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Properties
Property Name | Value |
Product | tbc1 domain family member 23 |
Orig transcript id | gnl|cribi|Naga_100018g50.2814.mrna |
Orig protein id | gnl|cribi|Naga_100018g50.2814 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002462.1 | supercontig | CM002462.1:252819..256442 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3857 ID=rna3857|Name=rna3857|organism=Nannochloropsis gaditana|type=mRNA|length=1401bp ATGGACACTGCACCCTTGGATCCGACCGCTGCCTCTGGTTTTTTGCTTGC TGCCCGTGGCGCGGCGTCAGGTGGGCCGGGATTGCCCCGCGCGCCTGGAG GCACCGTTGGGCAATCGCGTGTAAAAGGCTCCCAAGGAGCGACTCGAAGT GCTGGCAGTTTTGGATTTGGTGCCCCGAATCTCAAGAGTAGCAATCGCGG TGTGGAGGAACAAAAGGTGTTCACGAAAGAGAAAAGCAGCCGTTCCAGCA GCCAGCTCTCGGACTCGGACGATGGTATGGAAAGGGAAGAGCGACAGCTC CAGGAGCAGGTCAGCACCCTCAAACGACAACTCCGTCGCAGCGTCCCATC TGTGCCTTGGACTGGGACTATTTCCCCGACAAATCTGCCTTCCGAGAGAG TCCTGAACAAGGGAATAGCGACATCTCATGCGCCTATGCCGGGGGCGCTT CCTTCCCCGTTTGTAGCCTCCGCTTCTGTCGCTTCAGAGTCCCCTGAGAC TTTCTGTGATGACTATCAAAAGCCTGTTATTTCTACCGAAAATGAAGGAA AGGGTGGCGGCGACAAATCAGAGAGCCACAAGCTGTCGCTGAAGCAGGAC AAAGACCCGGGTCGGGATGACAGCTCTGTGACAGTCGCCAGCGCCAGCAG CACCAACCATGGCGACCCCTGCGACGAGCGAGGAGGACACGAGACGGGCA TGATGGGCATGATGGGTCGCGCGGGTTTTGTCATGAAATGGGGTGAAGTT TCCCCCGTCCGTATTTTGGCTTGTGCCACGGAAGCGGCGAAACGGGCGTG GAAGAGGCAACCAGTTGCTGTCTTCATGTGTGGGCTGGTCATGGTCCTCC TCCTGGGAGGACTGGGAGGCATCCTCTGGGCCCGCTCCATGGAGTCCAGA GCAATTTTTCAAAAGCAGGGGCTCGAAGCGGAGAGGAACGCGGTGCTCTT CACAACCCGAGAGGTGGAAGATTTCCTGCAGAGGGAGCATCAGAAATGGG AAATGCAGTTATATCGCCAGCTTCAGCAACAAGAGCAGGCAAGGCAAGCG CAGCGACAAAACCACGAGCACGCCAGGAAAGGCTTCGATTCAAAACATGA ATCAAGCAAAGACGACATTGCAGACAAAACTTTCGAGGATGGGGAGAGTC TTACCACGGATAAGAAGAGACGAGAGGCGGCGGGCACGGGGGCAGACATG GCCATGGTTCTTCATCCTGGAGCATGTCCGTGCGACGGCATTCCTCTGTT CAAGATTGTGTGGGGCCGGCTGGCGAGAACACTGGGGAGACTGCGAGGTT CCATCGACTCACCAGCAGGTATCGATAACCTATTCCTATGGACGGATTCT TGTATATTGCACGCGGTGGGGGCTCCTGGAGAGTGTTACAACAGTGATTA A back to topprotein sequence of rna3857 >rna3857-protein ID=rna3857-protein|Name=rna3857|organism=Nannochloropsis gaditana|type=polypeptide|length=1207bp MFYCKNFRVDFQPEMAAAYGALLVVLGWEGGDEGGLPSNAEVVGRFHAFC TWLLPHLTLPSWSRDGHLQRVHAAFRLLLNYHAPLLVQHLDRGRAGWEAP PARCGGEGSSSQSWGTQEQARQEAEVEGMVGALEGRWAKSRDAGRCGRQP GVVPGSGRGTSIVEVERMKVASREKKDAANDGDSNHPVASLQEGPSPSTK AGREGHGSSGDSGGIVPSSWLMGHCLGSPLLAPPCQPSLTSPASSAAPPH AEETGKSRDDEDALLALVEACLLRGDRFYGLFLTTALFLRHKTEILCLQG SALRLYLEELVAGGKGIAQCYQPSLSGTPSTMTSTSASSTAVARWMEEAA RVDRSTPISFRVNLTASELLSREKAASLLGSPGSVPEYSPRAEAADTTAT TATAIPAGADATSPQGPEGAMIGLQKGIGAEHPPSACTQEQRAYDVDLSS LTLPLQRLIDALSPRVTDTACPSPSTPSSVGSMGPLPSRRSDQGQNVDTV TLGSFRWALGGPAREERQLRQARDDADLMALLTTQLCLTVTPEEAVHALC LPSQSRPNACVRRDAHSEAASSGVTACSTDLGAHSIPSHDGSEDPAAFPV DRLSSLRYLALDCRPKEHVAMGRFPTAYHVDPSRLDDPEEITRLLATLEP FKGSRHLLLMGTGASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDM GHLHTAALFLLKQGFPYVSLLQGGFAAIHAFLLMKTRESSRASSAGSARS PLTLAALIDHVPSQCRMCKHEALLRFHKASGSSSLPLSPSPPAKASPGSS STGPRFSRPLSFGGHAGPAFGKGTSGETASLAALSQLGQSSLDVLRSRAT GLFGKLQAQGQAHGGEEGKEGGGLPQQLETVHDMGNFLKGTMVSLGKRAE QAVQEARSKAQGAGTGASGGGGGGEGGGQPAATPFPRFSSANRSTNEWAG HHQVASSSDSAQGSVQTGAPRSQQGGEGGTFLSAYENKHSAVFVIEDDEG EDMDEVSPKQKGCPLSGGKRALESGLLFPAQACASMSPTLAQKTQTNDLD RELALKQHALNGLQKGGEVSISPEALPGAQLFSVYKLKKGARSPSSSSPT SAPELARYIVLTPERIIVLEEAGRKARKAGQGRVKSNHHLTELARMTFMK REPDIVTLYFRNPECQAGTEDTEAGPQKKENLKGRAYRIGQKEEFIAALQ LRLQRFK back to topmRNA from alignment at CM002462.1:252819..256442- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3857 ID=rna3857|Name=rna3857|organism=Nannochloropsis gaditana|type=mRNA|length=3624bp|location=Sequence derived from alignment at CM002462.1:252819..256442- (Nannochloropsis gaditana) ATGTTCTATTGCAAGAACTTCCGCGTTGATTTCCAACCTGAAATGGCGGC
CGCATACGGAGCACTGCTGGTGGTGCTGGGTTGGGAAGGCGGGGACGAAG
GCGGGCTTCCCAGTAATGCGGAGGTCGTGGGGCGGTTCCACGCCTTCTGC
ACCTGGCTCCTCCCTCATCTGACGCTGCCGTCGTGGAGCCGCGACGGCCA
CCTCCAGCGCGTGCACGCCGCGTTTCGACTGCTCTTGAACTACCACGCCC
CGCTTTTGGTCCAGCATTTGGACAGGGGCAGGGCCGGGTGGGAAGCCCCT
CCGGCTCGGTGCGGAGGGGAGGGGTCCTCGTCTCAGTCGTGGGGAACACA
GGAACAGGCGCGGCAGGAGGCGGAGGTGGAAGGGATGGTGGGGGCGTTGG
AAGGACGGTGGGCGAAGAGCCGTGACGCTGGGAGATGCGGGCGGCAGCCA
GGGGTGGTTCCGGGCTCCGGCCGGGGAACAAGCATAGTGGAGGTGGAGAG
GATGAAAGTTGCTTCGAGGGAGAAGAAGGATGCTGCCAATGACGGGGACA
GCAACCATCCTGTGGCCTCCCTGCAAGAAGGCCCTTCTCCGTCCACGAAG
GCCGGCCGCGAGGGTCACGGGAGCAGTGGCGACAGCGGAGGCATCGTTCC
TAGCTCCTGGTTAATGGGCCACTGCCTTGGGTCCCCCCTCCTCGCTCCGC
CTTGCCAACCGTCCTTGACATCTCCCGCGTCATCCGCCGCGCCACCGCAT
GCGGAGGAGACAGGAAAGAGCCGGGACGACGAGGACGCCCTCCTGGCTCT
GGTGGAGGCTTGCCTCCTGCGTGGAGACCGTTTCTATGGCCTTTTCCTCA
CGACCGCCCTCTTTCTTCGACATAAGACTGAGATTTTGTGCCTGCAAGGA
TCTGCTCTGCGCTTATACCTGGAGGAACTTGTGGCGGGGGGGAAGGGCAT
CGCGCAGTGTTACCAGCCGTCTTTGTCCGGCACTCCCTCTACCATGACCT
CGACCTCTGCCTCTTCGACGGCTGTGGCCAGGTGGATGGAGGAGGCTGCT
CGAGTGGACCGAAGCACGCCTATCTCCTTTCGGGTGAATCTGACAGCATC
GGAATTGTTGAGTCGGGAGAAGGCTGCTTCGTTGCTCGGTAGCCCGGGTT
CTGTGCCGGAATATTCTCCCCGTGCAGAAGCAGCAGATACAACAGCAACG
ACAGCAACAGCCATACCCGCAGGAGCAGATGCGACATCGCCCCAAGGGCC
TGAAGGGGCCATGATAGGATTGCAGAAGGGCATCGGTGCTGAACATCCTC
CCTCTGCGTGCACCCAGGAGCAGCGTGCCTACGATGTTGATCTCTCCTCC
CTCACGCTTCCCCTCCAGCGGTTAATCGACGCTCTGAGCCCAAGAGTCAC
CGACACGGCTTGTCCTTCACCCTCCACGCCCTCCTCGGTTGGCAGCATGG
GTCCTCTTCCGAGCAGAAGAAGCGACCAGGGGCAAAACGTGGATACCGTC
ACCCTCGGGAGCTTCCGATGGGCTTTGGGTGGGCCGGCGCGGGAGGAGCG
GCAGCTGCGACAGGCACGGGACGATGCGGACTTGATGGCCCTGCTGACCA
CTCAACTGTGTCTCACGGTCACACCGGAAGAGGCGGTCCACGCCCTGTGC
CTGCCCAGTCAAAGTAGGCCAAACGCCTGTGTCAGACGGGACGCGCATAG
TGAGGCTGCTAGCAGCGGCGTTACCGCCTGTTCCACCGATTTGGGCGCCC
ACTCTATTCCTAGCCACGACGGCAGTGAAGATCCTGCCGCTTTCCCCGTC
GACAGGTTGAGCTCGTTGCGTTACCTGGCCTTGGACTGCCGGCCTAAGGA
GCACGTGGCAATGGGACGCTTCCCCACTGCCTACCACGTGGACCCAAGCC
GACTGGACGACCCAGAGGAAATCACGCGGTTGCTCGCCACGCTGGAGCCC
TTCAAGGGGTCGAGACACCTGCTTTTAATGGGCACGGGAGCCAGTGGGGG
CGGCCTGGCGCCGGCAGTCCCCAAAGAGGGGGGGGGGAAAGGCGCGACAC
CGGCGCAGCGATTCAAGGAGCACATGGCCTTGGCCGAACGCCAAGATATG
GGCCACCTTCACACCGCGGCCCTTTTTTTGTTGAAACAGGGCTTTCCCTA
CGTCAGTCTCTTGCAGGGAGGGTTTGCAGCCATCCATGCCTTCTTATTGA
TGAAGACCAGAGAATCATCCAGGGCGTCTTCTGCCGGGTCTGCCCGTTCG
CCCCTGACTTTGGCCGCCTTGATCGACCACGTGCCCAGTCAATGTCGGAT
GTGCAAACACGAAGCTCTCCTGCGGTTCCACAAGGCCTCCGGGTCGTCCA
GCTTACCCCTGTCTCCTTCCCCCCCTGCCAAAGCCTCCCCGGGGAGCTCC
TCCACCGGTCCGCGTTTCAGTCGTCCCTTGTCTTTTGGCGGGCACGCAGG
CCCTGCCTTTGGAAAAGGAACGAGTGGGGAGACAGCTTCCCTCGCGGCTT
TGTCTCAGCTGGGGCAATCGTCTTTGGACGTGCTCCGTTCGCGTGCTACT
GGCCTGTTTGGGAAGCTGCAAGCCCAGGGCCAGGCACACGGAGGGGAGGA
AGGGAAGGAAGGGGGAGGATTGCCGCAGCAGCTCGAAACGGTGCATGACA
TGGGAAATTTTCTGAAGGGCACCATGGTTAGCCTGGGTAAACGTGCTGAG
CAAGCTGTGCAAGAGGCAAGATCCAAGGCCCAGGGGGCGGGGACGGGGGC
TTCTGGTGGAGGAGGAGGGGGAGAGGGGGGGGGTCAACCAGCGGCAACAC
CTTTTCCCAGGTTTTCGAGTGCCAATCGATCTACCAATGAATGGGCTGGG
CACCACCAGGTAGCTTCTTCAAGTGACTCGGCCCAAGGAAGTGTGCAGAC
AGGCGCCCCCCGGTCCCAGCAGGGAGGGGAGGGAGGCACGTTCCTCTCTG
CTTATGAAAACAAGCACTCCGCTGTTTTTGTGATTGAGGATGACGAAGGG
GAAGACATGGATGAAGTGTCGCCTAAACAAAAGGGCTGCCCTCTGTCTGG
CGGAAAGAGGGCGCTTGAAAGTGGACTGCTTTTCCCTGCACAGGCGTGCG
CTTCGATGAGTCCGACCCTGGCACAGAAGACTCAGACCAATGATCTAGAT
CGAGAGCTCGCATTGAAACAGCACGCGTTGAATGGGCTTCAGAAAGGAGG
AGAGGTGTCCATATCCCCCGAGGCCCTTCCCGGTGCTCAGCTTTTTTCTG
TCTACAAACTTAAGAAGGGAGCGAGGTCTCCCTCGTCTTCCTCCCCCACA
TCGGCCCCGGAATTAGCACGGTATATTGTGTTGACGCCAGAGAGAATCAT
TGTGCTCGAAGAAGCTGGGAGAAAGGCTAGAAAGGCGGGCCAGGGCAGGG
TGAAATCAAATCATCATTTGACCGAGTTGGCCCGCATGACTTTCATGAAA
CGCGAACCTGACATCGTCACGCTCTACTTTCGGAACCCAGAGTGCCAGGC
AGGGACGGAAGACACGGAGGCTGGCCCGCAAAAAAAGGAGAATTTGAAAG
GACGGGCCTATCGGATCGGACAAAAGGAAGAATTTATTGCGGCGTTGCAG
TTGCGACTGCAGCGATTTAAATGA back to topCoding sequence (CDS) from alignment at CM002462.1:252819..256442- >rna3857 ID=rna3857|Name=rna3857|organism=Nannochloropsis gaditana|type=CDS|length=3624bp|location=Sequence derived from alignment at CM002462.1:252819..256442- (Nannochloropsis gaditana) ATGTTCTATTGCAAGAACTTCCGCGTTGATTTCCAACCTGAAATGGCGGC CGCATACGGAGCACTGCTGGTGGTGCTGGGTTGGGAAGGCGGGGACGAAG GCGGGCTTCCCAGTAATGCGGAGGTCGTGGGGCGGTTCCACGCCTTCTGC ACCTGGCTCCTCCCTCATCTGACGCTGCCGTCGTGGAGCCGCGACGGCCA CCTCCAGCGCGTGCACGCCGCGTTTCGACTGCTCTTGAACTACCACGCCC CGCTTTTGGTCCAGCATTTGGACAGGGGCAGGGCCGGGTGGGAAGCCCCT CCGGCTCGGTGCGGAGGGGAGGGGTCCTCGTCTCAGTCGTGGGGAACACA GGAACAGGCGCGGCAGGAGGCGGAGGTGGAAGGGATGGTGGGGGCGTTGG AAGGACGGTGGGCGAAGAGCCGTGACGCTGGGAGATGCGGGCGGCAGCCA GGGGTGGTTCCGGGCTCCGGCCGGGGAACAAGCATAGTGGAGGTGGAGAG GATGAAAGTTGCTTCGAGGGAGAAGAAGGATGCTGCCAATGACGGGGACA GCAACCATCCTGTGGCCTCCCTGCAAGAAGGCCCTTCTCCGTCCACGAAG GCCGGCCGCGAGGGTCACGGGAGCAGTGGCGACAGCGGAGGCATCGTTCC TAGCTCCTGGTTAATGGGCCACTGCCTTGGGTCCCCCCTCCTCGCTCCGC CTTGCCAACCGTCCTTGACATCTCCCGCGTCATCCGCCGCGCCACCGCAT GCGGAGGAGACAGGAAAGAGCCGGGACGACGAGGACGCCCTCCTGGCTCT GGTGGAGGCTTGCCTCCTGCGTGGAGACCGTTTCTATGGCCTTTTCCTCA CGACCGCCCTCTTTCTTCGACATAAGACTGAGATTTTGTGCCTGCAAGGA TCTGCTCTGCGCTTATACCTGGAGGAACTTGTGGCGGGGGGGAAGGGCAT CGCGCAGTGTTACCAGCCGTCTTTGTCCGGCACTCCCTCTACCATGACCT CGACCTCTGCCTCTTCGACGGCTGTGGCCAGGTGGATGGAGGAGGCTGCT CGAGTGGACCGAAGCACGCCTATCTCCTTTCGGGTGAATCTGACAGCATC GGAATTGTTGAGTCGGGAGAAGGCTGCTTCGTTGCTCGGTAGCCCGGGTT CTGTGCCGGAATATTCTCCCCGTGCAGAAGCAGCAGATACAACAGCAACG ACAGCAACAGCCATACCCGCAGGAGCAGATGCGACATCGCCCCAAGGGCC TGAAGGGGCCATGATAGGATTGCAGAAGGGCATCGGTGCTGAACATCCTC CCTCTGCGTGCACCCAGGAGCAGCGTGCCTACGATGTTGATCTCTCCTCC CTCACGCTTCCCCTCCAGCGGTTAATCGACGCTCTGAGCCCAAGAGTCAC CGACACGGCTTGTCCTTCACCCTCCACGCCCTCCTCGGTTGGCAGCATGG GTCCTCTTCCGAGCAGAAGAAGCGACCAGGGGCAAAACGTGGATACCGTC ACCCTCGGGAGCTTCCGATGGGCTTTGGGTGGGCCGGCGCGGGAGGAGCG GCAGCTGCGACAGGCACGGGACGATGCGGACTTGATGGCCCTGCTGACCA CTCAACTGTGTCTCACGGTCACACCGGAAGAGGCGGTCCACGCCCTGTGC CTGCCCAGTCAAAGTAGGCCAAACGCCTGTGTCAGACGGGACGCGCATAG TGAGGCTGCTAGCAGCGGCGTTACCGCCTGTTCCACCGATTTGGGCGCCC ACTCTATTCCTAGCCACGACGGCAGTGAAGATCCTGCCGCTTTCCCCGTC GACAGGTTGAGCTCGTTGCGTTACCTGGCCTTGGACTGCCGGCCTAAGGA GCACGTGGCAATGGGACGCTTCCCCACTGCCTACCACGTGGACCCAAGCC GACTGGACGACCCAGAGGAAATCACGCGGTTGCTCGCCACGCTGGAGCCC TTCAAGGGGTCGAGACACCTGCTTTTAATGGGCACGGGAGCCAGTGGGGG CGGCCTGGCGCCGGCAGTCCCCAAAGAGGGGGGGGGGAAAGGCGCGACAC CGGCGCAGCGATTCAAGGAGCACATGGCCTTGGCCGAACGCCAAGATATG GGCCACCTTCACACCGCGGCCCTTTTTTTGTTGAAACAGGGCTTTCCCTA CGTCAGTCTCTTGCAGGGAGGGTTTGCAGCCATCCATGCCTTCTTATTGA TGAAGACCAGAGAATCATCCAGGGCGTCTTCTGCCGGGTCTGCCCGTTCG CCCCTGACTTTGGCCGCCTTGATCGACCACGTGCCCAGTCAATGTCGGAT GTGCAAACACGAAGCTCTCCTGCGGTTCCACAAGGCCTCCGGGTCGTCCA GCTTACCCCTGTCTCCTTCCCCCCCTGCCAAAGCCTCCCCGGGGAGCTCC TCCACCGGTCCGCGTTTCAGTCGTCCCTTGTCTTTTGGCGGGCACGCAGG CCCTGCCTTTGGAAAAGGAACGAGTGGGGAGACAGCTTCCCTCGCGGCTT TGTCTCAGCTGGGGCAATCGTCTTTGGACGTGCTCCGTTCGCGTGCTACT GGCCTGTTTGGGAAGCTGCAAGCCCAGGGCCAGGCACACGGAGGGGAGGA AGGGAAGGAAGGGGGAGGATTGCCGCAGCAGCTCGAAACGGTGCATGACA TGGGAAATTTTCTGAAGGGCACCATGGTTAGCCTGGGTAAACGTGCTGAG CAAGCTGTGCAAGAGGCAAGATCCAAGGCCCAGGGGGCGGGGACGGGGGC TTCTGGTGGAGGAGGAGGGGGAGAGGGGGGGGGTCAACCAGCGGCAACAC CTTTTCCCAGGTTTTCGAGTGCCAATCGATCTACCAATGAATGGGCTGGG CACCACCAGGTAGCTTCTTCAAGTGACTCGGCCCAAGGAAGTGTGCAGAC AGGCGCCCCCCGGTCCCAGCAGGGAGGGGAGGGAGGCACGTTCCTCTCTG CTTATGAAAACAAGCACTCCGCTGTTTTTGTGATTGAGGATGACGAAGGG GAAGACATGGATGAAGTGTCGCCTAAACAAAAGGGCTGCCCTCTGTCTGG CGGAAAGAGGGCGCTTGAAAGTGGACTGCTTTTCCCTGCACAGGCGTGCG CTTCGATGAGTCCGACCCTGGCACAGAAGACTCAGACCAATGATCTAGAT CGAGAGCTCGCATTGAAACAGCACGCGTTGAATGGGCTTCAGAAAGGAGG AGAGGTGTCCATATCCCCCGAGGCCCTTCCCGGTGCTCAGCTTTTTTCTG TCTACAAACTTAAGAAGGGAGCGAGGTCTCCCTCGTCTTCCTCCCCCACA TCGGCCCCGGAATTAGCACGGTATATTGTGTTGACGCCAGAGAGAATCAT TGTGCTCGAAGAAGCTGGGAGAAAGGCTAGAAAGGCGGGCCAGGGCAGGG TGAAATCAAATCATCATTTGACCGAGTTGGCCCGCATGACTTTCATGAAA CGCGAACCTGACATCGTCACGCTCTACTTTCGGAACCCAGAGTGCCAGGC AGGGACGGAAGACACGGAGGCTGGCCCGCAAAAAAAGGAGAATTTGAAAG GACGGGCCTATCGGATCGGACAAAAGGAAGAATTTATTGCGGCGTTGCAG TTGCGACTGCAGCGATTTAAATGA back to top
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