EWM26993.1, cds3680 (CDS) Nannochloropsis gaditana

Overview
NameEWM26993.1
Unique Namecds3680
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:985436..985750 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26993.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101275g2.3016.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:985436..985750 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26993.1 vs. NCBI_GenBank
Match: gi|585109162|gb|EWM26993.1| (hypothetical protein Naga_101275g2 [Nannochloropsis gaditana])

HSP 1 Score: 206.068 bits (523), Expect = 3.259e-67
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 MPPILLEDAAIDALFTEVEACAREDDGEVHPLPVRLLQDSVSGEMVALPPAIAQAGDESYFFERIAATTTPFGLPVPGARELLMERYLEIEALLDDMVRDGRST 104
            MPPILLEDAAIDALFTEVEACAREDDGEVHPLPVRLLQDSVSGEMVALPPAIAQAGDESYFFERIAATTTPFGLPVPGARELLMERYLEIEALLDDMVRDGRST
Sbjct:    1 MPPILLEDAAIDALFTEVEACAREDDGEVHPLPVRLLQDSVSGEMVALPPAIAQAGDESYFFERIAATTTPFGLPVPGARELLMERYLEIEALLDDMVRDGRST 104
The following BLAST results are available for this feature:
BLAST of EWM26993.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109162|gb|EWM26993.1|3.259e-67100.00hypothetical protein Naga_101275g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3689rna3689Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications