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Properties
| Property Name | Value |
|---|
| Product | transmembrane protein |
| Orig transcript id | gnl|cribi|Naga_100596g3.4394.mrna |
| Orig protein id | gnl|cribi|Naga_100596g3.4394 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:81821..83308 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3799 ID=rna3799|Name=rna3799|organism=Nannochloropsis gaditana|type=mRNA|length=810bp
CAGCTACTACCTCTTCTTCTTCTCCGTCGCCTTCGTTCAGTCCGTGCAGC
GGGCTTGGCAGAAGAAAGTCTCGCCCTACTTCGCCTCCGTCCCAAGGCTG
TATACCCTCCTCTCCATCGCCTTCTTCTCCGCCTACATCAACTACTTTTC
CATCGTGTTCCAGGTCCTCGCATGGGATCGGGCCTTGGCGGTGTGGAAGA
GCGCGAACTACTGGGGCCATGCGGCGACGGCCGCTGCCTTCCTTTTAACC
TCGATCTTACCCACACCGCCCAAGGAGAAGGGGGCTGGGAAGAAGGCATG
AAAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
CGGGGACGACTGTAGCAAGGAAGGGCAAAGGTAGATGGGTAAAGGAGACA
AAAACGTTGGAAAAATGTGAGAGACTCACACTTTCAGAGGAATGTTTGTT
TGGTGACTGCAGTGAAAGATGGAGGGGAAAGAGGCTCTTGATGTAGAAGG
GACGGTAGGGAGGGAGGGAGGGAGGGAGGGTGGGAGGGAGGGAGAAGGGG
AGGAGGTCGTGGGTGAGAAAAATCCTGCGGATGCTGTCGAGAGGCACTGA
CATGCGATGATTGAATCGTGCGAGTCGATGCAAAAGAAGGAAAGACCACC
CCGAGCGCCGACCATGGGCCCATATCCATAGGGGCAGTCGGTCAAACGAG
GAATGTCCTGGAAGCTTCTTGCGTCGGAGTCGACTGCAGGCGTCCCAGCC
ATGCTCGTTTCGCACATAATGGCAATTTGCAAAAGTCCTGCATGCATCAG
AAAGGGGAGG back to topprotein sequence of rna3799 >rna3799-protein ID=rna3799-protein|Name=rna3799|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp
MEEPSHSQTGVNDDDNDLNNWPDGGDLHNVECQGNRNSINYTFFSRNLDA
VADVQHLTLTETNVQKAFRNLQCLVCDERLLLAHTLWHKLISFLGVTEAG
VAAPETGLSECSKGVFPSPSRISPPTPNTDSVRQAMAHPQTRARLESLDR
RVNACVEALDLFASETGWVFAQKYFGVSTHYRMEDDGTLTVRLRADLEEC
SVFDELAVLREADLYPLWAPFVRASSLVQEVGKCELVIWFQFLVPWLASR
DACVHIFACDATERGVLLLCGQSIREGEGKGGRGEGRGKEGGAGGMEKVP
LFDAIPGLNIPPLASGWNSARMEVRKCWCQIELLGPRACCVDGELRRQGG
RGGGGGWEERTEEGRWKGTQERKLTMHVYVSGAEWPFGSDIKDKSSRSSV back to topmRNA from alignment at CM002462.1:81821..83308- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3799 ID=rna3799|Name=rna3799|organism=Nannochloropsis gaditana|type=mRNA|length=1488bp|location=Sequence derived from alignment at CM002462.1:81821..83308- (Nannochloropsis gaditana)
ATGAAATATATTTTTCCCCTCAAAGTCTGGAGTGCTTGGCTGATTGATAA
GGCATGATATCTTACACACAAGTTACAAACACAAGTTACAGCCCGCTCAA
CAACACATATTGCTGTGAACACCGTAAAGAATCGGTAGCTTCGTTTTTTA
TCTCCATCGGTACCTCACAACTCAGGCACGATGGGTGGGTGGCGTCAAGC
ATAATTCAGACAAGAGCCAAAAAGACAAGCAAGTGAAGACATGCGCGAAT
GACACAAACTTGGTTGCGCTGTCGCATTTCCTTCGATGGAAGAACCGAGC
CACAGCCAAACGGGTGTCAATGATGATGATAATGACTTAAATAATTGGCC
CGATGGTGGCGACCTGCATAACGTGGAGTGTCAAGGCAACAGGAATTCTA
TCAATTATACATTTTTTTCACGAAATCTTGATGCGGTAGCCGACGTCCAG
CACCTGACGTTAACGGAAACGAACGTTCAAAAAGCCTTCCGGAATTTGCA
ATGCCTGGTTTGCGACGAGCGTCTGCTACTGGCCCACACCTTGTGGCACA
AGCTCATATCGTTCCTGGGAGTGACGGAGGCGGGCGTGGCAGCCCCAGAG
ACTGGCCTCTCTGAGTGCTCCAAGGGAGTCTTTCCCTCCCCCTCCCGCAT
TTCCCCCCCCACCCCCAACACTGACTCTGTGCGCCAGGCCATGGCCCACC
CTCAGACACGTGCTCGATTGGAGAGCTTGGACCGCCGGGTCAACGCCTGC
GTGGAGGCCTTGGATCTCTTTGCCTCGGAAACAGGCTGGGTTTTCGCGCA
AAAATATTTCGGCGTCAGCACACACTACCGCATGGAAGATGATGGCACGT
TGACGGTGCGCCTGCGCGCCGACTTGGAAGAGTGTTCCGTGTTCGACGAG
CTGGCAGTGTTGAGAGAGGCGGATTTGTATCCACTCTGGGCGCCGTTCGT
ACGGGCTTCCTCCCTCGTTCAGGAGGTGGGCAAATGCGAATTGGTCATCT
GGTTTCAATTCCTCGTCCCCTGGCTTGCGTCGCGAGATGCCTGCGTCCAT
ATTTTTGCATGCGATGCCACGGAGAGGGGGGTCTTGTTGTTGTGCGGGCA
GAGTATAAGGGAAGGAGAGGGCAAGGGCGGGCGGGGGGAAGGAAGGGGGA
AAGAGGGAGGCGCTGGCGGGATGGAAAAGGTCCCCCTCTTCGACGCCATC
CCGGGCTTAAACATCCCTCCGCTGGCATCGGGCTGGAATTCTGCGAGGAT
GGAAGTCCGAAAATGCTGGTGTCAAATTGAGCTTCTGGGGCCGCGCGCAT
GTTGTGTGGACGGTGAGTTGAGGAGGCAGGGAGGGAGGGGGGGGGGAGGT
GGATGGGAAGAACGCACGGAGGAAGGGCGCTGGAAAGGCACGCAGGAGAG
AAAGCTCACAATGCATGTCTATGTCAGCGGTGCAGAGTGGCCGTTTGGCA
GCGATATAAAGGATAAGAGCTCACGGTCTAGTGTCTAG back to topCoding sequence (CDS) from alignment at CM002462.1:81821..83308- >rna3799 ID=rna3799|Name=rna3799|organism=Nannochloropsis gaditana|type=CDS|length=1203bp|location=Sequence derived from alignment at CM002462.1:81821..83308- (Nannochloropsis gaditana)
ATGGAAGAACCGAGCCACAGCCAAACGGGTGTCAATGATGATGATAATGA
CTTAAATAATTGGCCCGATGGTGGCGACCTGCATAACGTGGAGTGTCAAG
GCAACAGGAATTCTATCAATTATACATTTTTTTCACGAAATCTTGATGCG
GTAGCCGACGTCCAGCACCTGACGTTAACGGAAACGAACGTTCAAAAAGC
CTTCCGGAATTTGCAATGCCTGGTTTGCGACGAGCGTCTGCTACTGGCCC
ACACCTTGTGGCACAAGCTCATATCGTTCCTGGGAGTGACGGAGGCGGGC
GTGGCAGCCCCAGAGACTGGCCTCTCTGAGTGCTCCAAGGGAGTCTTTCC
CTCCCCCTCCCGCATTTCCCCCCCCACCCCCAACACTGACTCTGTGCGCC
AGGCCATGGCCCACCCTCAGACACGTGCTCGATTGGAGAGCTTGGACCGC
CGGGTCAACGCCTGCGTGGAGGCCTTGGATCTCTTTGCCTCGGAAACAGG
CTGGGTTTTCGCGCAAAAATATTTCGGCGTCAGCACACACTACCGCATGG
AAGATGATGGCACGTTGACGGTGCGCCTGCGCGCCGACTTGGAAGAGTGT
TCCGTGTTCGACGAGCTGGCAGTGTTGAGAGAGGCGGATTTGTATCCACT
CTGGGCGCCGTTCGTACGGGCTTCCTCCCTCGTTCAGGAGGTGGGCAAAT
GCGAATTGGTCATCTGGTTTCAATTCCTCGTCCCCTGGCTTGCGTCGCGA
GATGCCTGCGTCCATATTTTTGCATGCGATGCCACGGAGAGGGGGGTCTT
GTTGTTGTGCGGGCAGAGTATAAGGGAAGGAGAGGGCAAGGGCGGGCGGG
GGGAAGGAAGGGGGAAAGAGGGAGGCGCTGGCGGGATGGAAAAGGTCCCC
CTCTTCGACGCCATCCCGGGCTTAAACATCCCTCCGCTGGCATCGGGCTG
GAATTCTGCGAGGATGGAAGTCCGAAAATGCTGGTGTCAAATTGAGCTTC
TGGGGCCGCGCGCATGTTGTGTGGACGGTGAGTTGAGGAGGCAGGGAGGG
AGGGGGGGGGGAGGTGGATGGGAAGAACGCACGGAGGAAGGGCGCTGGAA
AGGCACGCAGGAGAGAAAGCTCACAATGCATGTCTATGTCAGCGGTGCAG
AGTGGCCGTTTGGCAGCGATATAAAGGATAAGAGCTCACGGTCTAGTGTC
TAG back to top
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