTQPSAPDYNAIRTRFFDDFL-------LGAAQE------PDMTQIVLAPAGMDSRAYRLNWPGHIRYFEVDRPAVLEFKADRLQDVTP--QVARRRVAV--DLTSDDWEKQLVDAGYDPSLPSTWLIEGLLHYIPEPGVRRLLERVAAISAPGSRIAADLVNAAALTLPHVQGQLDIFKAWGCPWVFGSDEPEALFDRCGFD-VDATQPGEPGADFGRWP 263
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|518378120|ref|WP_019548327.1| (SAM-dependent methyltransferase [Streptomyces sulphureus]) HSP 1 Score: 129.798 bits (325), Expect = 2.387e-31 Identity = 87/278 (31.29%), Postives = 130/278 (46.76%), Query Frame = 0
Query: 45 EVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGR----IPPHPFLQVMRI 318
E + L+ DP A + GE ++E ++ ++ S ++ +RTRF DDH+ CA P Q+V G D RA+R+D+P + +FEVDR V+A K RL RP R ++AD+ WE L D G+DP+LP+ W++EG+L Y+P A +L RV + APGS +V D+VNAA M + G + +P A + GF + PG+ A +GR +PP V R+
Sbjct: 22 ETRRDDRLYSDPYAADLAGESGP----GLLEEVRTATFPPGRSRTLPSTPDYNAIRTRFFDDHLQE-------CA------APAEMTQIVLAPAGMDSRAYRMDWPDHVRYFEVDRPAVLAHKAERLGDARP----RVRHRTVAADLTGRDWEFMLRDAGYDPSLPSTWLLEGLLYYVPEADAHRILERVADLMAPGSRIVADLVNAAALTLPHMHDLLEVFAGWGCPWLFGSDEPEALFARHGFEVVAAQ-PGEPGADFGRWPDPVPPRTVADVRRV 277
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|664555805|ref|WP_031070629.1| (SAM-dependent methyltransferase [Streptomyces sp. NRRL S-118]) HSP 1 Score: 129.798 bits (325), Expect = 2.573e-31 Identity = 88/278 (31.65%), Postives = 135/278 (48.56%), Query Frame = 0
Query: 47 EQKTP--LFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGR----IPPHPFLQVMRI 318
E K P L+ DP A A+ G+ + + E ++ + S ++ +RTRF DD++ + P Q+V G D RA+RLD+P++ ++EVDR V+A K+ +L P T RRV + D+ + WE L D G+DPALP+ W++EG+L Y+P P +L RV A+SAPGS + D+VNAA M+ + G + +P + GF +R PG+ A +GR +PP V R+
Sbjct: 22 ESKRPDRLYEDPYAAALAGD----IGPELLAEVRAATFPPGRERTLPSTPDYNAIRTRFFDDYL-------------QDAAQDPAMTQIVLAPAGMDSRAYRLDWPSHVRWYEVDRPAVLAYKEEQLGAAARP-RTDHRRVAV--DLTSPDWERDLCDAGYDPALPSTWLLEGLLYYIPEPDTHRILQRVAAVSAPGSRIAADIVNAAALTLPHMRGLLDVFSGWGCPWLFGSDEPEELFARYGF-DVRAVQPGEEGADFGRWPDPVPPRSVRDVRRV 278
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|494135141|ref|WP_007074898.1| (SAM-dependent methyltransferase [Micromonospora sp. ATCC 39149] >gi|237884801|gb|EEP73629.1| methyltransferase [Micromonospora sp. ATCC 39149]) HSP 1 Score: 129.798 bits (325), Expect = 2.683e-31 Identity = 98/294 (33.33%), Postives = 141/294 (47.96%), Query Frame = 0
Query: 29 LGLSLTALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGD----NDASYGRIPPHPFLQVMRI 318
LG+S TA W+ + R E + LF DP+A A++ E +E L + VRTRF D+++ R+ P + QVV +A GFD RAFRLD+P +T +EVD EV+ALK+ L++ PP+ C RV I AD+ D W L GFDP PTVW++EG+L YL A+ L+ ++ A+SA S+L + VN A +K +R + + G + ++DP + G+ R P D R PP VMR
Sbjct: 2 LGVSGTARWITHARAAETLRADRLFADPLAIALL-------------ERMEPEVLTQLRENPTPRFDVLAVRTRFFDEYLRRA-------------SPQPGRRQVVILAAGFDTRAFRLDWPPDTTVYEVDLPEVVALKEPFLAEHAPPERPC-HRVAIPADLTRD-WADRLCGAGFDPGRPTVWLVEGLLYYLTDAEAETLIRQIHALSAADSTLALEHVNPDTYRAPWLKDWLREMGEGGRPWQSGVADPEEWLCALGWD-ARVREPSDLAIARRRWVPRTPPRTVPGVMRT 266
BLAST of EWM26775.1 vs. NCBI_GenBank
Match: gi|664211902|ref|WP_030745040.1| (SAM-dependent methyltransferase [Streptomyces sp. NRRL F-5135]) HSP 1 Score: 129.413 bits (324), Expect = 3.231e-31 Identity = 92/289 (31.83%), Postives = 140/289 (48.44%), Query Frame = 0
Query: 34 TALWVGYYRMREVEQKTPLFYDPVAKAIMGEDDARWAFQRMQETLEDSWLMSKAAYARSEANFFPVRTRFIDDHIGRSLEAQILCAQSTSGGKPPRQLQVVDMACGFDGRAFRLDFPTNTLFFEVDREEVMALKKSRLSQIRPPDLTCARRVCISADIITDKWETALFDNGFDPALPTVWIMEGILTYLPLPVAKALLARVRAISAPGSSLVCDVVNAAIKYATPMKKRMRFLRDEGAEYNLFISDPIAFWTNAGFSQIRYHFPGDNDASYGR----IPPHPFLQVMRI 318
TAL R E ++ L+ DP A A+ GE + E ++ +A S ++ +RTRF DD++ R+ A+ S Q+V G D RA+RL +P +FE+DR V+A K+ RL P ++AD+ + WE L G+DPA+P+VW++EG+L Y+P A+ +L RV A SAPGS + D+V AA M+ + G + +P A + AG++ +R PG+ DA YGR +PP V R+
Sbjct: 12 TALLTAALRAVESRREDRLYEDPYAAALAGETGP----GLLAEVHAATFPPGRARTLPSTPDYNAIRTRFFDDYLQRA-------ARDAS------TPQIVLAPAGMDSRAYRLGWPDRVRWFELDRPAVLAYKEDRLGTAVP----RVNHREVAADLTAEDWERRLEAAGYDPAVPSVWLLEGLLYYIPEADARRILHRVAAFSAPGSRIAADIVGAAALTLPHMRGLLDVFAGWGCPWLFGTDEPEALFEEAGYT-VRAVQPGEEDADYGRWPDPVPPRGEPGVRRV 278 The following BLAST results are available for this feature:
BLAST of EWM26775.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|