EWM26599.1, cds3912 (CDS) Nannochloropsis gaditana

Overview
NameEWM26599.1
Unique Namecds3912
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:423316..425304 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26599.1
Productth1-like protein
Orig transcript idgnl|cribi|Naga_100001g204.8110.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:423316..425304 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0045892negative regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1
Homology
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|585108687|gb|EWM26599.1| (th1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1361.67 bits (3523), Expect = 0.000e+0
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 0
Query:    1 MANMALLVGKWLQELGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALEDGSVDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDGPAASKSMLLDPAMRKGLRLVYSDMLKKRESDRQTYDRADKSGGGQ 662
            MANMALLVGKWLQELGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALEDGSVDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDGPAASKSMLLDPAMRKGLRLVYSDMLKKRESDRQTYDRADKSGGGQ
Sbjct:    1 MANMALLVGKWLQELGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALEDGSVDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDGPAASKSMLLDPAMRKGLRLVYSDMLKKRESDRQTYDRADKSGGGQ 662          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|953491703|emb|CEG45712.1| (th1 family protein [Plasmopara halstedii])

HSP 1 Score: 184.882 bits (468), Expect = 9.214e-46
Identity = 149/616 (24.19%), Postives = 264/616 (42.86%), Query Frame = 0
Query:   15 LGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALE--------DGS-----VDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDG 617
            +   GA  D   +E++  H++  +   +D      +L G   +  ++  M+  R+WR  L+E+   HK   LL  Y ++ +S  GH+ E+A + S   ++ V  GV+ +  + +P+A    +    A LK++CC +++ + ++Q++L  ++ KL       + TSN  T           R +R +L     E  E   G  GA        R R+++                        +K     D ++ +    + ++++A  L + Y                                        +++   P+A LR   +L  L+  +F+P D + +   +     +   AST  E        +GS     VD E  +     L +ASA+   +  L +NM  SG+   L  ++   PVV+MG LHWL V +  P F +S   +      +R+L+  +       P  F  L   L L P  +    +++KR+ L C VF++++G+VLPV+ F   N  E+D AL+R+F+ +  V   PPYS  FA AL  +L    V  A+++   E+ K  L  F+ T C  ++   S+    QLQ +  + +G
Sbjct:  279 IANKGASWD-PAEEILYRHIKDIVNENYDPKLVSNVLSGSTMEPQWLTQMLSDRKWRLMLIELAETHKTCTLLQ-YAIRRISEAGHHKEIASITSANAFFPVFNGVLVDAFSRIPFATEEEVVEDLAALKKVCCQSSHSYLYAQELLCSMDDKLYSIQKDMKATSNEYT---------HIRMVRSKLNRVHSELQETASGRFGAKIVPYHILRRRYIY------------------------DKNSEFCDAILSIIKTKKCSELSAQALAKEY---------------------------------------QMSKDPPPVAHLRDTMVLSSLLDRLFNPSDLITSAFIQNCVFLLAYAASTKDERSLLQTGVEGSSKQVQVDNESVETTKKALIEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVILTSPGFFSSTPLHICFPSLLRILKESIKLHSAQWPIAFGVLVTSLRLHPDINPVKALELKRETLGCMVFMITNGYVLPVLEFIFTNTLELDQALLRNFITMLFVRIAPPYSQKFALALTRILTHPKVQTAIKTCPRES-KMKLQGFV-TYCAKNSNVLSSD---QLQSLIIMQEG 814          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|566033416|gb|ETI56327.1| (hypothetical protein F443_01077 [Phytophthora parasitica P1569] >gi|567999490|gb|ETL49528.1| hypothetical protein L916_00999 [Phytophthora parasitica] >gi|568028647|gb|ETM02585.1| hypothetical protein L917_00966 [Phytophthora parasitica] >gi|568059258|gb|ETM55835.1| hypothetical protein L914_01006 [Phytophthora parasitica] >gi|570337108|gb|ETO85056.1| hypothetical protein F444_01083 [Phytophthora parasitica P1976] >gi|570997861|gb|ETP54160.1| hypothetical protein F442_01022 [Phytophthora parasitica P10297])

HSP 1 Score: 175.637 bits (444), Expect = 1.339e-42
Identity = 149/616 (24.19%), Postives = 262/616 (42.53%), Query Frame = 0
Query:   15 LGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALE--------DGSVDREEAD-----ALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDG 617
            +   GA  D   +E++  HL+  I   +D      +L G   +  ++  M+  R+WR  L+E+   HK   LL  Y ++ +S  GH+ E+A + S   ++ V  GV+ +  + +P+A+   +    A LK++CC +++ + ++Q++L  ++ KL +    +  TS         A     R +R +L     E  E      GA                     +  P ++            RRR +      F +  L+ V     LE  + A +L  E + ++T                               P+A LR P +L  L+  +F+P D +     +     +   AST  E         GS ++ E D     +    L +ASA+   +  L +NM  SG+   L  ++   PVV+MG LHWL V +  P F +S   +      +R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPV+ F   N  E+D AL+R+F+ +      PP+S  F+ AL  +L    V  A++S   E+  R  ++   + C+ +    S+    QL  +  + +G
Sbjct:  285 IANKGASWD-PAEEILYNHLKDMINENYDPKLVSNVLSGSAMEPEWLTQMLNDRKWRLMLIELAETHKTCTLLQ-YAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMDDKLYLMQKDAVVTS---------AEYTHIRMVRSKLNRVHGELQETASSRFGA---------------------KIVPFHIL-----------RRRYIYDSNSKFCDAILSIVKTKKCLE--LSAEVLAKEYQTSKTPP-----------------------------PVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKSCPPES--RMKLRGFVSFCKKNPNVLSSD---QLHSLTVIQEG 820          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|567971139|gb|ETK96152.1| (hypothetical protein L915_01016 [Phytophthora parasitica] >gi|570961184|gb|ETP26163.1| hypothetical protein F441_01050 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 175.637 bits (444), Expect = 1.357e-42
Identity = 149/616 (24.19%), Postives = 262/616 (42.53%), Query Frame = 0
Query:   15 LGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALE--------DGSVDREEAD-----ALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDG 617
            +   GA  D   +E++  HL+  I   +D      +L G   +  ++  M+  R+WR  L+E+   HK   LL  Y ++ +S  GH+ E+A + S   ++ V  GV+ +  + +P+A+   +    A LK++CC +++ + ++Q++L  ++ KL +    +  TS         A     R +R +L     E  E      GA                     +  P ++            RRR +      F +  L+ V     LE  + A +L  E + ++T                               P+A LR P +L  L+  +F+P D +     +     +   AST  E         GS ++ E D     +    L +ASA+   +  L +NM  SG+   L  ++   PVV+MG LHWL V +  P F +S   +      +R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPV+ F   N  E+D AL+R+F+ +      PP+S  F+ AL  +L    V  A++S   E+  R  ++   + C+ +    S+    QL  +  + +G
Sbjct:  284 IANKGASWD-PAEEILYNHLKDMINENYDPKLVSNVLSGSAMEPEWLTQMLNDRKWRLMLIELAETHKTCTLLQ-YAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMDDKLYLMQKDAVVTS---------AEYTHIRMVRSKLNRVHGELQETASSRFGA---------------------KIVPFHIL-----------RRRYIYDSNSKFCDAILSIVKTKKCLE--LSAEVLAKEYQTSKTPP-----------------------------PVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKSCPPES--RMKLRGFVSFCKKNPNVLSSD---QLHSLTVIQEG 819          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|675163703|ref|XP_008890736.1| (hypothetical protein PPTG_00914 [Phytophthora parasitica INRA-310] >gi|568110085|gb|ETN24692.1| hypothetical protein PPTG_00914 [Phytophthora parasitica INRA-310])

HSP 1 Score: 175.637 bits (444), Expect = 1.364e-42
Identity = 149/616 (24.19%), Postives = 262/616 (42.53%), Query Frame = 0
Query:   15 LGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALE--------DGSVDREEAD-----ALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSDG 617
            +   GA  D   +E++  HL+  I   +D      +L G   +  ++  M+  R+WR  L+E+   HK   LL  Y ++ +S  GH+ E+A + S   ++ V  GV+ +  + +P+A+   +    A LK++CC +++ + ++Q++L  ++ KL +    +  TS         A     R +R +L     E  E      GA                     +  P ++            RRR +      F +  L+ V     LE  + A +L  E + ++T                               P+A LR P +L  L+  +F+P D +     +     +   AST  E         GS ++ E D     +    L +ASA+   +  L +NM  SG+   L  ++   PVV+MG LHWL V +  P F +S   +      +R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPV+ F   N  E+D AL+R+F+ +      PP+S  F+ AL  +L    V  A++S   E+  R  ++   + C+ +    S+    QL  +  + +G
Sbjct:  285 IANKGASWD-PAEEILYNHLKDMINENYDPKLVSNVLSGSAMEPEWLTQMLNDRKWRLMLIELAETHKTCTLLQ-YAIRRISEAGHHKEIASITSANAFFPVFSGVLLDAFSRIPFANEEEVVEDIAALKKVCCQSSHSYVYAQELLCSMDDKLYLMQKDAVVTS---------AEYTHIRMVRSKLNRVHGELQETASSRFGA---------------------KIVPFHIL-----------RRRYIYDSNSKFCDAILSIVKTKKCLE--LSAEVLAKEYQTSKTPP-----------------------------PVAHLRDPMVLSSLLDRLFNPSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSNQVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVLLTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKSCPPES--RMKLRGFVSFCKKNQNVLSSD---QLHSLTVIQEG 820          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|695404971|ref|XP_009523672.1| (hypothetical protein PHYSODRAFT_497217 [Phytophthora sojae] >gi|348681139|gb|EGZ20955.1| hypothetical protein PHYSODRAFT_497217 [Phytophthora sojae])

HSP 1 Score: 172.555 bits (436), Expect = 1.640e-41
Identity = 145/595 (24.37%), Postives = 254/595 (42.69%), Query Frame = 0
Query:   15 LGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLL-VRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALE--------DGSVDREEAD-----ALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCEN 595
            +   GA  D   +E++  HL+  I   +D      +L G   +  ++  M+  R+WR  L+E+   HK   LL  Y ++ +S  G++ E+A + S   ++SV  GV+ +  + +P+A+   +    A L ++CC +++ + ++Q++L  ++ KL  ++ DA  D++  S            R +R +L     E  E   G  GA        R R+++       +A P                 +  D ++ +      ++++A TL              KE +T     P                          +  LR P +L  L+  +F+  D +     +     +   AST  E         GS D  E D     +    L +ASA+   +  L +NM  SG+   L  ++   PVV+MG LHWL V +  P F +S   +      +R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPV+ F   N  E+D AL+R+F+ +      PP+S  F+ AL  +L    V  A++S   E+ K  L  F+    +N
Sbjct:  321 IANKGASWD-PAEEILYSHLKDVINENYDPKLVSNVLSGSAVEPEWLTQMLNDRKWRLMLIELAETHKTCTLLQ-YAIRRISEAGYHKEIASITSANAFFSVFSGVLVDAFSRIPFANEEEVVEDIAALNKVCCQSSHSYVYAQELLCSMDDKLYTMQRDAGADSAEYS----------HIRMVRSKLNRVRGELQETASGRFGAKIVPFHILRRRYIY-------DANP-----------------KFCDAILSIVKSKTCSELSAETLA-------------KEFQTSKAPPP--------------------------VVHLRDPMVLSALLDRLFNRSDSISPAFVQNCVFLLAYAASTKDERSLLQTGVQGSSDHVEVDDDGVESTKKALVEASAICKSDHTLGYNMNQSGVVDRLISVMSV-PVVSMGVLHWLEVILTSPGFFSSTPLHICFPSLLRILKASIKLHVAQWPIAFSVLVTSLRLHPDINPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFSRIAPPFSPKFSVALTKILTHPKVQTAIKSCPPES-KMKLRGFVSFCNKN 838          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|301121290|ref|XP_002908372.1| (negative elongation factor, putative [Phytophthora infestans T30-4] >gi|262103403|gb|EEY61455.1| negative elongation factor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 168.703 bits (426), Expect = 3.107e-40
Identity = 135/581 (23.24%), Postives = 252/581 (43.37%), Query Frame = 0
Query:   15 LGGDGAEPDMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKL-LVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALED---------GSVDREEAD-----ALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEA 580
            +   GA  D   +E++  HL+  +   +D      +L G   +  ++  M+  R+WR  L+E+   HK   LL  Y ++ +S  GH+ E+A + S   ++ V  GV+ +  + +P+A+   +    A LK++CC +++ + ++Q++L  ++ KL L++ DA   ++  +            R +R +L     E  E      GA        R R+++                        +   +  D ++ +    + ++++A  L              KE +T     P                   +A +R P+       +L  L+  +F+P D + +     +   +LA A++  +D         GS D+ E D     +    L +ASA+   +  + +NM  SG+   L  ++   PVV+MG LHWL V +  P   +S   +      +R+L+  +       P  F  L   L L P  +    +++KR+ L+C VF+++ G+VLPV+ F   N  E+D AL+R+F+ +      PP+S  F+ AL  +L    V  A++S   E+
Sbjct:  287 IANKGASWD-PAEEILYSHLKDMVDENYDPKLVSNVLSGSAVEPEWLTQMLSDRKWRLMLIELAETHKTCTLLQ-YAIRRISEAGHHKEIASITSANAFFPVFSGVLVDAFSRIPFANEEEMVEDIAALKKVCCQSSHSYVYAQELLCSMDDKLYLMQKDADATSAEYT----------HIRMVRSKLNRVHGELQETASTRFGAKIVPFHILRRRYIY------------------------DANTKFCDAILSIVKTKKCSELSAEALA-------------KEYQTSKTPPP-------------------VAHLRDPM-------VLSSLLDRLFNPSDSI-SPAFVQNCVFLLAYAASTKDDRSLLQTGVQGSSDQVEVDDDGVESTKKALVEASAICKSDHTIGYNMNQSGVVDKLISVMSV-PVVSMGVLHWLEVILTSPGLFSSTPLHICFPSLLRILKASIKLHVAQWPISFGVLVTSLRLHPDVNPVKALELKRETLRCMVFMITSGYVLPVLEFVFTNTLELDQALLRNFITMLFARIAPPFSPKFSVALTKILTHPKVQTAIKSCPPES 790          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|325179653|emb|CCA14051.1| (negative elongation factor putative [Albugo laibachii Nc14])

HSP 1 Score: 150.984 bits (380), Expect = 2.155e-34
Identity = 141/612 (23.04%), Postives = 259/612 (42.32%), Query Frame = 0
Query:   26 GQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEAAEQGIGAAGASQGGSWYNRCRFVHRLSAWQAEAPPLNLTEEDDPMEAVEKRRRVVDMLVVLFSEGRLTDVAAATLLETYVDANILFTERKEARTGAGEIPGSTTGEEGEEGEEDEDGHDIAQIRGPLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVAS--------TALEDG---------SVDREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLRAHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHV-FMRLLQFLVLERPLH--HPAI-FEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTEAKSNGDYKQLQDIPGLSD 616
             ++++   L   I   ++ +    +L G   +  ++  M+  ++WRR L+++   HK   LL  Y ++ +S  G++ E+A L +   ++ V  GV+ + L  +       +++   NL+RICC + Y + +++++L  L+ KL            +    G   A      +R  L    +E         GA     +  R R+++                        ++     D ++ +F   + ++ AA  L+E Y  +N                                          P   LR P +L  L+  +F+P     T  ++     +  VAS        +  +DG          +  +E + +   L  ASA+   ++ L +NM  SG+   L  ++   PVV++G L+WL + ++   F  S     ++H+ F  LLQ L     LH  H AI    L   LTL+       I++++R++L+C VF+++ G+V PV+ F  +N+ E+D AL+RHF+ + L +  PPYS+ F  AL+S++    V  A+ S  D+   +A ++     C    EA+ N   +QL   P   D
Sbjct:  291 AEDVLYMRLEDLIMQNYNPNMVSDVLSGSTTEPEWLTAMLKDKKWRRMLVKLAEAHKTCTLLQ-YAIRRISEAGYHQEVASLPTANAFFPVFNGVLIDSLKRISTDSEEEMAKNITNLQRICCQSEYSYFYAEELLSHLDDKLF----------QLQMHPGCKNA-AFIDHVRIRLHRMGYEIQNAATNKVGAKIEPFYPLRRRYIY------------------------DRHTLFCDAVLSIFKTKKCSEQAAQALVEQYKGSN----------------------------------------PPPAIHLRTP-VLYGLIDPLFNPSTSATTPFKQNCITLLAYVASVRDNRSVLSPCQDGDRQEKNLVGQIGEDEMENIACVLADASAICKSDKTLGYNMNQSGIVQRLISMIET-PVVSIGVLYWLEMILESSSFVGS----TLLHICFPSLLQILKASIRLHKLHWAIALRILITFLTLETENDPVKILELRRESLRCMVFMITAGYVFPVLDFITKNVLELDQALLRHFVTVLLSSIAPPYSTRFLSALSSIIIHPKVQSAIASGSDDC--KARLRAFALYC----EARGNCLPEQLHSSPASQD 814          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|698796530|ref|XP_009831294.1| (hypothetical protein H257_07454 [Aphanomyces astaci] >gi|574113964|gb|ETV79453.1| hypothetical protein H257_07454 [Aphanomyces astaci])

HSP 1 Score: 130.568 bits (327), Expect = 9.283e-28
Identity = 86/279 (30.82%), Postives = 140/279 (50.18%), Query Frame = 0
Query:  334 PLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVAST----------ALEDGSVDREEAD--ALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLR--AHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCENDTE 598
            P+A +R   +L  L  A+F P + +++   R S   VLA A+T            +D ++  +EA    +   L  AS +   E  L +NM  S     +  L+R  A PVV+MG LHWL++ +    F+N   F+    V M LL+  +       P +F+ L   + L+P  +   +++ K++ L+C V LM+ G++ PV+ F      ++D AL+RHF+ L L+   PPYS  F   L+ +L    VS+ALR+   E   +A +K    VC+ + E
Sbjct:  540 PVAHIREHVILRRLTTALFHPYEAVESAGHRTSCAFVLAYAATVQDTRPLLATTTDDQAMSWDEAQVHTIAAALEAASTVCKSETTLSYNMNESD---AVDKLVRSMAIPVVSMGILHWLQLLVASKTFYNGPFFHAAFPVVMSLLRQAIALHVGQWPTVFQVLVTSVRLQPESNPVKVLETKKETLRCMVHLMTCGYIFPVLHFIATQTDDLDQALLRHFIQLVLMRIAPPYSLRFTTVLSDILLHPKVSQALRTCPVET--KAKLKEFAHVCQAEDE 813          

HSP 2 Score: 79.337 bits (194), Expect = 1.106e-11
Identity = 60/213 (28.17%), Postives = 101/213 (47.42%), Query Frame = 0
Query:    2 ANMALLVGKWLQE-LGGDGAEPDMD---GQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWA--DHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQELESAAWEA 208
            A M  LVG WL   +    + PD D      L+   L+  I  R+D      +L     +  +++ M+  R+WR  L+E+  +HK   LL  Y ++ +S  GH+ E+A + +  D + V   VV ++L  +P+A  D V    L+  L++IC  +AY + ++Q VL  L+  L         TS++     ++    +  R+RQ L  A   A
Sbjct:  287 AQMCRLVGTWLDAAIPPTTSRPDDDDVSADSLMFHTLKAAIVDRYDPKLLSNVLSDSIAEPDWLNTMLHDRKWRLMLIELAEKHKTCSLLQ-YAIRRISEAGHHKEIASISTASDVFPVFNAVVADILKRIPFAGVDDVREDYLA--LQKICMHSAYSYIYTQQVLLQLDQTL--------STSSVH----VLPYRSKLERLRQTLHEAVLTA 484          
BLAST of EWM26599.1 vs. NCBI_GenBank
Match: gi|673034620|ref|XP_008871271.1| (hypothetical protein H310_07637 [Aphanomyces invadans] >gi|574473242|gb|ETW00246.1| hypothetical protein H310_07637 [Aphanomyces invadans])

HSP 1 Score: 126.716 bits (317), Expect = 1.636e-26
Identity = 83/274 (30.29%), Postives = 135/274 (49.27%), Query Frame = 0
Query:  334 PLAFLRHPRLLEVLVRAIFDPKDRLDTETRRASACQVLAVASTALEDGSV-----------DREEADALYGGLRQASALLADEEMLRWNMCTSGMPPVLKGLLR--AHPVVAMGFLHWLRVTIQDPEFHNSRQFNEVMHVFMRLLQFLVLERPLHHPAIFEALEALLTLKPTESSFNIIKMKRQALQCCVFLMSHGFVLPVVAFFHENLAEMDHALVRHFLGLTLVAAQPPYSSVFACALASLLRETVVSKALRSSLDEAPKRALVKFIETVCE 594
            P+A LR   +L+ L  A+F P + ++    R +   VLA A+T  +   +             E    +   L  AS +   E  L +NM  S     +  L+R  A PVV+MG LHWL++ +    F+N   F+    V + LL+  +       P +F+ L   + L+P  +   +++ K++ L+C V LM+ G++ PV+ F      ++D AL+R+F+ L L    PPYS  F  AL+ +L    VS+ALR+   E  K  L +F+  VC+
Sbjct:  553 PVAHLREHVILQRLTTALFHPYEAMENAAHRTACAFVLAYAATVQDPRPLLATTTTDTLEWSDEHVQGIAAALEAASIVCKSETTLSYNMNESD---AVDKLVRSMAIPVVSMGILHWLQLLLASKTFYNGPFFHAAFPVLLNLLRQAISLHVAQWPTVFQVLVTAVRLQPESNPVKVLETKKETLRCLVHLMTCGYIFPVLHFIATQTDDLDQALLRNFIQLVLARIAPPYSLRFTTALSRILVHPKVSQALRTCPAET-KTKLKEFVH-VCQ 821          

HSP 2 Score: 73.9442 bits (180), Expect = 5.037e-10
Identity = 54/215 (25.12%), Postives = 95/215 (44.19%), Query Frame = 0
Query:    2 ANMALLVGKWLQELGGDGAEP---------------DMDGQELVLEHLRGEIKGRFDVDKADALLFGRKQDMVFIDDMMGYRRWRRTLMEIFAQHKESKLLGGYCMQHLSRTGHNTEMADLVSVEDYWSVARGVVTELLAEVPWADHVHLSRLSANLKRICCSTAYLHAFSQDVLWGLESKLLVRADASRDTSNISTAQGLMAANRRFRRIRQEL 201
            A M  L+G WL     D + P               D+D   L+   L+  I  R+D      +L     +  +++ M+  R+WR  L+E+  +HK   LL  Y ++ +S  GH+ E+A + +  D + V   +V ++L  +P+A    +      L++IC   AYL+ ++Q+ L  L   L       +D +       +  A  +  R+RQ L
Sbjct:  295 AQMCRLLGSWL-----DASIPETKSSRMSLAKTPDNDVDADTLIFHALKQAIMDRYDPKLLSNVLSDSIAEPEWLNTMLHDRKWRLMLIELAEKHKTCSLLQ-YAIRRISEAGHHKEIASITNANDVFPVFNAIVADILKRIPFAGVDDVREDYRALEKICAHAAYLYMYTQEALLVLNEAL------CKDPT-------MQPARSKLERLRQSL 490          
The following BLAST results are available for this feature:
BLAST of EWM26599.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108687|gb|EWM26599.1|0.000e+0100.00th1-like protein [Nannochloropsis gaditana][more]
gi|953491703|emb|CEG45712.1|9.214e-4624.19th1 family protein [Plasmopara halstedii][more]
gi|566033416|gb|ETI56327.1|1.339e-4224.19hypothetical protein F443_01077 [Phytophthora para... [more]
gi|567971139|gb|ETK96152.1|1.357e-4224.19hypothetical protein L915_01016 [Phytophthora para... [more]
gi|675163703|ref|XP_008890736.1|1.364e-4224.19hypothetical protein PPTG_00914 [Phytophthora para... [more]
gi|695404971|ref|XP_009523672.1|1.640e-4124.37hypothetical protein PHYSODRAFT_497217 [Phytophtho... [more]
gi|301121290|ref|XP_002908372.1|3.107e-4023.24negative elongation factor, putative [Phytophthora... [more]
gi|325179653|emb|CCA14051.1|2.155e-3423.04negative elongation factor putative [Albugo laibac... [more]
gi|698796530|ref|XP_009831294.1|9.283e-2830.82hypothetical protein H257_07454 [Aphanomyces astac... [more]
gi|673034620|ref|XP_008871271.1|1.636e-2630.29hypothetical protein H310_07637 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3921rna3921Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications