EWM26887.1, cds3786 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26887.1 vs. NCBI_GenBank
Match: gi|585109007|gb|EWM26887.1| (plastidic atp adp [Nannochloropsis gaditana]) HSP 1 Score: 342.043 bits (876), Expect = 4.301e-119 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query: 1 MANIRRWLRTQAGQGGIKEKGASSFFFPSRREQLSLPSMPTPASKSEQHKERRRIPNAPQIPMPKVVTKILAGGADPSLEAEKAPVTGEWQKIPHEEDAAASSHSPSSFFHGILVTLYGEMAPRDLVRVCWFAGTLFFIIGGYWLLRSLKVRGKEGWRGGEEEGLVRV 168
MANIRRWLRTQAGQGGIKEKGASSFFFPSRREQLSLPSMPTPASKSEQHKERRRIPNAPQIPMPKVVTKILAGGADPSLEAEKAPVTGEWQKIPHEEDAAASSHSPSSFFHGILVTLYGEMAPRDLVRVCWFAGTLFFIIGGYWLLRSLKVRGKEGWRGGEEEGLVRV
Sbjct: 1 MANIRRWLRTQAGQGGIKEKGASSFFFPSRREQLSLPSMPTPASKSEQHKERRRIPNAPQIPMPKVVTKILAGGADPSLEAEKAPVTGEWQKIPHEEDAAASSHSPSSFFHGILVTLYGEMAPRDLVRVCWFAGTLFFIIGGYWLLRSLKVRGKEGWRGGEEEGLVRV 168
BLAST of EWM26887.1 vs. NCBI_GenBank
Match: gi|298705965|emb|CBJ29086.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 62.7734 bits (151), Expect = 1.762e-8 Identity = 43/113 (38.05%), Postives = 55/113 (48.67%), Query Frame = 0
Query: 38 SMPTPASKSEQHKERRRIPNAPQIPMPKVVTKILAGGADPSLEAEKAPVTGEWQKIPHEEDAAASSHSPSSFFHGILVTLYGEMAPRDLVRVCWFAGTLFFIIGGYWLLRSLK 150
++P+ + E + P AP V + P LE+EK WQK+ D +P F I LYG++ D +RV W AGTLFFIIGGYWLLRSLK
Sbjct: 37 TLPSTTAAIVVDAEGQSAPEAP------VASAEYDAKGRPYLESEK------WQKMGGTGD-----DTPGVFAR-IFSGLYGDLPMSDRLRVAWLAGTLFFIIGGYWLLRSLK 131
BLAST of EWM26887.1 vs. NCBI_GenBank
Match: gi|676377923|ref|XP_009032240.1| (hypothetical protein AURANDRAFT_60513 [Aureococcus anophagefferens] >gi|323456705|gb|EGB12571.1| hypothetical protein AURANDRAFT_60513 [Aureococcus anophagefferens]) HSP 1 Score: 62.3882 bits (150), Expect = 2.354e-8 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0
Query: 78 SLEAEKAPVTGEWQKIPHEEDAAASSHSP---SSFFHGILVTLYGEMAPRDLVRVCWFAGTLFFIIGGYWLLRSLK 150
S E E+ T WQ + E ++A S +P S+F + LYG+M+ + +R+ W + TLFFIIGGYWLLRSLK
Sbjct: 7 SGEPEELKATA-WQGM--ELESATSPTAPRAADSYFEEVFTRLYGKMSFEEKLRLIWLSSTLFFIIGGYWLLRSLK 79 The following BLAST results are available for this feature:
BLAST of EWM26887.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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