EWM26886.1, cds3788 (CDS) Nannochloropsis gaditana

Overview
NameEWM26886.1
Unique Namecds3788
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:76611..76828 +
Alignment locationCM002462.1:76982..77100 +
Alignment locationCM002462.1:77314..77450 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26886.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101541g1.2983.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:76611..76828 +
CM002462.1supercontigCM002462.1:76982..77100 +
CM002462.1supercontigCM002462.1:77314..77450 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26886.1 vs. NCBI_GenBank
Match: gi|585109004|gb|EWM26886.1| (hypothetical protein Naga_101541g1 [Nannochloropsis gaditana])

HSP 1 Score: 309.301 bits (791), Expect = 2.363e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:    1 MFPSPPTGPSILTPPGNMTSLIHEKHLDALVSFFQSWVPLADKTVYLTVPGMDQALAPLGETLGFDIGMLKVIHVPCLSALGHPHPFAIHQRQTRFLPPAGTVVRPRDIWKSVDPFFPVRSHLLPHHLLRPTQAHRHPSLPLHHDLHEPQPPLPPLR 157
            MFPSPPTGPSILTPPGNMTSLIHEKHLDALVSFFQSWVPLADKTVYLTVPGMDQALAPLGETLGFDIGMLKVIHVPCLSALGHPHPFAIHQRQTRFLPPAGTVVRPRDIWKSVDPFFPVRSHLLPHHLLRPTQAHRHPSLPLHHDLHEPQPPLPPLR
Sbjct:    1 MFPSPPTGPSILTPPGNMTSLIHEKHLDALVSFFQSWVPLADKTVYLTVPGMDQALAPLGETLGFDIGMLKVIHVPCLSALGHPHPFAIHQRQTRFLPPAGTVVRPRDIWKSVDPFFPVRSHLLPHHLLRPTQAHRHPSLPLHHDLHEPQPPLPPLR 157
The following BLAST results are available for this feature:
BLAST of EWM26886.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109004|gb|EWM26886.1|2.363e-106100.00hypothetical protein Naga_101541g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3797rna3797Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications