EWM26578.1, cds4046 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|585108666|gb|EWM26578.1| (centrin [Nannochloropsis gaditana]) HSP 1 Score: 319.316 bits (817), Expect = 3.066e-110 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MSYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
MSYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF
Sbjct: 1 MSYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|955171700|emb|CUG86137.1| (centrin, putative [Bodo saltans]) HSP 1 Score: 223.787 bits (569), Expect = 2.182e-72 Identity = 112/162 (69.14%), Postives = 137/162 (84.57%), Query Frame = 0
Query: 1 MSYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
MS A K K +LTEEQRQEIKEAF+LFDT+G+G ID+KEL+VAMRALGFEPKKEE+ ++ + D D SGTI + +F+EMMT KM EKD REE++KAFRLFD E G ISF++L+RVA+ELGE++TDEELQEMIDEADRDGDG VSEE+F+RIMKKT+L+
Sbjct: 1 MSKPGAAKPKGKPELTEEQRQEIKEAFDLFDTDGSGSIDAKELKVAMRALGFEPKKEEIRKMISDIDTDGSGTIDFNEFLEMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVSEEEFLRIMKKTSLY 162
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|403360539|gb|EJY79948.1| (Caltractin (Centrin), putative (macronuclear) [Oxytricha trifallax] >gi|403362782|gb|EJY81125.1| Caltractin (Centrin), putative (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 223.016 bits (567), Expect = 4.078e-72 Identity = 111/163 (68.10%), Postives = 138/163 (84.66%), Query Frame = 0
Query: 2 SYKNA--GKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
+YK K K+ +LTEEQ+QEIKEAF+LFDT+G+G ID+KEL+VAMRALGFEPKKEE+ ++ A D D SG I + +F++MMTVKM E+D REEM+KAFRLFD E G ISF++L+RVA+ELGE++TDEE+QEMIDEADRDGDG +SEE+FMRIMKKTNLF
Sbjct: 3 TYKKTQIAKPKRRTELTEEQKQEIKEAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIRKMIADVDKDGSGVIDFTEFLDMMTVKMAERDPREEMLKAFRLFDDDESGKISFKNLKRVAKELGENMTDEEIQEMIDEADRDGDGEISEEEFMRIMKKTNLF 165
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|678342845|emb|CDW72743.1| (centrin [Stylonychia lemnae]) HSP 1 Score: 222.631 bits (566), Expect = 5.603e-72 Identity = 111/163 (68.10%), Postives = 138/163 (84.66%), Query Frame = 0
Query: 2 SYKNA--GKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
+YK K K+ +LTEEQ+QEIKEAF+LFDT+G+G ID+KEL+VAMRALGFEPKKEE+ ++ A D D SG I + +F++MMTVKM E+D REEM+KAFRLFD E G ISF++L+RVA+ELGE++TDEE+QEMIDEADRDGDG +SEE+FMRIMKKTNLF
Sbjct: 3 TYKKTQIAKPKRRTELTEEQKQEIKEAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIRKMIADVDKDGSGVIDFTEFLDMMTVKMAERDPREEMLKAFRLFDDDETGKISFKNLKRVAKELGENMTDEEIQEMIDEADRDGDGEISEEEFMRIMKKTNLF 165
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|403337175|gb|EJY67793.1| (Ca2+-binding protein (EF-Hand superfamily) (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 220.32 bits (560), Expect = 4.955e-71 Identity = 109/163 (66.87%), Postives = 137/163 (84.05%), Query Frame = 0
Query: 2 SYKNA--GKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
+YK K K+ +LTEEQ+QEIKEAF+LFDT G+G ID+KEL+VAMRALGFEPKKEE+ ++ + D D SG I + +F++MMTVKM E+D REEM+KAFRLFD E G ISF++L+RVA+ELGE++TDEE+QEM+DEADRDGDG +SEE+FMRIMKKTNLF
Sbjct: 3 TYKKTQIAKPKRRTELTEEQKQEIKEAFDLFDTNGSGTIDAKELKVAMRALGFEPKKEEIRKMISDVDKDGSGVIDFTEFLDMMTVKMAERDPREEMLKAFRLFDDDETGRISFKNLKRVAKELGENMTDEEIQEMVDEADRDGDGEISEEEFMRIMKKTNLF 165
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|635363141|emb|CCI48284.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 219.55 bits (558), Expect = 1.329e-70 Identity = 108/158 (68.35%), Postives = 138/158 (87.34%), Query Frame = 0
Query: 5 NAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
NA KTKK +LTEEQ+QEI+EAF+LFDT+G+G ID+KEL+VAMRALGFEPKKEE+ ++ A D D SGTI + +F+EMMT KM EKD +EE++KAFRLFD E G I+F++L+RVA+ELGE++TDEELQEMIDEADRDGDG ++EE+F+RIMKKT+L+
Sbjct: 17 NAAKTKKF-ELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFTEFLEMMTTKMSEKDSKEEIIKAFRLFDDDETGKITFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 173
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|1129982141|ref|XP_019747777.1| (PREDICTED: caltractin [Hippocampus comes]) HSP 1 Score: 218.009 bits (554), Expect = 4.734e-70 Identity = 107/161 (66.46%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 2 SYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
S+K +K ++L+EEQ+QEIKEAF+LFD++GTG+ID KEL+VAMRALGFEPKKEE+ ++ A D + SGTI Y F+ MMT+KMGEKD REE++KAFRLFD G ISF++L+RVA+ELGE++TDEELQEMIDEADRDGDG V+E++F+RIMKKTNL+
Sbjct: 13 SHKKKASSK--IELSEEQKQEIKEAFDLFDSDGTGKIDVKELKVAMRALGFEPKKEEIKKMIADIDKEGSGTIDYSDFLSMMTLKMGEKDSREEIMKAFRLFDDDCTGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTNLY 171
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|1102622279|emb|CRH03075.1| (centrin-1, putative [Plasmodium relictum]) HSP 1 Score: 217.624 bits (553), Expect = 5.950e-70 Identity = 106/159 (66.67%), Postives = 134/159 (84.28%), Query Frame = 0
Query: 4 KNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
+NA K +L EEQ+ EIKEAF+LFDT GTGRID+KEL+VAMRALGFEPKKE++ ++ A D D SGTI + F+++MT+KM E+D +EE++KAFRLFD E G ISF++L+RVA+ELGE+ITDEE+QEMIDEADRDGDG ++EE+FMRIMKKTNLF
Sbjct: 3 RNANTRNKRNELNEEQKLEIKEAFDLFDTNGTGRIDAKELKVAMRALGFEPKKEDIRKIIADVDKDGSGTIDFNDFLDIMTIKMSERDPKEEILKAFRLFDDDETGKISFKNLKRVAKELGENITDEEIQEMIDEADRDGDGEINEEEFMRIMKKTNLF 161
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|299115213|emb|CBN74045.1| (centrin [Ectocarpus siliculosus]) HSP 1 Score: 216.468 bits (550), Expect = 1.986e-69 Identity = 106/161 (65.84%), Postives = 137/161 (85.09%), Query Frame = 0
Query: 2 SYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
+ K G K +LTEEQ+QEI+EAF+LFDT+G+G ID+KEL+VAMRALGFEPKKEE+ ++ + D D SGTI +++F+EMMT KM EKD REE++KAFRLFD E G ISF++L+RVA+ELGE++TDEELQEMIDEADRDGDG ++EE+F+RIMKKT+L+
Sbjct: 4 TSKRGGAKSKKFELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISDIDKDGSGTIDFQEFLEMMTSKMSEKDSREEILKAFRLFDDDETGKISFRNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 164
BLAST of EWM26578.1 vs. NCBI_GenBank
Match: gi|922855507|gb|KOO23951.1| (centrin [Chrysochromulina sp. CCMP291]) HSP 1 Score: 216.083 bits (549), Expect = 2.120e-69 Identity = 108/161 (67.08%), Postives = 138/161 (85.71%), Query Frame = 0
Query: 2 SYKNAGKTKKLVQLTEEQRQEIKEAFELFDTEGTGRIDSKELRVAMRALGFEPKKEEVMRLAAAADDDNSGTITYKKFVEMMTVKMGEKDGREEMVKAFRLFDAGEKGAISFQDLRRVARELGESITDEELQEMIDEADRDGDGLVSEEDFMRIMKKTNLF 162
+ K GKT K +LTEEQ+QEI+EAF+LFDT+G+G ID+KEL+VAMRALGFEPKKEE+ ++ A D D SGTI + +F++MMT KM EKD REE++KAFRLFD E G ISF++L+RVA+ELGE++TDEELQEMIDEADRDGDG ++EE+F+RIMKKT+L+
Sbjct: 5 TAKKGGKTGK-AELTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFDEFLQMMTAKMSEKDSREEILKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEINEEEFLRIMKKTSLY 164 The following BLAST results are available for this feature:
BLAST of EWM26578.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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