EWM26847.1, cds3826 (CDS) Nannochloropsis gaditana

Overview
NameEWM26847.1
Unique Namecds3826
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:173940..175271 -

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Properties
Property NameValue
Protein idEWM26847.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100097g20.3738.mrna
GbkeyCDS
End range.
End range175271
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:173940..175271 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom
Homology
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BLAST of EWM26847.1 vs. NCBI_GenBank
Match: gi|585108942|gb|EWM26847.1| (hypothetical protein Naga_100097g20, partial [Nannochloropsis gaditana])

HSP 1 Score: 884.019 bits (2283), Expect = 0.000e+0
Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0 
Query:    1 GGREGAVGSARKSWGGYHRSVQCSSEERSPHAWLTMYLNSFQVDRASEAKLLLIGWMTAVAVMGAGGVGMWHWITGCNRGLNKQLVTILDRARVVAPRLALSTSARSLGGRHVGTGGGEGRDRGEEREGNRRGALSLVGERSSSLGQSGRPSMSGQPLMDAGPRHATPKSAPVVLKSVANQPLWEGQVGPRGNKAGKAVGGGQGAWLVAHGERDGTRTGPGGERRAGLGLDSSPSSASSLPPDGTAAIPPASPLSSLGTEVTSKEGAREEDAMTQNTPRGAGNAEIIAGHTTAADPARRLSTSAGVKFQPPAFYGRVVEPDYERDMGQKTLERGLVKSGMVQEKRPSGTGWARRKCWKDVYLVVDAGAVTVYRQRADSSVVLHRLPVAEVGTRKIVGGDKQDAGMILTCGGESVELQCPAGEGEVDKWLSVLQWNAEVALRRA 443
            GGREGAVGSARKSWGGYHRSVQCSSEERSPHAWLTMYLNSFQVDRASEAKLLLIGWMTAVAVMGAGGVGMWHWITGCNRGLNKQLVTILDRARVVAPRLALSTSARSLGGRHVGTGGGEGRDRGEEREGNRRGALSLVGERSSSLGQSGRPSMSGQPLMDAGPRHATPKSAPVVLKSVANQPLWEGQVGPRGNKAGKAVGGGQGAWLVAHGERDGTRTGPGGERRAGLGLDSSPSSASSLPPDGTAAIPPASPLSSLGTEVTSKEGAREEDAMTQNTPRGAGNAEIIAGHTTAADPARRLSTSAGVKFQPPAFYGRVVEPDYERDMGQKTLERGLVKSGMVQEKRPSGTGWARRKCWKDVYLVVDAGAVTVYRQRADSSVVLHRLPVAEVGTRKIVGGDKQDAGMILTCGGESVELQCPAGEGEVDKWLSVLQWNAEVALRRA
Sbjct:    1 GGREGAVGSARKSWGGYHRSVQCSSEERSPHAWLTMYLNSFQVDRASEAKLLLIGWMTAVAVMGAGGVGMWHWITGCNRGLNKQLVTILDRARVVAPRLALSTSARSLGGRHVGTGGGEGRDRGEEREGNRRGALSLVGERSSSLGQSGRPSMSGQPLMDAGPRHATPKSAPVVLKSVANQPLWEGQVGPRGNKAGKAVGGGQGAWLVAHGERDGTRTGPGGERRAGLGLDSSPSSASSLPPDGTAAIPPASPLSSLGTEVTSKEGAREEDAMTQNTPRGAGNAEIIAGHTTAADPARRLSTSAGVKFQPPAFYGRVVEPDYERDMGQKTLERGLVKSGMVQEKRPSGTGWARRKCWKDVYLVVDAGAVTVYRQRADSSVVLHRLPVAEVGTRKIVGGDKQDAGMILTCGGESVELQCPAGEGEVDKWLSVLQWNAEVALRRA 443
The following BLAST results are available for this feature:
BLAST of EWM26847.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108942|gb|EWM26847.1|0.000e+0100.00hypothetical protein Naga_100097g20, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3835rna3835Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications