EWM26881.1, cds3790 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|585108997|gb|EWM26881.1| (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0 Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0 Query: 1 MEEPSHSQTGVNDDDNDLNNWPDGGDLHNVECQGNRNSINYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVDGELRRQGGRGGGGGWEERTEEGRWKGTQERKLTMHVYVSGAEWPFGSDIKDKSSRSSV 400 MEEPSHSQTGVNDDDNDLNNWPDGGDLHNVECQGNRNSINYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVDGELRRQGGRGGGGGWEERTEEGRWKGTQERKLTMHVYVSGAEWPFGSDIKDKSSRSSV Sbjct: 1 MEEPSHSQTGVNDDDNDLNNWPDGGDLHNVECQGNRNSINYTFFSRNLDAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVDGELRRQGGRGGGGGWEERTEEGRWKGTQERKLTMHVYVSGAEWPFGSDIKDKSSRSSV 400
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|585109702|gb|EWM27447.1| (transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 124.405 bits (311), Expect = 4.777e-28 Identity = 92/297 (30.98%), Postives = 133/297 (44.78%), Query Frame = 0 Query: 50 AVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETGWVFAQKYFGVSTHYRMED-DGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFL---VPWLASRDACVHIFACDATERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVD 342 A + Q L + E NVQ A+R +Q L D RL LA L K+ +F T G TG P + MA + RLE L RRV C +A SE W A G+ T R ++ D TL R ++E+C V +LAVLREAD Y W P + S +V+ +GK E ++WF+ +P++ RDA +H++ CDA+E +++L G SI E E G + P WN AR++++ Q+ +L P +D Sbjct: 40 AANETQALQVGEENVQVAYRLVQLLDADTRLFLADDLLQKIEAF---TRTG-----TG-------------------PQAEWAMHVMARSEDSQRLEELRRRVQVCRQAARDMQSE-DWELAHTEEGIQTFLRRDEGDNTLAWRTHGEIEDCPVVSQLAVLREADHYHDWIPLMDKSKVVKRLGKIEQMLWFRVAGRGLPFV--RDAVLHLYGCDASEEDLIILSGASIPEDEITESMG-------------------------VRPPKKKWNHARVDIKYFSIQLRILSPTHTKID 281
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|673042339|ref|XP_008875130.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574469323|gb|ETV96338.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 122.094 bits (305), Expect = 2.130e-26 Identity = 90/290 (31.03%), Postives = 132/290 (45.52%), Query Frame = 0 Query: 49 DAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASE--TGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDAT-ERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLG 335 D + D ++ +T+ NV+ + ++Q LV DERL A L+ KL+ FL A T L D + + +A TR L+ + R + AL F ++ GW F Q YFG+STH++ DDGT+ ++L E VF +AV+RE DL+ LWAPF S+L+ + + E++ + +P L RDA +H F +A E +LL GQS L D P PP+ GWN+ RM +R IE G Sbjct: 549 DVLPDYSNVVVTQDNVEWVWAHVQMLVSDERLFSAADLYDKLVGFLDTAPRVKATVATVL---------------------DKIEREIAAQATR--LQQVKARRDQGNAALHEFNADEAAGWQFGQTYFGISTHWKPGDDGTVWLKLDGICEGVDVFHAMAVIRETDLFYLWAPFCNKSTLLAGLSRVEILTYVNIAIP-LMQRDAVIHAFGINAVYEHRCVLLLGQSA--------------------------LQDDHPTSRFPPI-KGWNADRMHIRAFRALIEPYG 787
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|1173946362|gb|OQR94905.1| (transmembrane protein, partial [Thraustotheca clavata]) HSP 1 Score: 121.324 bits (303), Expect = 3.749e-26 Identity = 94/299 (31.44%), Postives = 138/299 (46.15%), Query Frame = 0 Query: 49 DAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFA--SETGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDAT-ERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLG---PRACCV 341 + + D H+ + NVQ + ++Q L+ +ERL A L KL FL +P G +C+ ++S + + R AM H +AL F ++ GW FAQ YFGVSTH++ DDGT+ ++L E +F+ LAV+RE DL+ LWAPF S L+ +G+ EL+ + +P L RDA VH F +AT E ++L G+SI E + + L PP+ GWN+ RM++R IE G R C V Sbjct: 423 ETLVDYSHVVVGLENVQWVWTHIQYLINEERLFSAAPLIEKLEQFL--------SPRLGNRQCADINQLVQGKLSELSQVKE--RSAMGH------------------QALHEFNLDADAGWRFAQTYFGVSTHWKPGDDGTIWLKLDGICEGVDIFNALAVIRETDLFHLWAPFCNRSELLANLGRVELIAYMSLAIP-LMQRDAIVHAFGINATYEHRCIVLLGKSITEDQC------------------------PVNNLEFPPI-KGWNADRMDLRAFRALIEPYGRNRARTCIV 667
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|673042337|ref|XP_008875129.1| (hypothetical protein H310_10499 [Aphanomyces invadans] >gi|574469322|gb|ETV96337.1| hypothetical protein H310_10499 [Aphanomyces invadans]) HSP 1 Score: 120.553 bits (301), Expect = 7.670e-26 Identity = 91/299 (30.43%), Postives = 135/299 (45.15%), Query Frame = 0 Query: 49 DAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASE--TGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDAT-ERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLG---PRACCV 341 D + D ++ +T+ NV+ + ++Q LV DERL A L+ KL+ FL A T L D + + +A TR L+ + R + AL F ++ GW F Q YFG+STH++ DDGT+ ++L E VF +AV+RE DL+ LWAPF S+L+ + + E++ + +P L RDA +H F +A E +LL GQS + + R PP+ GWN+ RM +R IE G R C V Sbjct: 549 DVLPDYSNVVVTQDNVEWVWAHVQMLVSDERLFSAADLYDKLVGFLDTAPRVKATVATVL---------------------DKIEREIAAQATR--LQQVKARRDQGNAALHEFNADEAAGWQFGQTYFGISTHWKPGDDGTVWLKLDGICEGVDVFHAMAVIRETDLFYLWAPFCNKSTLLAGLSRVEILTYVNIAIP-LMQRDAVIHAFGINAVYEHRCVLLLGQSALQDDHPTSR--------------------------FPPI-KGWNADRMHIRAFRALIEPYGRNRNRTCIV 796
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|1173950290|gb|OQR98263.1| (transmembrane protein [Achlya hypogyna]) HSP 1 Score: 117.857 bits (294), Expect = 6.029e-25 Identity = 94/302 (31.13%), Postives = 139/302 (46.03%), Query Frame = 0 Query: 49 DAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLD---RRVNACVEALDLFASET--GWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDAT-ERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGP---RACCV 341 + + D H+ + N Q + ++Q L+ +ERL A L KL FL +R+ P A H Q +A+L +L+ R ++AL F ++ GW FAQ YFGVSTH++ +D T+ ++L E +F+ LAV+RE DL+ LWAPF S L+ +G+ EL+ + +P L RDA VH F +AT E ++L G+SI E E+ P + L PP+ GWN+ RME+R +E G R C V Sbjct: 519 ETLMDYGHVAVNLDNAQWVWTHIQFLINEERLFSAAPLIEKLEQFLA------------------------ARLDTPA-------CAAIHAQLQAKLPALELVKERAVQGLQALHEFNADADAGWRFAQTYFGVSTHWKPGNDATIWLKLDGICEGVDIFNALAVVRETDLFNLWAPFCNKSELLANLGRVELITYLSVAIP-LMQRDAVVHAFGINATYEHRCVVLLGKSITE--------------------EQSP----VNNLEFPPV-KGWNADRMELRAFRALVEPYGRNRGRTCIV 763
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|698790930|ref|XP_009828497.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574116276|gb|ETV81760.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 113.62 bits (283), Expect = 1.758e-23 Identity = 91/299 (30.43%), Postives = 134/299 (44.82%), Query Frame = 0 Query: 49 DAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASE--TGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDAT-ERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLG---PRACCV 341 D + D H+ +T NV+ + ++Q L+ DERL A L KL +F+ + AP S+ + + D + MA ARL + R + AL F ++ GW F Q YFGVSTH++ DDGT+ ++L E VF+ +AV+RE DL+ LWAP S+L+ + + E++ + +P L RDA +H F +A E +LL GQS + + VP P GWN+ RM +R IE G R C V Sbjct: 551 DVLPDYTHIKVTMANVEWVWAHVQMLMSDERLFSAAELADKLHAFVQM------APRPPGSKAADTL--------------DKIDGEMA--AQDARLRQVTTRRDLGNAALHEFNADEAAGWRFGQTYFGVSTHWKPGDDGTVWLKLDGICEGVDVFNAMAVIRETDLFALWAPCCNKSALLASLSRVEILTYASIAIP-LMQRDAVIHAFGINAVYEHRCVLLLGQSATQEDH-----------------PTVPF----------PAVKGWNADRMHIRAFRALIEPYGRNRNRTCIV 799
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|397563876|gb|EJK43974.1| (hypothetical protein THAOC_37531, partial [Thalassiosira oceanica]) HSP 1 Score: 112.849 bits (281), Expect = 2.699e-23 Identity = 68/197 (34.52%), Postives = 98/197 (49.75%), Query Frame = 0 Query: 166 TGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLA-SRDACVHIFACDA-TERGVLLLCGQSIREGE----------GKGGRGEG-------------RGKEGGAGGMEKVPLFDAI-PGLNIPPLASGWNSARMEVRKCWCQIELLGP 336 TGWV AQ FGVSTHYR E DG+L++R+ DL +F++LA+LRE DLY WAPF +S + ++G+ ++ W+ VP SRDAC CD E G +++ + + + GK R G G E G + D I L +PP+ SG RM +R ++++LGP Sbjct: 115 TGWVHAQTLFGVSTHYRRESDGSLSIRIAGDLVGVPLFEQLAILREVDLYHAWAPFCVSSRKLAQLGRLDVAAWYDVGVPIFGLSRDACYRAVGCDGMAEDGSVMIVAVGLNDTDEHGVVSSASLGKQTRKRGPSPPAAASDDDDAEGLEATEGSLLSSLARDEILSTLEMPPVPSGAGRGRMTIRNFSAKVDVLGP 311
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|698790928|ref|XP_009828496.1| (hypothetical protein H257_05351 [Aphanomyces astaci] >gi|574116275|gb|ETV81759.1| hypothetical protein H257_05351 [Aphanomyces astaci]) HSP 1 Score: 112.464 bits (280), Expect = 3.968e-23 Identity = 91/299 (30.43%), Postives = 134/299 (44.82%), Query Frame = 0 Query: 49 DAVADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASE--TGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDAT-ERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLG---PRACCV 341 D + D H+ +T NV+ + ++Q L+ DERL A L KL +F+ + AP S+ + + D + MA ARL + R + AL F ++ GW F Q YFGVSTH++ DDGT+ ++L E VF+ +AV+RE DL+ LWAP S+L+ + + E++ + +P L RDA +H F +A E +LL GQS + + VP P GWN+ RM +R IE G R C V Sbjct: 551 DVLPDYTHIKVTMANVEWVWAHVQMLMSDERLFSAAELADKLHAFVQM------APRPPGSKAADTL--------------DKIDGEMA--AQDARLRQVTTRRDLGNAALHEFNADEAAGWRFGQTYFGVSTHWKPGDDGTVWLKLDGICEGVDVFNAMAVIRETDLFALWAPCCNKSALLASLSRVEILTYASIAIP-LMQRDAVIHAFGINAVYEHRCVLLLGQSATQEDH-----------------PTVPF----------PAVKGWNADRMHIRAFRALIEPYGRNRNRTCIV 799
BLAST of EWM26881.1 vs. NCBI_GenBank
Match: gi|325188207|emb|CCA22748.1| (transmembrane protein putative [Albugo laibachii Nc14]) HSP 1 Score: 112.464 bits (280), Expect = 4.662e-23 Identity = 96/336 (28.57%), Postives = 151/336 (44.94%), Query Frame = 0 Query: 15 DNDLNNWPDGGDLHNVECQGNRNSINYTFFSRNLDA---VADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAGVAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDRRVNACVEALDLFASETG--WVFAQKYFGVSTHYRMEDDGTLTVRLRADLEECSVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASRDACVHIFACDA-TERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVPLFDAIPGLNIPPLASGWNSARMEV---RKCWCQIELLGPRACCV 341 ++ L + P D HN+ Q +R+ N S L+A + D + +T N + A++++Q L +ERL A L ++ S++ P+ L+ +SV+ AM + L+ + +R +AL F ++ G W FAQ Y GVST ++ D+GT+ +++ +E +F+ LAV+RE DLY WAPF S ++ ++G+CEL+ +F +P L RDA +H F +A E +LL G E M VP GWNS R+ + R IE L RAC V Sbjct: 593 NDTLGSIPSTIDKHNIHSQMHRDE-NEQPISDELNATECLLDYSDIVITAKNFEWAWKHIQLLRIEERLFSATLLLDRMESYIS------KLPDENLNL------------------IESVQTAMK--EEEGALKQIRKRTQCASQALHDFNNDEGADWQFAQSYLGVSTFWKPGDNGTIWLKMDGIIEGADIFNTLAVIREIDLYRHWAPFCNNSEILSDIGRCELLAYFCLSLP-LTPRDAVLHAFGVNACYEHRCVLLLG------------------ETPDSSMIDVPKM------------KGWNSDRIHIHGFRALIEPIEKLTTRACIV 870 The following BLAST results are available for this feature:
BLAST of EWM26881.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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