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Properties
| Property Name | Value |
|---|
| Product | centrin |
| Orig transcript id | gnl|cribi|Naga_100001g57.8089.mrna |
| Orig protein id | gnl|cribi|Naga_100001g57.8089 |
| Gene | Centrin |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:727929..729129 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4056 ID=rna4056|Name=rna4056|organism=Nannochloropsis gaditana|type=mRNA|length=1652bp
TAACACAGCGAGGCTTCGACGACCGCAGTAATTGTCGTATTTAACATGTT
TCGAGTTGCCTCTGTTACCCGAGTCGCCGGGAGTAGTTGGAAGAAGGTGC
GTCTCGAGGGACAATATTCATGCAGTGGGATGGAAAGATCTGTGAAAGCT
GGAGCCCAAGATCCGGCCTTTGCAATACGGAAGTGGTGCCCCACGCCTGT
CAGGTTTTGTATGATCTCATAACTAGGTGCAGTTGACAATACATGTGCAT
TGGGAAGAAAGTGGCGTGTTCGCCTGATTGTGATGTGGATCAATTACCGT
GTTAACCTCCTCGCCCTCACCAGGCGGCCTTCACCACCTCCGCTGCGCGC
CATGCTCCTTTACGGGTCGGTATCAATGGTTTCGGCCGTATTGGGCGCCT
TGTTTTACGTGCTGCTCAACAGCACCCTGAAGTTGAAGTTGTTGCCGTCA
ACGATCCTTTTATCGACACAAACTACATCGAATACATGTTCAAATATGAT
ACTGTGCATGGTCGCTACAAAGGGAGTGTTTCGCATGATGAGCACAACTT
GATCATTGATGGCAAGGAAGTCAAATGCTATCAGGAGATGGAGGCTGGCA
AGATCAAATGGGACGCAGTAGGCGCTGACTACATTGTGGATGCGACAGGG
ATCAATCTGACCAAGGGCACCGCGGAAGCTCACTTCAAAAACGGCGCGAA
GAAGGTGGTCATGTCTGCGCCCTCTAAGGACGACACCCCCATGTTCGTGT
GCGGCGTCAACCTGGAGGCCTACAAGGGAGAAAAAATTGTATCGAATGCC
TCCTGCACTACCAACTGCCTGGCTCCTCTGGCCAAGGTTATCAACGATAC
CTTCGGCTTGGAGGAGGGCCTTATGACCACGGTGCACGCGGTGACTGCCA
CGCAAAAGACGGTGGACGGGCCCAGCAAGAAGGATTGGCGCGGAGGCCGC
GGGGCCGGATTCAACATTATCCCATCCAGTACAGGTGCTGCGAAAGCAGT
GGGGAAGGTCATTCCCGCGTTGAATGGGAAGCTTACCGGCATGGCCTTCC
GTGTCCCGACCGCCGATGTCTCTGTCGTGGACTTGACCTGCCGACTCAAG
AAGGGCGCGAGCTACGACGAGATCAAGGCGGCACTCAAGGCTGCCAGTGA
GGGGCCAATGCGGGGGATCCTCGGCTACACTGAGGACGACGTCGTCTCCA
CGGACTTTTACGGGGATGCGCATTCGTCCATTTTTGACGCCAAGGCCGGA
ATAGCCCTCACTCCCAACTTTGTCAAACTTGTCTCTTGGTATGACAATGA
AGCTGGCTACTCCAACCGCGTCCTCGATCTCATCAAGCACATTGCGAAGC
ACTAGAGCGGATTGAGGTAAAACGAACACAAGAATTACTTACAAGGGATC
AAACGGGATTGGAGGTATGCAATATTTTAGCGAAGGGCTATGTCGCCAGG
ATCGATGGACCATCATGAGATGCCTTCCTCCGGATGACTCATGTTGCATT
TGTGGTGGAGCTTTAAGTGGGAGGGAGCGACGAAACGAATGATTTATTTT
TCCCTCTGAGGAAGAACATTGTATATCGTGAGGTCTGGACGGTACATTTA
CGCGTTGCGAGTTTCTTTTCACTGTTTGGCTAGACTCTAACCACATCTGA
CC back to topprotein sequence of rna4056 >rna4056-protein ID=rna4056-protein|Name=rna4056|organism=Nannochloropsis gaditana|type=polypeptide|length=162bp
MSYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRAL
GFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAF
RLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEE
DFMRIMKKTNLF back to topmRNA from alignment at CM002462.1:727929..729129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4056 ID=rna4056|Name=rna4056|organism=Nannochloropsis gaditana|type=mRNA|length=1201bp|location=Sequence derived from alignment at CM002462.1:727929..729129+ (Nannochloropsis gaditana)
GTTGCCCGTGTGGCCGATCATTCAGCAATTAAACTTTACCCGAGCTAAAC
GAATCTTCAATTTTTAACCTGGCCCGCGCCATCCTCGATCACAGTGGCTT
TCATTACCACACTCCATCCTTCGCTTGTGACAGACAGCACGAGTACCAGG
CGACAGAAAGAAGTCCGGAGATAATCAATATGTCATATAAAAATGCAGGA
AAGACGAAAAAGCTCGTCCAGTTGACCGAAGAGCAAAGGCAAGAAATCAA
GGAAGCGTTTGAATTGTTCGACACTGAGGGCACCGGCCGCATTGATAGCA
AGGAATTACGTGTTGCAATGCGAGCTCTGGGCTTTGAgcccaaaaaagag
gaggtcATGCGACTCGCGGCAGCGGCAGACGACGACAACTCGGGGACGAT
AACCTACAAGAAGTTTGTGGAAATGATGACAGTTAAAATGGGGGAGAAAG
ATGGACGCGAAGAAATGGTTAAAGCTTTCCGGTTATTCGACGCTGGAGAG
AAGGGAGCTATTAGCTTTCAAGACTTGAGGCGTGTTGCCCGAGAGCTTGG
AGAGTCCATCACAGACGAGGAGTTGCAGGAAATGATTGGTAAGTGCTGGC
ACTGGTAGGGATGTGAGGTAACGCGTCATTATGTTCACATTGTAATTTAG
TTTGTATGCTTGATTGAGTTCATGTCCCCTATGTTTAAGATCATTCTTGA
CCGTATTGTTAGTCATGGTCACCTTTGTTGTGCGTGGTCTCTATAACAGA
AGCAATGTGATTTATATAAGAGACAAGTACTGAACATGAGGTGGTACTTG
ACAGGCGTGATGGAGGAACGCAGATTTACATTCCTCTTCGTTATTTATTT
GTTCACTATAATATCTAGATGAAGCTGATCGGGACGGCGATGGGCTTGTG
AGTGAAGAAGACTTCATGCGAATTATGAAAAAAACAAATCTTTTTTGAGG
GGGAGCATGGTATAGCGGAAAacatgggaaaaaaaaacataaAACAATAT
GTATCTTTTGAATAAAATTACCGCAGAGTACATGGTGTAACAAGAATTTC
TTTTCGCTCGACTGTTGCGCTTCAAGATGAAAGAGTAAATAAGGGTGTAT
TTGTTACCAGACGACGAAAGCAAAAGGGGAAAATCTCCACGATATACGTC
CTGGCAAAAGGACAGATAATCTCACGAAGTCGTGTGTGTAAGAatctttt
t back to topCoding sequence (CDS) from alignment at CM002462.1:727929..729129+ >rna4056 ID=rna4056|Name=rna4056|organism=Nannochloropsis gaditana|type=CDS|length=978bp|location=Sequence derived from alignment at CM002462.1:727929..729129+ (Nannochloropsis gaditana)
ATGTCATATAAAAATGCAGGAAAGACGAAAAAGCTCGTCCAGTTGACCGA
AGAGCAAAGGCAAGAAATCAAGGAAGCGTTTGAATTGTTCGACACTGAGG
GCACCGGCCGCATTGATAGCAAGGAATTACGTGTTGCAATGCGAGCTCTG
GGCTTTGAgcccaaaaaagaggaggtcATGCGACTCGCGGCAGCGGCAGA
CGACGACAACTCGGGGACGATAACCTACAAGAAGTTTGTGGAAATGATGA
CAGTTAAAATGGGGGAGAAAGATGGACGCGAAGAAATGGTTAAAGCTTTC
CGGTTATTCGACGCTGGAGAGAAGGGAGCTATTAGCTTTCAAGACTTGAG
GCGTGTTGCCCGAGAGCTTGGAGAGTCCATCACAGACGAGGAGTTGCAGG
AAATGATTGATGAAGCTGATCGGGACGGCGATGGGCTTGTGAGTGAAGAA
GACTTCATGCGAATTATGAAAAAAACAAATCTTTTTTGAATGTCATATAA
AAATGCAGGAAAGACGAAAAAGCTCGTCCAGTTGACCGAAGAGCAAAGGC
AAGAAATCAAGGAAGCGTTTGAATTGTTCGACACTGAGGGCACCGGCCGC
ATTGATAGCAAGGAATTACGTGTTGCAATGCGAGCTCTGGGCTTTGAgcc
caaaaaagaggaggtcATGCGACTCGCGGCAGCGGCAGACGACGACAACT
CGGGGACGATAACCTACAAGAAGTTTGTGGAAATGATGACAGTTAAAATG
GGGGAGAAAGATGGACGCGAAGAAATGGTTAAAGCTTTCCGGTTATTCGA
CGCTGGAGAGAAGGGAGCTATTAGCTTTCAAGACTTGAGGCGTGTTGCCC
GAGAGCTTGGAGAGTCCATCACAGACGAGGAGTTGCAGGAAATGATTGAT
GAAGCTGATCGGGACGGCGATGGGCTTGTGAGTGAAGAAGACTTCATGCG
AATTATGAAAAAAACAAATCTTTTTTGA back to top
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