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Properties
| Property Name | Value |
|---|
| Product | ribose-5-phosphate isomerase |
| Orig transcript id | gnl|cribi|Naga_100018g63.2772.mrna |
| Orig protein id | gnl|cribi|Naga_100018g63.2772 |
| Gene | RPI |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:199099..202457 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3846 ID=rna3846|Name=rna3846|organism=Nannochloropsis gaditana|type=mRNA|length=2906bp
GTAGGCCGCTGCGTCCATCAATGCCTCGAATTCTGCCTTGTCTGTCACCT
TGAACTTCGTGAACCACGCGTCTGTTTCCGCGGCGTTGTTCACATTCCCG
GGGTCCTCGGAAAGGGACGCATTCGACTCGATGATCTCTCCTGAGACGGG
CGCGTACACGTCGCTGGCGGCCTTGACAGACTCGACGGAGCCAAAGGGGT
CCCTGGAATAGGGGGGTCGAGGGGGGAGACGCGTTGTATTATATATATGC
GGGCTTCAAAGCACCATATTCATGGCGTGTACGTTGATTCGACATGTGGC
GTGTCCAAACGTGTAAAAAGGAAAAGGAAATGCCAGGTAAGCACCCGGAT
AGAAGCGATGGGGTCGCTGAGCGGTCGAAAGATCCTCTTCACACCGCCGT
GCTTACCCTTTACTGAAGGATGCCCCTACTTCCGGCAAGTCCACGTAAAC
CACGTCCCCCAGGGCCTTGGCCGCGAAGTCAGTAATGCCCACAGTGGCGA
TGTCCCCATCCAGCTTCACCCACTCGTGTGACGTTGCGTAGCGTGTGGTT
GCTATCGTACGGCGCAGTGTCGGCTGAAAGACGGTTGACTGGACTCAGAC
AAAGAACAGATGTATGATCGTGGGACATCGAGGAAGGTAAATCAGTAGCA
GATAACGATCGCTTCAACGCATGGCGATCAAGGCGGATTTGTTTCCATGT
AATATGCACAGAATGGGACGAGGCGGCTCACAGAAGGGATTGGCACGTGT
GCTTGATATCATGAAAAGGGAGCTCAAAATCTGAAAACTTACGGAGCAGG
CGATGCGACGAGCTACGTGACGGGTGGCCGTAGCAAGCATTGTGAAATTT
TTTGGAGAGAATGCACGAAAAAGTGCGTCGAAGATCCTGAACGATTTGTG
GTAGGAATACGACATCGTGATATGAGACTGAACATAAGCGAGAGAGGAGC
ACTGCTTCTTTCGTGAGGATCGGGCGACATGAACCACTTTCGTCAGTAAT
AAGTACTGGTGCAGTCCTGTAGTATGAACAGGTGAGGGGTAGATTTTCGA
GAGACCGATGAACAGCCAATTTGTGTGCATTTGCTGAAGTCCTAGAGGCA
CCTTATCGCCGGTCTCATTGCACGCATCGAGCTCGAGAAAAGACTCGTCC
CCACCCCATCCGCCACTCCTTCGCATGACCTCGGACATCACGTCTCCCTG
CCTATCAAACGCCACACGCGTCGCGCCCGTGGCGTGCAGGTACTGGGTAC
CAAGCAATCAGGTTGCACAGCCAGAGAAAGTGACCGCCGGGGGGGGGGAA
GATCGTATGGTAAAGAGCGAGCCAACGGGTTCGGACCACCCCCACGCCAA
ATTTCCTCCGGCCGTGGGCAGGGGGGAATTATTTGGATTGCTGGTGTCCT
GATGATGGATGCTCGGCTTGGTGGTTGATATGATGCGTAGACGCTTTTTA
AGATTGTCTCGTGGGGCAGGATGTTGCTTTGTTTCGGGCACTGGCACTTG
GATTATAATGCCCCGGTCGTTTGCCAATGCAAGTCAGTCAAGGACATCAT
TAACAGCATGATTTTTTTTTATCGCCTTTATTATCCCGCACTCCTAGACC
CTTCATTTACATCTTAACATCTAGAAATGGCCCGCCAAAAGAATATCTTC
TCTGTGATGGCCATGGTCACTGTCGGCGCGTCCGCGTTTATTCTGCCCCT
GAAGCAACCCCTCAACGGCCCAGCCCTATGTGTTCAACGTGCCTCTTCTA
CCGCCCGCTTTGCGGTTAGTCAAGACGAATTGAAGAAGCAAGTGGGCTAC
AAATCGGTGGACGACTACGTGCAGAGTGGAATGGTTGTGGGTTTGGGCAC
TGGCTCCACTGCCGCTTTTGCTGGTAGGTACATGGGGAGGCTGTAGGTAT
CGAAGTAGAAGAGTATAAATGCCGCTATATTCTCATGCCTCTCTGGGACA
TTCTGTCTCCCGCAGTGGAGTGATGGTTCGATAGATCTACGAGGAAAAAC
CCCGCGTGGCAACATGAAGACCACCTTGTCCTTTGAATGGCGCCCTTTGT
CCCTGCCTCGTCGTTTCCCTCCCTCCTTGCTGTCGATCCTACCGCGTCAA
CTTTCCCACAAGAACCCAACGAAAGCCTTCTTTTGATGCTCCTCATTGAC
CATCTTACTTATCCCCCGCCTATTTTCCCCCTTGTCCCATCCATGTCCAA
TTCATGTTCGCCAGTGGAGCGATTGGGCATGAAGCTTAAAGCAGACCCGG
CCCTGAATTTGGTCAAGGGACGTGGAGGGGCCTTATTGCGCGAGAAGATG
GTGGAGGTGTGCGCCAAGAAGTTCATCGTTATCGTGGATGACAGCAAAAT
GGTTCCGGGATTGGGCGTGACGGGAGCCATGCCCGTGGAAATTACCCCTT
TCTGCCATGAACACACTCAACGCACGATTCTGGAGCTCCCGGGGGTCAAG
GGCGCAGCCACAGGGAAGCTGCGCATGGACGGCGACAAGCCCTACGTTAC
GGACAACGACAACTACATTGTGGATTTGTACTACACGGATCCGATCGCGG
ACGTGAAAGCGGTGGCGCGGGCCTTGGAGGGAGTGGTGGGGGTGGTGGAG
CACGGTTTCTTCTTGGACATGACCACCGCGGTGATTGTGGCTGGCAAAGA
GGGAATCGAGGTCATCAACAAGAAGTAAGGAGGGGAAAGGATACTATGGG
GGATATGACGAAGGCTTGATTGAGGGCCTGAAGCCCGAAAAAGGGGTGAA
AGGGCGAAACTTTGCGAGAAAGGAGAAAGTGATGCATGTAATGACGTGGA
ACGGCGGCATCTCGCAGGCCACCTCTCTTCTTGCGATCTTGTTCACCGCA
CACGATGAATGGAAGCAAAACAAAGCGCTAGAAGCGATCATTGGCATCAA
TGTTGG back to topprotein sequence of rna3846 >rna3846-protein ID=rna3846-protein|Name=rna3846|organism=Nannochloropsis gaditana|type=polypeptide|length=236bp
MARQKNIFSVMAMVTVGASAFILPLKQPLNGPALCVQRASSTARFAVSQD
ELKKQVGYKSVDDYVQSGMVVGLGTGSTAAFAVERLGMKLKADPALNLVK
GRGGALLREKMVEVCAKKFIVIVDDSKMVPGLGVTGAMPVEITPFCHEHT
QRTILELPGVKGAATGKLRMDGDKPYVTDNDNYIVDLYYTDPIADVKAVA
RALEGVVGVVEHGFFLDMTTAVIVAGKEGIEVINKK back to topmRNA from alignment at CM002462.1:199099..202457+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3846 ID=rna3846|Name=rna3846|organism=Nannochloropsis gaditana|type=mRNA|length=3359bp|location=Sequence derived from alignment at CM002462.1:199099..202457+ (Nannochloropsis gaditana)
GTAGGCCGCTGCGTCCATCAATGCCTCGAATTCTGCCTTGTCTGTCACCT
TGAACTTCGTGAACCACGCGTCTGTTTCCGCGGCGTTGTTCACATTCCCG
GGGTCCTCGGAAAGGGACGCATTCGACTCGATGATCTCTCCTGAGACGGG
CGCGTACACGTCGCTGGCGGCCTTGACAGACTCGACGGAGCCAAAGGGGT
CCCTGGAATaggggggtcgaggggggagacgcgTTGTATTATATATATGC
GGGCTTCAAAGCACCATATTCATGGCGTGTACGTTGATTCGACATGTGGC
GTGTCCAAACGTgtaaaaaggaaaaggaaatgcCAGGTAAGCACCCGGAT
AGAAGCGATGGGGTCGCTGAGCGGTCGAAAGATCCTCTTCACACCGCCGT
GCTTACCCTTTACTGAAGGATGCCCCTACTTCCGGCAAGTCCACGTAAAC
CACGTCCCccagggccttggccgcgaAGTCAGTAATGCCCACAGTGGCGA
TGTCCCCATCCAGCTTCACCCACTCGTGTGACGTTGCGTAGCGTGTGGTT
GCTATCGTACGGCGCAGTGTCGGCTGAAAGACGGTTGACTGGACTCAGAC
AAAGAACAGATGTATGATCGTGGGACATCGAGGAAGGTAAATCAGTAGCA
GATAACGATCGCTTCAACGCATGGCGATCAAGGCGGATTTGTTTCCATGT
AATATGCACAGAATGGGACGAGGCGGCTCACAGAAGGGATTGGCACGTGT
GCTTGATATCATGAAAAGGGAGCTCAAAATCTGAAAACTTACGGAGCAGG
CGATGCGACGAGCTACGTGACGGGTGGCCGTAGCAAGCATTGTGAAATTT
TTTGGAGAGAATGCACGAAAAAGTGCGTCGAAGATCCTGAACGATTTGTG
GTAGGAATACGACATCGTGATATGAGACTGAACATAAGCGAGAGAGGAGC
ACTGCTTCTTTCGTGAGGATCGGGCGACATGAACCACTTTCGTCAGTAAT
AAGTACTGGTGCAGTCCTGTAGTATGAACAGGTGAGGGGTAGATTTTCGA
GAGACCGATGAACAGCCAATTTGTGTGCATTTGCTGAAGTCCTAGAGGCA
CCTTATCGCCGGTCTCATTGCACGCATCGAGCTCGAGAAAAGACTCGTCC
CCACCCCATCCGCCACTCCTTCGCATGACCTCGGACATCACGTCTCCCTG
CCTATCAAACGCCACACGCGTCGCGCCCGTGGCGTGCAGGTACTGGGTAC
CAAGCAATCAGGTTGCACAGCCAGAGAAAGTGAccgccggggggggggaa
gatcgTATGGTAAAGAGCGAGCCAACGGGTTCGGACCACCCCCACGCCAA
ATTTCCTCCGGCCGTGGGCAGGGGGGAATTATTTGGATTGCTGGTGTCCT
GATGATGGATGCTCGGCTTGGTGGTTGATATGATGCGTAGACGCTTTTTA
AGATTGTCTCGTGGGGCAGGATGTTGCTTTGTTTCGGGCACTGGCACTTG
GATTATAATGCCCCGGTCGTTTGCCAATGCAAGTCAGTCAAGGACATCAT
TAACAGCATGATTTTTTTTTATCGCCTTTATTATCCCGCACTCCTAGACC
CTTCATTTACATCTTAACATCTAGAAATGGCCCGCCAAAAGAATATCTTC
TCTGTGATGGCCATGGTCACTGTCGGCGCGTCCGCGTTTATTCTGCCCCT
GAAGCAACCCCTCAACGGCCCAGCCCTATGTGTTCAACGTGCCTCTTCTA
CCGCCCGCTTTGCGGTTAGTCAAGACGAATTGAAGAAGCAAGTGGGCTAC
AAATCGGTGGACGACTACGTGCAGAGTGGAATGGTTGTGGGTTTGGGCAC
TGGCTCCACTGCCGCTTTTGCTGGTAGGTACATGGGGAGGCTGTAGGTAT
CGAAGTAGAAGAGTATAAATGCCGCTATATTCTCATGCCTCTCTGGGACA
TTCTGTCTCCCGCAGTGGAGTGATGGTTCGATAGATCTACGAGGAAAAAC
CCCGCGTGGCAACATGAAGACCACCTTGTCCTTTGAATGGCGCCCTTTGT
CCCTGCCTcgtcgtttccctccctccttgctgtcGATCCTACCGCGTCAA
CTTTCCCACAAGAACCCAACGAAAGCCTTCTTTTGATGCTCCTCATTGAC
CATCTTACTTATCCCCCGCCtattttcccccttgtcccaTCCATGTCCAA
TTCATGTTCGCCAGTGGAGCGATTGGGCATGAAGCTTAAAGCAGGTGAGT
TAAAGGACATAGTggccatccccacctccatccgAACCAAGGAGCAAGCA
GAGAGTCTGGGCGTTCCCTTGGTGACGCTCGATTCTCACTCCGTCTTGGA
CGTGGCGATTGACGGCGCGGATGAGGTAGACCCGGCCCTGAATTTGGTca
agggacgtggaggggccTTATTGCGCGagaagatggtggaggtAAGCCCG
AGGacagaaagagaggaagacgaagaggggaaaagaagagatgATAGGGT
GGGAGACACGGATacgaaggaagggacatgctagacgaggaagaggaaag
tgaaAGACGGCTTCAGGGGTTGGtagcggggaaggggaggggggcaatgg
aggtcagagaggaggaagggaggaggacgcggaggataGAAGAGATCCTT
GGTCTCTCCGGTCGATACAATATCGTGTATGAAACGACGCCCACCCTCGG
Gcatcctctgcctcctgcccccccaccttccggccctctctcccgtcttc
tccccgcaGGTGTGCGCCAAGAAGTTCATCGTTATCGTGGATGACAGCAA
AATGGTTCCGGGATTGGGCGTGACGGGAGCCATGCCCGTGGAAATTACCC
CTTTCTGCCATGAACACACTCAACGCACGATTCTGGAGCTCCCGGGGGTC
AAGGGCGCAGCCACAGGGAAGCTGCGCATGGACGGCGACAAGCCCTACGT
TACGGACAACGACAACTACATTGTGGATTTGTACTACACGGATCCGATCG
CGGACGTGAAAGCGGTGgcgcgggccttggagggagtggtgggggtggtg
gagcaCGGTTTCTTCTTGGACATGACCACCGCGGTGATTGTGGCTGGCAA
AGAGGGAATCGAGGTCATCAACAAGAagtaaggaggggaaaggatacTAT
GGGGGATATGACGAAGGCTTGATTGAGGGCCTGAAGCCCGAAAAAGGGGT
GAAAGGGCGAAACTTtgcgagaaaggagaaagtgaTGCATGTAATGACGT
GGAACGGCGGCATCTCGCAGGCCACCTCTCTTCTTGCGATCTTGTTCACC
GCACACGATGAATGGAAGCAAAACAAAGCGCTAGAAGCGATCATTGGCAT
CAATGTTGG back to topCoding sequence (CDS) from alignment at CM002462.1:199099..202457+ >rna3846 ID=rna3846|Name=rna3846|organism=Nannochloropsis gaditana|type=CDS|length=2844bp|location=Sequence derived from alignment at CM002462.1:199099..202457+ (Nannochloropsis gaditana)
ATGGCCCGCCAAAAGAATATCTTCTCTGTGATGGCCATGGTCACTGTCGG
CGCGTCCGCGTTTATTCTGCCCCTGAAGCAACCCCTCAACGGCCCAGCCC
TATGTGTTCAACGTGCCTCTTCTACCGCCCGCTTTGCGGTTAGTCAAGAC
GAATTGAAGAAGCAAGTGGGCTACAAATCGGTGGACGACTACGTGCAGAG
TGGAATGGTTGTGGGTTTGGGCACTGGCTCCACTGCCGCTTTTGCTGTGG
AGCGATTGGGCATGAAGCTTAAAGCAGACCCGGCCCTGAATTTGGTcaag
ggacgtggaggggccTTATTGCGCGagaagatggtggagGTGTGCGCCAA
GAAGTTCATCGTTATCGTGGATGACAGCAAAATGGTTCCGGGATTGGGCG
TGACGGGAGCCATGCCCGTGGAAATTACCCCTTTCTGCCATGAACACACT
CAACGCACGATTCTGGAGCTCCCGGGGGTCAAGGGCGCAGCCACAGGGAA
GCTGCGCATGGACGGCGACAAGCCCTACGTTACGGACAACGACAACTACA
TTGTGGATTTGTACTACACGGATCCGATCGCGGACGTGAAAGCGGTGgcg
cgggccttggagggagtggtgggggtggtggagcaCGGTTTCTTCTTGGA
CATGACCACCGCGGTGATTGTGGCTGGCAAAGAGGGAATCGAGGTCATCA
ACAAGAagtaaATGGCCCGCCAAAAGAATATCTTCTCTGTGATGGCCATG
GTCACTGTCGGCGCGTCCGCGTTTATTCTGCCCCTGAAGCAACCCCTCAA
CGGCCCAGCCCTATGTGTTCAACGTGCCTCTTCTACCGCCCGCTTTGCGG
TTAGTCAAGACGAATTGAAGAAGCAAGTGGGCTACAAATCGGTGGACGAC
TACGTGCAGAGTGGAATGGTTGTGGGTTTGGGCACTGGCTCCACTGCCGC
TTTTGCTGTGGAGCGATTGGGCATGAAGCTTAAAGCAGACCCGGCCCTGA
ATTTGGTcaagggacgtggaggggccTTATTGCGCGagaagatggtggag
GTGTGCGCCAAGAAGTTCATCGTTATCGTGGATGACAGCAAAATGGTTCC
GGGATTGGGCGTGACGGGAGCCATGCCCGTGGAAATTACCCCTTTCTGCC
ATGAACACACTCAACGCACGATTCTGGAGCTCCCGGGGGTCAAGGGCGCA
GCCACAGGGAAGCTGCGCATGGACGGCGACAAGCCCTACGTTACGGACAA
CGACAACTACATTGTGGATTTGTACTACACGGATCCGATCGCGGACGTGA
AAGCGGTGgcgcgggccttggagggagtggtgggggtggtggagcaCGGT
TTCTTCTTGGACATGACCACCGCGGTGATTGTGGCTGGCAAAGAGGGAAT
CGAGGTCATCAACAAGAagtaaATGGCCCGCCAAAAGAATATCTTCTCTG
TGATGGCCATGGTCACTGTCGGCGCGTCCGCGTTTATTCTGCCCCTGAAG
CAACCCCTCAACGGCCCAGCCCTATGTGTTCAACGTGCCTCTTCTACCGC
CCGCTTTGCGGTTAGTCAAGACGAATTGAAGAAGCAAGTGGGCTACAAAT
CGGTGGACGACTACGTGCAGAGTGGAATGGTTGTGGGTTTGGGCACTGGC
TCCACTGCCGCTTTTGCTGTGGAGCGATTGGGCATGAAGCTTAAAGCAGA
CCCGGCCCTGAATTTGGTcaagggacgtggaggggccTTATTGCGCGaga
agatggtggagGTGTGCGCCAAGAAGTTCATCGTTATCGTGGATGACAGC
AAAATGGTTCCGGGATTGGGCGTGACGGGAGCCATGCCCGTGGAAATTAC
CCCTTTCTGCCATGAACACACTCAACGCACGATTCTGGAGCTCCCGGGGG
TCAAGGGCGCAGCCACAGGGAAGCTGCGCATGGACGGCGACAAGCCCTAC
GTTACGGACAACGACAACTACATTGTGGATTTGTACTACACGGATCCGAT
CGCGGACGTGAAAGCGGTGgcgcgggccttggagggagtggtgggggtgg
tggagcaCGGTTTCTTCTTGGACATGACCACCGCGGTGATTGTGGCTGGC
AAAGAGGGAATCGAGGTCATCAACAAGAagtaaATGGCCCGCCAAAAGAA
TATCTTCTCTGTGATGGCCATGGTCACTGTCGGCGCGTCCGCGTTTATTC
TGCCCCTGAAGCAACCCCTCAACGGCCCAGCCCTATGTGTTCAACGTGCC
TCTTCTACCGCCCGCTTTGCGGTTAGTCAAGACGAATTGAAGAAGCAAGT
GGGCTACAAATCGGTGGACGACTACGTGCAGAGTGGAATGGTTGTGGGTT
TGGGCACTGGCTCCACTGCCGCTTTTGCTGTGGAGCGATTGGGCATGAAG
CTTAAAGCAGACCCGGCCCTGAATTTGGTcaagggacgtggaggggccTT
ATTGCGCGagaagatggtggagGTGTGCGCCAAGAAGTTCATCGTTATCG
TGGATGACAGCAAAATGGTTCCGGGATTGGGCGTGACGGGAGCCATGCCC
GTGGAAATTACCCCTTTCTGCCATGAACACACTCAACGCACGATTCTGGA
GCTCCCGGGGGTCAAGGGCGCAGCCACAGGGAAGCTGCGCATGGACGGCG
ACAAGCCCTACGTTACGGACAACGACAACTACATTGTGGATTTGTACTAC
ACGGATCCGATCGCGGACGTGAAAGCGGTGgcgcgggccttggagggagt
ggtgggggtggtggagcaCGGTTTCTTCTTGGACATGACCACCGCGGTGA
TTGTGGCTGGCAAAGAGGGAATCGAGGTCATCAACAAGAagtaa back to top
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