rna3795, rna3795 (mRNA) Nannochloropsis gaditana

Overview
Namerna3795
Unique Namerna3795
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length523
Alignment locationCM002462.1:72579..73622 -

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Properties
Property NameValue
Productplastidic atp adp
Orig transcript idgnl|cribi|Naga_101556g1.8544.mrna
Orig protein idgnl|cribi|Naga_101556g1.8544
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:72579..73622 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101556g1gene3653Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3795rna3795-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26887.1cds3786Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3795 ID=rna3795|Name=rna3795|organism=Nannochloropsis gaditana|type=mRNA|length=523bp
CTCAGGTCCTTGCTAAGCGGTATTTCACCGCCTTGTACCCCCATGATCCG
GCCCGCGTGACCGATGCCTTCGCCTCTTTCATGGGCCTCTTTGGACAGGT
GACCAACGGCATTTCTTTCCTGTTCTCTCTTACGGGGACCTCCTTCGTCA
TCCGCCGTCTCGGCCTTTATCGGTCTTTGGTCGCTTTTCCCCTTCTTTGC
ATGGGGGCGATCGCGGTGGCCATGTTGATGCCCGATTTATGGGTGGTGTT
TGCCTGCATGATGTTCTTGAAAGCCCTCTCCTACTCGTTGAACAACCCGT
GCAAAGAGATGCTGTACCAGCCCACCAACACCGCTGTTAAGTTCAAGAGC
AAGAGCTGGATCGATATCTTCGGACAGCGGGGGGCCAAAGCTGCGGGTTC
GGTCGTGACGAACGCTTTGTCCGACTCGGTTCGGAGTTTGGTGTTTTACG
GAGGCCTGATCTCGGTCTTCATATCCGCCTTCCTGGTGTGGGTGGCTGCG
TGGATGGGGACCCGTTTCGAGGA
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protein sequence of rna3795

>rna3795-protein ID=rna3795-protein|Name=rna3795|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MANIRRWLRTQAGQGGIKEKGASSFFFPSRREQLSLPSMPTPASKSEQHK
ERRRIPNAPQIPMPKVVTKILAGGADPSLEAEKAPVTGEWQKIPHEEDAA
ASSHSPSSFFHGILVTLYGEMAPRDLVRVCWFAGTLFFIIGGYWLLRSLK
VRGKEGWRGGEEEGLVRV
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mRNA from alignment at CM002462.1:72579..73622-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3795 ID=rna3795|Name=rna3795|organism=Nannochloropsis gaditana|type=mRNA|length=1044bp|location=Sequence derived from alignment at CM002462.1:72579..73622- (Nannochloropsis gaditana)
ATGGCCAATATGTGGGTTGACTTGACTCCGTCGCTGTTGCTGGCAGCTTC
TTCAGACGGCGAGAGCTGCCATGCTTCTCCAAAACCAGAAACTAAACTAC
ACCCCTCACATCCACGCACGACCTACATTCCCCCCTCTACATTTACGCAC
GCATCAAGAAGACGTTGGTTGCGGACCCAAGCAGGGCAAGGAGGCATAAA
GGAGAAGGGCGCGTCTAGTTTTTTTTTTCCTTCTCGTCGCGAGCAGCTTT
CCCTCCCTAGCATGCCTACTCCAGCGAGTAAAAGTGAACAACATAAAGAA
CGACGCCGCATTCCCAATGCCCCACAAATACCAATGCCTAAGGTCGTTAC
CAAAATCTTAGCGGGGGGCGCAGACCCCAGCCTTGAGGCCGAAAAGGTAA
GAAGAAGCTGGGTACGAAAGGAGTGTGGAACTGTGCGCCGACGGCGGGGG
AAAGCGGGGTGTACGGGCATTGGGATGAAAGGGCTGTATCTACGCAGGTC
CCTCCTTTGTACCTTCCCAAAACGGCGAGCCTGCGCTCTGCAGTGCCGGA
GGCAATGTCCGGCATGTGCGTGGGCGCACATCAGTTCTCCCAATGTCCTC
CCGAGCACTGCTTTGCGATTCACGTTCCCTCATGCGTCGTGCATCCCCAC
GCGGCCCCCGCCTAACGCAATGGCTCGCAATGCACCTCCATCTTTGTTCA
TTTCATTCTTTTCGGCCCTGTCCACCCTCGGCTCCCTCCTCCCTCCTCCT
CATTCCTCTGACTCCTTCCTTGATGTCCTGGCCCAGGCACCCGTCACGGG
GGAATGGCAAAAAATTCCCCACGAAGAGGACGCCGCGGCTTCCTCCCACT
CTCCTTCCTCCTTCTTCCACGGGATATTGGTGACCTTGTACGGAGAAATG
GCGCCCAGGGACTTGGTACGCGTCTGCTGGTTCGCCGGGACGCTCTTTTT
CATCATTGGGGGCTACTGGCTCCTCCGCTCCCTCAAGGTGAGGGGGAAGG
AGGGATGGAGGGGAGGGGAGGAGGAAGGATTAGTACGGGTCTGA
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Coding sequence (CDS) from alignment at CM002462.1:72579..73622-

>rna3795 ID=rna3795|Name=rna3795|organism=Nannochloropsis gaditana|type=CDS|length=1521bp|location=Sequence derived from alignment at CM002462.1:72579..73622- (Nannochloropsis gaditana)
GCACCCGTCACGGGGGAATGGCAAAAAATTCCCCACGAAGAGGACGCCGC
GGCTTCCTCCCACTCTCCTTCCTCCTTCTTCCACGGGATATTGGTGACCT
TGTACGGAGAAATGGCGCCCAGGGACTTGGTACGCGTCTGCTGGTTCGCC
GGGACGCTCTTTTTCATCATTGGGGGCTACTGGCTCCTCCGCTCCCTCAA
GGTGAGGGGGAAGGAGGGATGGAGGGGAGGGGAGGAGGAAGGATTAGTAC
GGGTCTGAAAGACGTTGGTTGCGGACCCAAGCAGGGCAAGGAGGCATAAA
GGAGAAGGGCGCGTCTAGTTTTTTTTTTCCTTCTCGTCGCGAGCAGCTTT
CCCTCCCTAGCATGCCTACTCCAGCGAGTAAAAGTGAACAACATAAAGAA
CGACGCCGCATTCCCAATGCCCCACAAATACCAATGCCTAAGGTCGTTAC
CAAAATCTTAGCGGGGGGCGCAGACCCCAGCCTTGAGGCCGAAAAGATGG
CCAATATGCACCCGTCACGGGGGAATGGCAAAAAATTCCCCACGAAGAGG
ACGCCGCGGCTTCCTCCCACTCTCCTTCCTCCTTCTTCCACGGGATATTG
GTGACCTTGTACGGAGAAATGGCGCCCAGGGACTTGGTACGCGTCTGCTG
GTTCGCCGGGACGCTCTTTTTCATCATTGGGGGCTACTGGCTCCTCCGCT
CCCTCAAGGTGAGGGGGAAGGAGGGATGGAGGGGAGGGGAGGAGGAAGGA
TTAGTACGGGTCTGAAAGACGTTGGTTGCGGACCCAAGCAGGGCAAGGAG
GCATAAAGGAGAAGGGCGCGTCTAGTTTTTTTTTTCCTTCTCGTCGCGAG
CAGCTTTCCCTCCCTAGCATGCCTACTCCAGCGAGTAAAAGTGAACAACA
TAAAGAACGACGCCGCATTCCCAATGCCCCACAAATACCAATGCCTAAGG
TCGTTACCAAAATCTTAGCGGGGGGCGCAGACCCCAGCCTTGAGGCCGAA
AAGATGGCCAATATGCACCCGTCACGGGGGAATGGCAAAAAATTCCCCAC
GAAGAGGACGCCGCGGCTTCCTCCCACTCTCCTTCCTCCTTCTTCCACGG
GATATTGGTGACCTTGTACGGAGAAATGGCGCCCAGGGACTTGGTACGCG
TCTGCTGGTTCGCCGGGACGCTCTTTTTCATCATTGGGGGCTACTGGCTC
CTCCGCTCCCTCAAGGTGAGGGGGAAGGAGGGATGGAGGGGAGGGGAGGA
GGAAGGATTAGTACGGGTCTGAAAGACGTTGGTTGCGGACCCAAGCAGGG
CAAGGAGGCATAAAGGAGAAGGGCGCGTCTAGTTTTTTTTTTCCTTCTCG
TCGCGAGCAGCTTTCCCTCCCTAGCATGCCTACTCCAGCGAGTAAAAGTG
AACAACATAAAGAACGACGCCGCATTCCCAATGCCCCACAAATACCAATG
CCTAAGGTCGTTACCAAAATCTTAGCGGGGGGCGCAGACCCCAGCCTTGA
GGCCGAAAAGATGGCCAATAT
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Synonyms
Publications