EWM26826.1, cds3874 (CDS) Nannochloropsis gaditana

Overview
NameEWM26826.1
Unique Namecds3874
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:318045..318180 -
Alignment locationCM002462.1:317824..317990 -
Alignment locationCM002462.1:317660..317782 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26826.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100018g21.2806.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:318045..318180 -
CM002462.1supercontigCM002462.1:317824..317990 -
CM002462.1supercontigCM002462.1:317660..317782 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26826.1 vs. NCBI_GenBank
Match: gi|585108917|gb|EWM26826.1| (hypothetical protein Naga_100018g21 [Nannochloropsis gaditana])

HSP 1 Score: 288.5 bits (737), Expect = 1.044e-98
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0 
Query:    1 MYSILGVMIKTCIVHLSAKHFRAGSLCCGSAYHVEILAFQRSMALKINLFFTFQNGASFFGLKTRLPKVKDVIVNSEAYHLVILLKKRVKKKTEKFLLRFFIEGLHIDTKGFENKFHAQACWLLLLTHYVDSHKAACDYFH 141
            MYSILGVMIKTCIVHLSAKHFRAGSLCCGSAYHVEILAFQRSMALKINLFFTFQNGASFFGLKTRLPKVKDVIVNSEAYHLVILLKKRVKKKTEKFLLRFFIEGLHIDTKGFENKFHAQACWLLLLTHYVDSHKAACDYFH
Sbjct:    1 MYSILGVMIKTCIVHLSAKHFRAGSLCCGSAYHVEILAFQRSMALKINLFFTFQNGASFFGLKTRLPKVKDVIVNSEAYHLVILLKKRVKKKTEKFLLRFFIEGLHIDTKGFENKFHAQACWLLLLTHYVDSHKAACDYFH 141
The following BLAST results are available for this feature:
BLAST of EWM26826.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108917|gb|EWM26826.1|1.044e-98100.00hypothetical protein Naga_100018g21 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3883rna3883Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications