rna3815, rna3815 (mRNA) Nannochloropsis gaditana

Overview
Namerna3815
Unique Namerna3815
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length576
Alignment locationCM002462.1:122915..124298 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100097g2.3750.mrna
Orig protein idgnl|cribi|Naga_100097g2.3750
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:122915..124298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100097g2gene3673Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26859.1cds3806Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3815rna3815-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3815 ID=rna3815|Name=rna3815|organism=Nannochloropsis gaditana|type=mRNA|length=576bp
ATGAATTTTAGCCGGCAACGTCAAGGGTCTGGTCACCGTGAACGTGGAGG
TTGGCCAGCGGACCTGGTCATTCTCGCCATGGGCTTCATGAACCCTGAAA
GCACGATCCCCTCGGGCCTGTCTTTGGACGTGGACCAACGCCACAACATT
CGGGCCGACTACGGTGATTATCGGACGAACGTGGACGGGGTTTTCGCGGC
GGGAGACTGCCGGCGGGGACAGTCCCTGGTCGTATGGGCCATCAACGAGG
GGCGGGGCGTGGCGGAGAGCGTCAACAAATTCTTGATCGAAAAATCCGAG
GTCACTGAGGATGAAGCCTACATTGGCGCCATCGAGGAGAGGGGTAGGCG
TGGCCGAGGGTTTGCTGGAAGGAAGGGCCGTGAGGAGGAGACAGCTCTGG
GGGGCGCGCGTACTTGGACGCCCGCTGCGGGGGTTTATGCAATCTTTGAT
GAAAGGAGTAAGGTCAGTGGCTTGTTTTCGCGCCATTTTTCACGTCCACA
GAAACCGTCGCGGGCCATTCCCTCTCTGCTCTTCGGGGAACGAGGGGAAC
TGGGACGGGAAGAGGAAAAAAGATAG
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protein sequence of rna3815

>rna3815-protein ID=rna3815-protein|Name=rna3815|organism=Nannochloropsis gaditana|type=polypeptide|length=260bp
MVPNHAVGAFLGSRQPGGRRWPSGAAHLVRHPRGVGGRNGGGEHCDAVRP
RPNRHGRFDREGFPTRAGSHDQGGGGKRLLFQRFDGRDTRGDSKSGHCLR
LSLGLPRGTDAVEGGGGGEGALDADFTKLDLSFNPFLSRNLELLSEEVDR
MSGQLEKCKRFATGQGGRGSYHGGPRSWSRRKEEEEERNAEPNRLDTVMT
ATQIDAYCQQISAFSKGGFSKLYLVGSLHKEASPAGGEGGKEGEGEGGRD
GQELGWKRLE
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mRNA from alignment at CM002462.1:122915..124298-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3815 ID=rna3815|Name=rna3815|organism=Nannochloropsis gaditana|type=mRNA|length=1384bp|location=Sequence derived from alignment at CM002462.1:122915..124298- (Nannochloropsis gaditana)
ATCTCTTTGACCGCGCACACGGCAATGCCGTCACCTCTGTCACCGTTCTC
GGCACACCCATGTCCTTCTCAACACGTTCCTTTGCACGCGACTCACAGGT
GGTAGCTTGGTGGGACGATCATGGATCCTCATATCGATATATCTCCTCCA
TCTACGGCCCCTCCCCGCGGGATCATATCCGAGGTCCAAATCGACGGGTC
AGCCCTGCTCCGCGTCGTCAAGCATTGCGAAGATAATCTACCAGGGAATT
CAACGGGTGCATTGTTGGGTCTGGACGTGCCAAAAGAAAACGGCAAGGTG
GTGATGCACGTGACGTACGCTTTCGCCCTGCCCCGGACGCGGGACGGAGA
GGAGCGGGGTGGGCGCACGGAGGACGAGGAGGCGGAAGAGGAGCGTGGCG
ATATGGCCAAGCACGAATACAAGGGGCACATGATGAAGCTGCTCAAGGAA
GTGAACGTGGACAATAACATGGTGGGATGGTACCGAACCATGCAGTTGGG
GCATTTCTCGGAAGCAGGCAGCCGGGTGGACGCCGCTGGCCTTCGGGCGC
AGCGCACCTTGTTCGACATCCCCGTGGCGTTGGCGGACGAAATGGTGGAG
GCGAACATTGTGATGCTGTACGACCCCGTCCAAACCGCCATGGGAGATTT
GACCGTGAAGGCTTTCCGACACGTGCGGGTTCCCACGACCAGGGAGGAGG
TGGAAAGCGTCTCCTCTTTCAAAGATTTGATGGAAGAGATACCCGTGGTG
ATTCGAAATCCGGGCATTGTCTCCGCCTTTCTCTGGGATTACCAAGAGGA
ACGGATGCCGTCGAGGGGGGCGGGGGCGGGGAGGGCGCACTGGATGCTGA
TTTCACGAAATTGGATCTGTCTTTCAACCCATTCCTGTCTCGAAACTTAG
AGCTTTTGTCGGAGGAAGTGGACCGAATGTCGGGGCAACTGGAGAAATGC
AAACGCTTCGCCACGGGCCAGGGCGGTCGGGGAAGTTACCATGGGGGGCC
TCGGTCGTGGAGCAGGCGGAAGGAGGAGGAGGAAGAGCGAAATGCGGAGC
CGAACAGGTTGGACACGGTGATGACAGCCACGCAGATCGATGCGTACTGC
CAACAGATCTCCGCATTCAGCAAGGGCGGTTTCAGCAAGTTGTATTTGGT
GGGGAGTTTGCACAAGGAGGCGTCCCCGGCGGGAGGGGAGGGCGGGAAGG
AGGGGGAGGGGGAGGGAGGGCGGGACGGGCAGGAACTGGGTTGGAAGAGA
CTGGAGTAGGGAGCGTCAGTGGTGTGTGGTAATGGAGTGGAACGTGTGTA
CCCAAGCAGGCAAAAAAAAGGGATGCGAGCGGGCAAAGGGGGGAAATCAT
CCCTGTCGGTGCCCACGCGTATCCTTCCTTCATC
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Coding sequence (CDS) from alignment at CM002462.1:122915..124298-

>rna3815 ID=rna3815|Name=rna3815|organism=Nannochloropsis gaditana|type=CDS|length=783bp|location=Sequence derived from alignment at CM002462.1:122915..124298- (Nannochloropsis gaditana)
ATGGTACCGAACCATGCAGTTGGGGCATTTCTCGGAAGCAGGCAGCCGGG
TGGACGCCGCTGGCCTTCGGGCGCAGCGCACCTTGTTCGACATCCCCGTG
GCGTTGGCGGACGAAATGGTGGAGGCGAACATTGTGATGCTGTACGACCC
CGTCCAAACCGCCATGGGAGATTTGACCGTGAAGGCTTTCCGACACGTGC
GGGTTCCCACGACCAGGGAGGAGGTGGAAAGCGTCTCCTCTTTCAAAGAT
TTGATGGAAGAGATACCCGTGGTGATTCGAAATCCGGGCATTGTCTCCGC
CTTTCTCTGGGATTACCAAGAGGAACGGATGCCGTCGAGGGGGGCGGGGG
CGGGGAGGGCGCACTGGATGCTGATTTCACGAAATTGGATCTGTCTTTCA
ACCCATTCCTGTCTCGAAACTTAGAGCTTTTGTCGGAGGAAGTGGACCGA
ATGTCGGGGCAACTGGAGAAATGCAAACGCTTCGCCACGGGCCAGGGCGG
TCGGGGAAGTTACCATGGGGGGCCTCGGTCGTGGAGCAGGCGGAAGGAGG
AGGAGGAAGAGCGAAATGCGGAGCCGAACAGGTTGGACACGGTGATGACA
GCCACGCAGATCGATGCGTACTGCCAACAGATCTCCGCATTCAGCAAGGG
CGGTTTCAGCAAGTTGTATTTGGTGGGGAGTTTGCACAAGGAGGCGTCCC
CGGCGGGAGGGGAGGGCGGGAAGGAGGGGGAGGGGGAGGGAGGGCGGGAC
GGGCAGGAACTGGGTTGGAAGAGACTGGAGTAG
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Synonyms
Publications