Naga_100001g156, gene3815 (gene) Nannochloropsis gaditana

Overview
NameNaga_100001g156
Unique Namegene3815
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:519847..524478 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g156
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:519847..524478 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02480NO08G02480Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3964rna3964-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3965rna3965-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna3966rna3966-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3964rna3964Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3965rna3965Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna3966rna3966Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3964

>rna3964-protein ID=rna3964-protein|Name=rna3964|organism=Nannochloropsis gaditana|type=polypeptide|length=817bp
MPDPAFFQCLGVTRATLTPSLLVNLLHCNAPILSRGQLRFCLCSGETLSF
ITARTLLMRAPLCTIIHLYGSTEVSGDASWTTLTTGDLEYGKTANLDIVP
LGKPLPGTRMWLVGSETSTKLEVGQIGMPVDMNGELWVEGPGVALGYYGK
QGIHSNFVAKERDGHPVFKTGDLVRCISDTTNTSLYFLHRRDSSAKVRGV
WIHLEEGERELALALGLNSKEELGLSVVSSNTDTENSELLIALTWKAAQS
WPNLPKLRQRLIGRGISPELMPTRIVIGMKDQLLPLTSNGKLDRQMLSTW
GSEVASRCTSYAEMVRSRFKDDSSGYWLEFCFSKLVGTQDENHIGLGLFQ
RGGHSLLAMQALYHIERHFKAASAGVMIEDMARPVAEISKKIGKNRDTLP
RKRGRSFTAETISDRNQLPTMLQAWTFEFEKCVDAQPCVVSLDNGERLII
VGSHDHYIAALEANTGKVKWRSHTSGRIEGKVAVQNDLIFVPCLDYRLYA
FSLVTGELAWTFITQGELKCTPLPLWLPSPTHDESKGISLVLFGSYDGRI
YVVEASSGACFAKPFPLQGSPYASPIVIPGEKRNSDSDERIITVTNRGRV
AQLKLEREGMVLKGAHLRWALHSDWEQEIGCAVFTTPVYSTTTAYLVFGG
TDGAVVALDPFHGGSIVWRILLDQVQSSPIFISPCLMPRNSETEIELVLI
ACQTSLYCIQTSSGKHCWKRKLETRPDEVITGQPTFLEGSLIVLLTTQFG
KLLLLNLDSELDAVDTGTRELILTGESRLTSPAIITLPKETVFPYRKSWQ
CSIGSRDNKVYMINISG
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protein sequence of rna3965

>rna3965-protein ID=rna3965-protein|Name=rna3965|organism=Nannochloropsis gaditana|type=polypeptide|length=1075bp
MVEGDRIGIDKFSNMSLLAMWKAVVASSGSDTALRVVTNLPIDDLSEYSR
NYVRDLTFEYLDRYSNSLSKLLLKAGVLPGDRIGLHFHASDPGEIISLLA
VLKCAAIYVALDNATCGRIVSDAGVRLVLVGGRENVGKSTIFLPNKTPLL
RIGRWGDISEGDELIRLPLPDPEPPRSSLDGAFNILYTSGSSGPSKGVVG
REKGFVYRIGWMHQAFPFIKDKELVLRRTPLAFVDSVWEIWGALLAGVPL
CIHLTSLGMPDPAFFQCLGVTRATLTPSLLVNLLHCNAPILSRGQLRFCL
CSGETLSFITARTLLMRAPLCTIIHLYGSTEVSGDASWTTLTTGDLEYGK
TANLDIVPLGKPLPGTRMWLVGSETSTKLEVGQIGMPVDMNGELWVEGPG
VALGYYGKQGIHSNFVAKERDGHPVFKTGDLVRCISDTTNTSLYFLHRRD
SSAKVRGVWIHLEEGERELALALGLNSKEELGLSVVSSNTDTENSELLIA
LTWKAAQSWPNLPKLRQRLIGRGISPELMPTRIVIGMKDQLLPLTSNGKL
DRQMLSTWGSEVASRCTSYAEMVRSRFKDDSSGYWLEFCFSKLVGTQDEN
HIGLGLFQRGGHSLLAMQALYHIERHFKAASAGVMIEDMARPVAEISKKI
GKNRDTLPRKRGRSFTAETISDRNQLPTMLQAWTFEFEKCVDAQPCVVSL
DNGERLIIVGSHDHYIAALEANTGKVKWRSHTSGRIEGKVAVQNDLIFVP
CLDYRLYAFSLVTGELAWTFITQGELKCTPLPLWLPSPTHDESKGISLVL
FGSYDGRIYVVEASSGACFAKPFPLQGSPYASPIVIPGEKRNSDSDERII
TVTNRGRVAQLKLEREGMVLKGAHLRWALHSDWEQEIGCAVFTTPVYSTT
TAYLVFGGTDGAVVALDPFHGGSIVWRILLDQVQSSPIFISPCLMPRNSE
TEIELVLIACQTSLYCIQTSSGKHCWKRKLETRPDEVITGQPTFLEGSLI
VLLTTQFGKLLLLNLDSELDAVDTGTRELILTGESRLTSPAIITLPKETV
FPYRKSWQCSIGSRDNKVYMINISG
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protein sequence of rna3966

>rna3966-protein ID=rna3966-protein|Name=rna3966|organism=Nannochloropsis gaditana|type=polypeptide|length=1075bp
MVEGDRIGIDKFSNMSLLAMWKAVVASSGSDTALRVVTNLPIDDLSEYSR
NYVRDLTFEYLDRYSNSLSKLLLKAGVLPGDRIGLHFHASDPGEIISLLA
VLKCAAIYVALDNATCGRIVSDAGVRLVLVGGRENVGKSTIFLPNKTPLL
RIGRWGDISEGDELIRLPLPDPEPPRSSLDGAFNILYTSGSSGPSKGVVG
REKGFVYRIGWMHQAFPFIKDKELVLRRTPLAFVDSVWEIWGALLAGVPL
CIHLTSLGMPDPAFFQCLGVTRATLTPSLLVNLLHCNAPILSRGQLRFCL
CSGETLSFITARTLLMRAPLCTIIHLYGSTEVSGDASWTTLTTGDLEYGK
TANLDIVPLGKPLPGTRMWLVGSETSTKLEVGQIGMPVDMNGELWVEGPG
VALGYYGKQGIHSNFVAKERDGHPVFKTGDLVRCISDTTNTSLYFLHRRD
SSAKVRGVWIHLEEGERELALALGLNSKEELGLSVVSSNTDTENSELLIA
LTWKAAQSWPNLPKLRQRLIGRGISPELMPTRIVIGMKDQLLPLTSNGKL
DRQMLSTWGSEVASRCTSYAEMVRSRFKDDSSGYWLEFCFSKLVGTQDEN
HIGLGLFQRGGHSLLAMQALYHIERHFKAASAGVMIEDMARPVAEISKKI
GKNRDTLPRKRGRSFTAETISDRNQLPTMLQAWTFEFEKCVDAQPCVVSL
DNGERLIIVGSHDHYIAALEANTGKVKWRSHTSGRIEGKVAVQNDLIFVP
CLDYRLYAFSLVTGELAWTFITQGELKCTPLPLWLPSPTHDESKGISLVL
FGSYDGRIYVVEASSGACFAKPFPLQGSPYASPIVIPGEKRNSDSDERII
TVTNRGRVAQLKLEREGMVLKGAHLRWALHSDWEQEIGCAVFTTPVYSTT
TAYLVFGGTDGAVVALDPFHGGSIVWRILLDQVQSSPIFISPCLMPRNSE
TEIELVLIACQTSLYCIQTSSGKHCWKRKLETRPDEVITGQPTFLEGSLI
VLLTTQFGKLLLLNLDSELDAVDTGTRELILTGESRLTSPAIITLPKETV
FPYRKSWQCSIGSRDNKVYMINISG
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Synonyms
Publications