Naga_100018g50, gene3711 (gene) Nannochloropsis gaditana

Overview
NameNaga_100018g50
Unique Namegene3711
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:252819..256442 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100018g50
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:252819..256442 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G03540NO08G03540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3857rna3857-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3857rna3857Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3857

>rna3857-protein ID=rna3857-protein|Name=rna3857|organism=Nannochloropsis gaditana|type=polypeptide|length=1207bp
MFYCKNFRVDFQPEMAAAYGALLVVLGWEGGDEGGLPSNAEVVGRFHAFC
TWLLPHLTLPSWSRDGHLQRVHAAFRLLLNYHAPLLVQHLDRGRAGWEAP
PARCGGEGSSSQSWGTQEQARQEAEVEGMVGALEGRWAKSRDAGRCGRQP
GVVPGSGRGTSIVEVERMKVASREKKDAANDGDSNHPVASLQEGPSPSTK
AGREGHGSSGDSGGIVPSSWLMGHCLGSPLLAPPCQPSLTSPASSAAPPH
AEETGKSRDDEDALLALVEACLLRGDRFYGLFLTTALFLRHKTEILCLQG
SALRLYLEELVAGGKGIAQCYQPSLSGTPSTMTSTSASSTAVARWMEEAA
RVDRSTPISFRVNLTASELLSREKAASLLGSPGSVPEYSPRAEAADTTAT
TATAIPAGADATSPQGPEGAMIGLQKGIGAEHPPSACTQEQRAYDVDLSS
LTLPLQRLIDALSPRVTDTACPSPSTPSSVGSMGPLPSRRSDQGQNVDTV
TLGSFRWALGGPAREERQLRQARDDADLMALLTTQLCLTVTPEEAVHALC
LPSQSRPNACVRRDAHSEAASSGVTACSTDLGAHSIPSHDGSEDPAAFPV
DRLSSLRYLALDCRPKEHVAMGRFPTAYHVDPSRLDDPEEITRLLATLEP
FKGSRHLLLMGTGASGGGLAPAVPKEGGGKGATPAQRFKEHMALAERQDM
GHLHTAALFLLKQGFPYVSLLQGGFAAIHAFLLMKTRESSRASSAGSARS
PLTLAALIDHVPSQCRMCKHEALLRFHKASGSSSLPLSPSPPAKASPGSS
STGPRFSRPLSFGGHAGPAFGKGTSGETASLAALSQLGQSSLDVLRSRAT
GLFGKLQAQGQAHGGEEGKEGGGLPQQLETVHDMGNFLKGTMVSLGKRAE
QAVQEARSKAQGAGTGASGGGGGGEGGGQPAATPFPRFSSANRSTNEWAG
HHQVASSSDSAQGSVQTGAPRSQQGGEGGTFLSAYENKHSAVFVIEDDEG
EDMDEVSPKQKGCPLSGGKRALESGLLFPAQACASMSPTLAQKTQTNDLD
RELALKQHALNGLQKGGEVSISPEALPGAQLFSVYKLKKGARSPSSSSPT
SAPELARYIVLTPERIIVLEEAGRKARKAGQGRVKSNHHLTELARMTFMK
REPDIVTLYFRNPECQAGTEDTEAGPQKKENLKGRAYRIGQKEEFIAALQ
LRLQRFK
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Synonyms
Publications