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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101015g2.10293.mrna |
| Orig protein id | gnl|cribi|Naga_101015g2.10293 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1109640..1111446 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3744 ID=rna3744|Name=rna3744|organism=Nannochloropsis gaditana|type=mRNA|length=1044bp
TGACTCGTCGTTCTAAGGGCCTGGCCTCCTTTTGCCCTCCCCAGTGCTGC
TCCCTGCCCTGACGGAGCGGCAACGGCGGGAGGAAGGGGGGGAGGACATG
GAGACCGAGAGCAGCAGTCGCAGGGACACCCGGAGCAGCACAAGGAAGGG
GAAAGAAAGCAGTAACGCGCCCGGATTAAGTGACATAAGGACGAATACCA
AGGAGGATTTAACGGCGCTGATTGGGTAAGAAGGGAAGGAGGGAGGGGGG
GAAGGGGGGGGGGAGGGCGTGGCCTATCCGTCCGTCCACGGGGGCTCGTA
GGGCTGAGAGCGTGCACCGTCCTCCTCTTGCCATGCTTTGTCTCACAAAC
GTCCGCCCCCTCCATGCGCGTATGCCTGGTTTCCACAGGCTCCTGCGGCC
GGGATCGCGGGCGTAGGGGGGGGCGAGAAGGGCGTGATGAGGAATGCTTG
GCGATGGATAGGGAAGGGGCTCTTGAGAGGACACAGGAGGGGGAGGACGA
GGAGGAAAAGGAAGAAGAGCCCGAATGCAGGTGCTCAGTACGGGGAAGGG
AACAGTGTGAGTGGGCTGGTGGGGGGGGGAGGGGGAAGGACAGAGCAGGC
ATTGTGTCGAGCCACAGGGAGATATTGGACGAGGAGGCGAAAGGAATGTG
CGAAATTGGGACGGAGACAGGGAGGGAAGGACTTTATGGGTATTGAGGCA
AAGAGTACGGGAGTGGGGGCAAGGGGGAAAGAAAAGCAGGTGTCTGTTGG
AGGGACGGCAAAGGTCTCTACAAGCCGTGAGAGCGAAAATGCGCAAGAGA
AAGGAAAAGGCATGAAATACAGCGAAATGGCCAGGCGCAGGAGGGTGGTG
GCGCGTTGGTTTGTTGTCTGGACGAAAAACAAAAGGTGATGTGTCTTATA
CTGTGAAGTTGGCAGGGCAAGAGATACACGTTGGTCCCAGAGATCGCAGC
AGTCACGGCGAGTGGAAGGGTCCATGTCTCAAAAAAAAAGTAAATTAGTT
GCAGTGTTTTGCCGAAAAAGAAAAATTAAGAAAGGTGAATATCC back to topprotein sequence of rna3744 >rna3744-protein ID=rna3744-protein|Name=rna3744|organism=Nannochloropsis gaditana|type=polypeptide|length=291bp
MSGPSGSRQPPQTLEETHIGGGKRRRGPMPEDPSGQLHMQEPGAQHVQQS
QGLYRNATCPEYNWPRSSHDAGGGGGGGGKASDLTGRTVDGSHLGLLNMS
GDHVLPHSMGREGRPNRSGGGEEYGWGSSTQESFPPPHPRHAGQATSLMP
GRPSHDTVGSMLYPPSSFPASYPSALPSFASSERCPLGGLGSTHPHELPP
HHSQQQQQPSLSPNTHSPFHLLNSDRPVHHSIHLAQQMTASPASLPPSLP
PSLPASSPSPYPDMHGLCTSAVFASAGVPLTPATRTKLGRC back to topmRNA from alignment at CM002461.1:1109640..1111446+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3744 ID=rna3744|Name=rna3744|organism=Nannochloropsis gaditana|type=mRNA|length=1807bp|location=Sequence derived from alignment at CM002461.1:1109640..1111446+ (Nannochloropsis gaditana)
GTGGGGATTGCGTCCCATGGTTGTGCGATGTCCGGGGTCGGAGTCTCGCC
GACGCCACAGACGCACGTCGAATCCTCCATAATCTATCTGTCTTCGGGGG
GGGTCGCGTTTCTGACCGACTTTGGTGCAGGTTTTCTGGTGGAGAAACCT
ACCACATGTCATCCATCTGTCGGTTTTGTCCGCGTCATACCGCGCGAGGC
CCATGGTAGGGCTCGTTTGGGTTACTTTcaggggagaaaggcgtACCCGC
AGGAGAGGCATAGAAGTTCAAGTACTTTTCTTATAGGCGacgggaggacg
acaaagCAGTCCAGCCTCCTGAATGTTGTTCGCGTTTTCATGCGCCGAAT
GCCACGGTGATGTTATGGCTCCACTTTCCATGTTCACGGACTACCAAGCC
GCACGATCAGTGTCGTGGCATTTTGGGTCCTGGTTTTTCCTTACAATATC
AACTTCCCTTTTTCTATTCAGGAAAGGCGAGGTGGTATCCCACAAGCAAA
CCCCTCATCTTGCCGTCGAGACGAGTTTATTCCTTCATCACCGCACACGT
TTGCTCATGCACGTGTTTCACGGCAATTTGTAGAGGTTATTTTTGAGACC
TAATTTTCATGTCTGGCCCCTCCGGCTCCCGTCAACCCCCTCAGACGTTG
GAAGAAACGCATATTGGTGCGTAAATAGCTTTTGTCTCCGGGCATACAGC
TTGCCACTCTTGTACTTTCCACGGTCATATCTCTGTGAACTTTCTGTTTA
AGGATGCGTATCCTGTGCTTTCATGTATTCTCTGACGTTTTTATCATGCT
TGTgtccgcttttcctcccaggcGGTGGCAAACGGAGGCGCGGCCCCATG
CCTGAAGACCCGTCCGGACAACTTCATATGCAAGAACCCGGTGCACAGCA
TGTGCAGCAAAGTCAAGGATTGTACAGGAACGCAACGTGCCCCGAGTACA
ACTGGCCCCGTTCATCCCAtgatgcgggaggaggaggaggcgggggaggg
aaagcgagcgATTTGACGGGCCGGACCGTTGACGGCTCGCACTTAGGTCT
GCTGAATATGTCAGGGGATCATGTCTTGCCGCACTCgatgggaagagaag
ggaggccgaatcgaagcgggggaggagaggagtaTGGATGGGGGTCTTCC
ACGCAGGAaagcttcccgcctcctcacccccGCCACGCCGGGCAGGCGGT
AGGTTCGACGGCCGAGACCCCATCGCGCGgcgtcggggaggggggaaggg
acgaggtTGAATTATGGCGCGAACGACGTGGTGATGGGGTCGTATGTGGG
AAATCTCGGCTGCGGTCGCAGCTgccttacctcctccccccccgtccctc
ctcctcaccctccgcACAGACCTCGCTGATGCCAGGAAGGCCCTCCCACG
ACACGGTCGGCTCCATGCTCtacccaccctcctccttccccgcctcctac
ccctccgccctccccagcttTGCCTCGTCGGAGCGTTGCCCTCTGGGCGG
GCTGGGCAGCACGCATCCTCACGAACTTCCGCCCCACCATtcccagcaac
aacagcagccctccctgtctcccaaCACGcactcccccttccacttgCTC
AATTCCGATCGCCCCGTGCATCACAGCATCCATCTAGCCCAGCAGATGAC
CGcctcgccggcctccctcccgccctccctcccgccctccctcccggctt
cctccccctcgccctaCCCTGACATGCATGGGCTGTGCACGTCAGCTGTC
TTCGCGTCAGCAGGTGTGCCGTTGACGCCAGCCACGAGGACCAAGCTGGG
TAGGTGC back to topCoding sequence (CDS) from alignment at CM002461.1:1109640..1111446+ >rna3744 ID=rna3744|Name=rna3744|organism=Nannochloropsis gaditana|type=CDS|length=2619bp|location=Sequence derived from alignment at CM002461.1:1109640..1111446+ (Nannochloropsis gaditana)
ATGTCTGGCCCCTCCGGCTCCCGTCAACCCCCTCAGACGTTGGAAGAAAC
GCATATTGgcGGTGGCAAACGGAGGCGCGGCCCCATGCCTGAAGACCCGT
CCGGACAACTTCATATGCAAGAACCCGGTGCACAGCATGTGCAGCAAAGT
CAAGGATTGTACAGGAACGCAACGTGCCCCGAGTACAACTGGCCCCGTTC
ATCCCAtgatgcgggaggaggaggaggcgggggagggaaagcgagcgATT
TGACGGGCCGGACCGTTGACGGCTCGCACTTAGGTCTGCTGAATATGTCA
GGGGATCATGTCTTGCCGCACTCgatgggaagagaagggaggccgaatcg
aagcgggggaggagaggagtaTGGATGGGGGTCTTCCACGCAGGAaagct
tcccgcctcctcacccccGCCACGCCGGGCAGGCGACCTCGCTGATGCCA
GGAAGGCCCTCCCACGACACGGTCGGCTCCATGCTCtacccaccctcctc
cttccccgcctcctacccctccgccctccccagcttTGCCTCGTCGGAGC
GTTGCCCTCTGGGCGGGCTGGGCAGCACGCATCCTCACGAACTTCCGCCC
CACCATtcccagcaacaacagcagccctccctgtctcccaaCACGcactc
ccccttccacttgCTCAATTCCGATCGCCCCGTGCATCACAGCATCCATC
TAGCCCAGCAGATGACCGcctcgccggcctccctcccgccctccctcccg
ccctccctcccggcttcctccccctcgccctaCCCTGACATGCATGGGCT
GTGCACGTCAGCTGTCTTCGCGTCAGCAGGTGTGCCGTTGACGCCAGCCA
CGAGGACCAAGCTGGGTAGGTGCATGTCTGGCCCCTCCGGCTCCCGTCAA
CCCCCTCAGACGTTGGAAGAAACGCATATTGgcGGTGGCAAACGGAGGCG
CGGCCCCATGCCTGAAGACCCGTCCGGACAACTTCATATGCAAGAACCCG
GTGCACAGCATGTGCAGCAAAGTCAAGGATTGTACAGGAACGCAACGTGC
CCCGAGTACAACTGGCCCCGTTCATCCCAtgatgcgggaggaggaggagg
cgggggagggaaagcgagcgATTTGACGGGCCGGACCGTTGACGGCTCGC
ACTTAGGTCTGCTGAATATGTCAGGGGATCATGTCTTGCCGCACTCgatg
ggaagagaagggaggccgaatcgaagcgggggaggagaggagtaTGGATG
GGGGTCTTCCACGCAGGAaagcttcccgcctcctcacccccGCCACGCCG
GGCAGGCGACCTCGCTGATGCCAGGAAGGCCCTCCCACGACACGGTCGGC
TCCATGCTCtacccaccctcctccttccccgcctcctacccctccgccct
ccccagcttTGCCTCGTCGGAGCGTTGCCCTCTGGGCGGGCTGGGCAGCA
CGCATCCTCACGAACTTCCGCCCCACCATtcccagcaacaacagcagccc
tccctgtctcccaaCACGcactcccccttccacttgCTCAATTCCGATCG
CCCCGTGCATCACAGCATCCATCTAGCCCAGCAGATGACCGcctcgccgg
cctccctcccgccctccctcccgccctccctcccggcttcctccccctcg
ccctaCCCTGACATGCATGGGCTGTGCACGTCAGCTGTCTTCGCGTCAGC
AGGTGTGCCGTTGACGCCAGCCACGAGGACCAAGCTGGGTAGGTGCATGT
CTGGCCCCTCCGGCTCCCGTCAACCCCCTCAGACGTTGGAAGAAACGCAT
ATTGgcGGTGGCAAACGGAGGCGCGGCCCCATGCCTGAAGACCCGTCCGG
ACAACTTCATATGCAAGAACCCGGTGCACAGCATGTGCAGCAAAGTCAAG
GATTGTACAGGAACGCAACGTGCCCCGAGTACAACTGGCCCCGTTCATCC
CAtgatgcgggaggaggaggaggcgggggagggaaagcgagcgATTTGAC
GGGCCGGACCGTTGACGGCTCGCACTTAGGTCTGCTGAATATGTCAGGGG
ATCATGTCTTGCCGCACTCgatgggaagagaagggaggccgaatcgaagc
gggggaggagaggagtaTGGATGGGGGTCTTCCACGCAGGAaagcttccc
gcctcctcacccccGCCACGCCGGGCAGGCGACCTCGCTGATGCCAGGAA
GGCCCTCCCACGACACGGTCGGCTCCATGCTCtacccaccctcctccttc
cccgcctcctacccctccgccctccccagcttTGCCTCGTCGGAGCGTTG
CCCTCTGGGCGGGCTGGGCAGCACGCATCCTCACGAACTTCCGCCCCACC
ATtcccagcaacaacagcagccctccctgtctcccaaCACGcactccccc
ttccacttgCTCAATTCCGATCGCCCCGTGCATCACAGCATCCATCTAGC
CCAGCAGATGACCGcctcgccggcctccctcccgccctccctcccgccct
ccctcccggcttcctccccctcgccctaCCCTGACATGCATGGGCTGTGC
ACGTCAGCTGTCTTCGCGTCAGCAGGTGTGCCGTTGACGCCAGCCACGAG
GACCAAGCTGGGTAGGTGC back to top
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