EWM26852.1, cds3825 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|585108947|gb|EWM26852.1| (iojap-like protein [Nannochloropsis gaditana]) HSP 1 Score: 897.886 bits (2319), Expect = 0.000e+0 Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0 Query: 1 MLSTTTKLMLRRSAVGRRDTSLWSSAGKITVRSLASDSKDVSNGSRGRSKTSFSSTVSPSWPPSRQEMARMFEAGYESYEKNERKGMGRSAMAWKEDGHDEAGGQEGSQGGAGGGSLSPHHDGYDATEMTRQRMELSKATTAATLARTDAKYLNEEERKAHDAEMKALHAGIVAGGGGEDPDDSPSATGGGNHGLGGRGSGREGEGTKGGAVAKAQAGSNSDPEKSLEKWTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDLVMPVAATASEEAWSQAHDALLERYPADEEYAPEREEEARRERELRRVLGPGGKGMGERRRRRKVVGGGR 452 MLSTTTKLMLRRSAVGRRDTSLWSSAGKITVRSLASDSKDVSNGSRGRSKTSFSSTVSPSWPPSRQEMARMFEAGYESYEKNERKGMGRSAMAWKEDGHDEAGGQEGSQGGAGGGSLSPHHDGYDATEMTRQRMELSKATTAATLARTDAKYLNEEERKAHDAEMKALHAGIVAGGGGEDPDDSPSATGGGNHGLGGRGSGREGEGTKGGAVAKAQAGSNSDPEKSLEKWTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDLVMPVAATASEEAWSQAHDALLERYPADEEYAPEREEEARRERELRRVLGPGGKGMGERRRRRKVVGGGR Sbjct: 1 MLSTTTKLMLRRSAVGRRDTSLWSSAGKITVRSLASDSKDVSNGSRGRSKTSFSSTVSPSWPPSRQEMARMFEAGYESYEKNERKGMGRSAMAWKEDGHDEAGGQEGSQGGAGGGSLSPHHDGYDATEMTRQRMELSKATTAATLARTDAKYLNEEERKAHDAEMKALHAGIVAGGGGEDPDDSPSATGGGNHGLGGRGSGREGEGTKGGAVAKAQAGSNSDPEKSLEKWTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDLVMPVAATASEEAWSQAHDALLERYPADEEYAPEREEEARRERELRRVLGPGGKGMGERRRRRKVVGGGR 452
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|299472221|emb|CBN77191.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 112.464 bits (280), Expect = 7.393e-25 Identity = 62/140 (44.29%), Postives = 83/140 (59.29%), Query Frame = 0 Query: 230 WTWARPSRLAQEEAQGRKTSRAGA-IPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFW 368 WTW+ PS + R GA I V+PR L EVV+A+ A GG DV ++D+RGKG + M+F + + +RR+A+ VV ALK R + + A G+TGAEG DC+DWM+VD N+IVH M R L LE W Sbjct: 67 WTWSTPS--------PNRPGRGGAEIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKL--VNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHW 196
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|970664527|gb|KUG01419.1| (Ribosomal silencing factor RsfS [Phytophthora nicotianae]) HSP 1 Score: 104.375 bits (259), Expect = 1.135e-22 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P+T L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR E+ EG DC+DWMI D N++VHLM R L LE W E K GD+ Sbjct: 12 HADIIPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKAR---ELVDDFDYAVEGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW-ENMVDDKHSVYGDM 140
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|970644254|gb|KUF85182.1| (Ribosomal silencing factor RsfS [Phytophthora nicotianae]) HSP 1 Score: 105.145 bits (261), Expect = 1.187e-21 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P+T L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR E+ EG DC+DWMI D N++VHLM R L LE W E K GD+ Sbjct: 149 HADIIPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKAR---ELVDDFDYAVEGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW-ENMVDDKHSVYGDM 277
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|566022059|gb|ETI44970.1| (iojap-like ribosome-associated protein [Phytophthora parasitica P1569] >gi|567988034|gb|ETL38319.1| iojap-like ribosome-associated protein [Phytophthora parasitica] >gi|568017256|gb|ETL91433.1| iojap-like ribosome-associated protein [Phytophthora parasitica] >gi|568047677|gb|ETM44752.1| iojap-like ribosome-associated protein [Phytophthora parasitica] >gi|570949467|gb|ETP14724.1| iojap-like ribosome-associated protein [Phytophthora parasitica CJ01A1] >gi|970647476|gb|KUF87287.1| hypothetical protein AM588_10001548 [Phytophthora nicotianae]) HSP 1 Score: 105.145 bits (261), Expect = 1.235e-21 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P+T L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR E+ EG DC+DWMI D N++VHLM R L LE W E K GD+ Sbjct: 149 HADIIPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKAR---ELVDDFDYAVEGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW-ENMVDDKHSVYGDM 277
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|570325595|gb|ETO73543.1| (iojap-like ribosome-associated protein [Phytophthora parasitica P1976]) HSP 1 Score: 105.145 bits (261), Expect = 1.247e-21 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P+T L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR E+ EG DC+DWMI D N++VHLM R L LE W E K GD+ Sbjct: 149 HADIIPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKAR---ELVDDFDYAVEGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW-ENMVDDKHSVYGDM 277
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|675169215|ref|XP_008893492.1| (iojap-like ribosome-associated protein [Phytophthora parasitica INRA-310] >gi|567959323|gb|ETK84896.1| iojap-like ribosome-associated protein [Phytophthora parasitica] >gi|568107103|gb|ETN21733.1| iojap-like ribosome-associated protein [Phytophthora parasitica INRA-310] >gi|570982811|gb|ETP42792.1| iojap-like ribosome-associated protein [Phytophthora parasitica P10297]) HSP 1 Score: 105.145 bits (261), Expect = 1.389e-21 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P+T L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR E+ EG DC+DWMI D N++VHLM R L LE W E K GD+ Sbjct: 149 HADIIPAIPQTYLTIDEVQQALEREKAIDVYTVDLAGKSSL-ADFMVFATGRSQAHMRRMADLLIKSMKAR---ELVDDFDYAVEGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW-ENMVDDKHSVYGDM 277
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|953502906|emb|CEG36233.1| (iojap-like ribosome-associated protein [Plasmopara halstedii]) HSP 1 Score: 102.834 bits (255), Expect = 8.214e-21 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P+T L EV +AL DV +VD+ GK A M+F +GRS H+RRMAD ++ +LKAR I + GV EG DC+DWMI D N++VH M R L LE W E K GD+ Sbjct: 146 HADIIPPIPQTYLSLDEVQKALEREKAIDVYTVDLSGKSGL-ANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDYGV---EGRDCDDWMIADCNNIVVHFMRADTRRILALEDHW-ENMVDDKHSVYGDM 274
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|1214699246|gb|OWZ12087.1| (Iojap-like ribosome-associated protein [Phytophthora megakarya]) HSP 1 Score: 101.679 bits (252), Expect = 2.137e-20 Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEGRKGGRVGDL 383 A IP +P++ L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR I + V EG DC+DWMI D N++VHLM R L LE W E K GD+ Sbjct: 149 HADIIPPIPQSYLTIEEVKDALEREKAIDVYTVDLAGKTSL-ADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILALEDHW-ENMVDDKHSVYGDM 277
BLAST of EWM26852.1 vs. NCBI_GenBank
Match: gi|301108531|ref|XP_002903347.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262097719|gb|EEY55771.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 98.5969 bits (244), Expect = 2.381e-19 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0 Query: 250 RAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFW 368 A IP + + L EV +AL DV +VD+ GK + A+ M+FA+GRS H+RRMAD ++ ++KAR I + V EG DC+DWMI D N++VHLM R L LE W Sbjct: 148 HADIIPAISQIYLTIDEVQQALEREKAIDVYTVDLAGKTSL-ADFMVFATGRSQAHMRRMADLLIKSMKAREIVDDFDYAV---EGRDCDDWMIADCNNIVVHLMRADTRRILNLEDHW 262 The following BLAST results are available for this feature:
BLAST of EWM26852.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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