EWM26939.1, cds3735 (CDS) Nannochloropsis gaditana

Overview
NameEWM26939.1
Unique Namecds3735
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1110248..1110305 +
Alignment locationCM002461.1:1110461..1110837 +
Alignment locationCM002461.1:1111009..1111446 +

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Properties
Property NameValue
End range.
End range1111446
Protein idEWM26939.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101015g2.10293.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1110248..1110305 +
CM002461.1supercontigCM002461.1:1110461..1110837 +
CM002461.1supercontigCM002461.1:1111009..1111446 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26939.1 vs. NCBI_GenBank
Match: gi|585109079|gb|EWM26939.1| (hypothetical protein Naga_101015g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 
Query:    1 MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQSQGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLGLLNMSGDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQATSLMPGRPSHDTVGSMLYPPSSFPASYPSALPSFASSERCPLGGLGSTHPHELPPHHSQQQQQPSLSPNTHSPFHLLNSDRPVHHSIHLAQQMTASPASLPPSLPPSLPASSPSPYPDMHGLCTSAVFASAGVPLTPATRTKLGRC 291
            MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQSQGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLGLLNMSGDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQATSLMPGRPSHDTVGSMLYPPSSFPASYPSALPSFASSERCPLGGLGSTHPHELPPHHSQQQQQPSLSPNTHSPFHLLNSDRPVHHSIHLAQQMTASPASLPPSLPPSLPASSPSPYPDMHGLCTSAVFASAGVPLTPATRTKLGRC
Sbjct:    1 MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQSQGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLGLLNMSGDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQATSLMPGRPSHDTVGSMLYPPSSFPASYPSALPSFASSERCPLGGLGSTHPHELPPHHSQQQQQPSLSPNTHSPFHLLNSDRPVHHSIHLAQQMTASPASLPPSLPPSLPASSPSPYPDMHGLCTSAVFASAGVPLTPATRTKLGRC 291
[Close]
BLAST of EWM26939.1 vs. NCBI_GenBank
Match: gi|553188618|ref|XP_005854828.1| (hypothetical protein NGA_0376900 [Nannochloropsis gaditana CCMP526] >gi|422294230|gb|EKU21530.1| hypothetical protein NGA_0376900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 273.092 bits (697), Expect = 1.158e-88
Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0 
Query:    1 MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQSQGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLGLLNMSGDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQAT 146
            MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQSQGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLG LNMSGDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQA 
Sbjct:    1 MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQSQGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLGRLNMSGDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQAV 146
The following BLAST results are available for this feature:
BLAST of EWM26939.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585109079|gb|EWM26939.1|0.000e+0100.00hypothetical protein Naga_101015g2, partial [Nanno... [more]
gi|553188618|ref|XP_005854828.1|1.158e-8898.63hypothetical protein NGA_0376900 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3744rna3744Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications