|
Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_101541g1.2983.mrna |
Orig protein id | gnl|cribi|Naga_101541g1.2983 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002462.1 | supercontig | CM002462.1:76611..77450 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3797 ID=rna3797|Name=rna3797|organism=Nannochloropsis gaditana|type=mRNA|length=647bp CCTCCTCTGCGCTTGGCCTCATCTCGTGTCCCCCTCCCTCCGCCCGCCCT TTTTCTCCTCCCAGGGACTTCCCACCCTCCTTCTCTCCGCTCCTGCTTCC CCCTCGTCCTCCCGCTCTCCCCTCCTCCATCCCTCCTCCTCCCCCTCCTC CCCATCTTCCCTCTTCCTCGCCCCAGCCGACCCCATCCCCCCTCCGTTGA CCTGTCCCTATTCCTCATTTCCCGTCACTTCCGAGCAAAAGCGGCGAAGC AACGAAGAGACAGGAATGGATGCGTATGGAAACGAGCTAAAGCGCCCTAT TTTGTCACCTCCGTCCAAGGGGGGGGACGGCAAGTTGTCATGTTGAACAA AAACACTTTCAGGATAGAACTGTAGGAAAAACTGGAATGGACAGAAACTA GAAGTCCCAAAGCCTCTGATATATCCATGCCCTAGTTTTTGTAATTATTG AAAGAAAAACGGGTGCCATGCCAGAGGAGTGCGGCCTGCGAAACTAGGTT ACGACCCATGCTAGTCGAGTTTTAAGTGCAACGTAAATTTATTTTCTCTT GATCTCGGGCACGTTGGGTATCAACAATTGTCATTTGACACGTGAATACC CATTTACCTTTGCGTGCTGAGGGAGACCTGGCAACTAAAGCAAGGAC back to topprotein sequence of rna3797 >rna3797-protein ID=rna3797-protein|Name=rna3797|organism=Nannochloropsis gaditana|type=polypeptide|length=157bp MFPSPPTGPSILTPPGNMTSLIHEKHLDALVSFFQSWVPLADKTVYLTVP GMDQALAPLGETLGFDIGMLKVIHVPCLSALGHPHPFAIHQRQTRFLPPA GTVVRPRDIWKSVDPFFPVRSHLLPHHLLRPTQAHRHPSLPLHHDLHEPQ PPLPPLR back to topmRNA from alignment at CM002462.1:76611..77450+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3797 ID=rna3797|Name=rna3797|organism=Nannochloropsis gaditana|type=mRNA|length=840bp|location=Sequence derived from alignment at CM002462.1:76611..77450+ (Nannochloropsis gaditana) AtgttcccctctccgcccacaGGGCCGTCGATCCTGACTCCTCCAGGAAA
CATGACAAGCCTTATACATGAAAAGCATTTGGATGCTCtggtctccttct
ttcaaaGCTGGGTGCCACTGGCGGACAAGACGGTGTACCTGACCGTGCCC
GGGATGGACCAGGCCCTAGCCCCGCTGGGCGAGACTTTGGGCTTCGATAT
CGGGATGCTGAAGGTAATGTGGAACCTGCTAGGATACATACGCTTTGTCC
ACTCTTCTCCCGAGGTGGCATTTTAAAAGATTAAGCAGTCTACAGTGGGG
AGCGTTGCCtgatttccccctccctttcccttctcttcttccctctccct
tttcctctcagTACGTGCTAGCCATGTTCCTTGCCTATCCGCTCTCGGGC
ATCCTCACCCTTTTGCCATCCACCAACGCCAAAcacgctttctccctcct
gctggGACTGTGGTACGCCCAAGAGATATTTGGAAATCAGGTGCGGTGGG
TCTGGGGAATTGTCGGGGCGAGGCATAGGACAGGGTGGCGCCGCgggggg
gacaagaaggggatgTGAGGGTGCGGGTGATGTGAGAGCGCAGTTTGCAA
CGAAAAATGGAGGCTTGTCACGATTCGTAAACGTTCAGGTGccgaccctt
cctcccctccctccctccctccctccctccctccctccctcttcccccct
cagTGGATCCATTCTTTCCTGTCCGCAGCCATCTCTTACCTCATCATCTG
CTTCGGCCCACGCAAGCACATCGCCACCCtagtcttcctcttcaccatGA
CCTACATGAGCCTCAGCCACCTCTACCGCCTTTACGTTGA back to topCoding sequence (CDS) from alignment at CM002462.1:76611..77450+ >rna3797 ID=rna3797|Name=rna3797|organism=Nannochloropsis gaditana|type=CDS|length=1422bp|location=Sequence derived from alignment at CM002462.1:76611..77450+ (Nannochloropsis gaditana) AtgttcccctctccgcccacaGGGCCGTCGATCCTGACTCCTCCAGGAAA CATGACAAGCCTTATACATGAAAAGCATTTGGATGCTCtggtctccttct ttcaaaGCTGGGTGCCACTGGCGGACAAGACGGTGTACCTGACCGTGCCC GGGATGGACCAGGCCCTAGCCCCGCTGGGCGAGACTTTGGGCTTCGATAT CGGGATGCTGAAGGTAATCCATGTTCCTTGCCTATCCGCTCTCGGGCATC CTCACCCTTTTGCCATCCACCAACGCCAAAcacgctttctccctcctgct ggGACTGTGGTACGCCCAAGAGATATTTGGAAATCAGTGGATCCATTCTT TCCTGTCCGCAGCCATCTCTTACCTCATCATCTGCTTCGGCCCACGCAAG CACATCGCCACCCtagtcttcctcttcaccatGACCTACATGAGCCTCAG CCACCTCTACCGCCTTTACGTTGAAtgttcccctctccgcccacaGGGCC GTCGATCCTGACTCCTCCAGGAAACATGACAAGCCTTATACATGAAAAGC ATTTGGATGCTCtggtctccttctttcaaaGCTGGGTGCCACTGGCGGAC AAGACGGTGTACCTGACCGTGCCCGGGATGGACCAGGCCCTAGCCCCGCT GGGCGAGACTTTGGGCTTCGATATCGGGATGCTGAAGGTAATCCATGTTC CTTGCCTATCCGCTCTCGGGCATCCTCACCCTTTTGCCATCCACCAACGC CAAAcacgctttctccctcctgctggGACTGTGGTACGCCCAAGAGATAT TTGGAAATCAGTGGATCCATTCTTTCCTGTCCGCAGCCATCTCTTACCTC ATCATCTGCTTCGGCCCACGCAAGCACATCGCCACCCtagtcttcctctt caccatGACCTACATGAGCCTCAGCCACCTCTACCGCCTTTACGTTGAAt gttcccctctccgcccacaGGGCCGTCGATCCTGACTCCTCCAGGAAACA TGACAAGCCTTATACATGAAAAGCATTTGGATGCTCtggtctccttcttt caaaGCTGGGTGCCACTGGCGGACAAGACGGTGTACCTGACCGTGCCCGG GATGGACCAGGCCCTAGCCCCGCTGGGCGAGACTTTGGGCTTCGATATCG GGATGCTGAAGGTAATCCATGTTCCTTGCCTATCCGCTCTCGGGCATCCT CACCCTTTTGCCATCCACCAACGCCAAAcacgctttctccctcctgctgg GACTGTGGTACGCCCAAGAGATATTTGGAAATCAGTGGATCCATTCTTTC CTGTCCGCAGCCATCTCTTACCTCATCATCTGCTTCGGCCCACGCAAGCA CATCGCCACCCtagtcttcctcttcaccatGACCTACATGAGCCTCAGCC ACCTCTACCGCCTTTACGTTGA back to top
|