EWM27032.1, cds3614 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|585109206|gb|EWM27032.1| (phosphatidate cytidylyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0 Query: 1 MTYVGQRKGLELIVIGAQAGAYNEVAKLLDRGLSLPSSLPSRWLWFVLAFNTGHSWAYGETLMPSLLPSWLHWYWPGRRLVQYLAYVCLLGGSITPKGPGEQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTMLGPAPDDVPRALGGLLSLSDWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRARE 289 MTYVGQRKGLELIVIGAQAGAYNEVAKLLDRGLSLPSSLPSRWLWFVLAFNTGHSWAYGETLMPSLLPSWLHWYWPGRRLVQYLAYVCLLGGSITPKGPGEQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTMLGPAPDDVPRALGGLLSLSDWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRARE Sbjct: 1 MTYVGQRKGLELIVIGAQAGAYNEVAKLLDRGLSLPSSLPSRWLWFVLAFNTGHSWAYGETLMPSLLPSWLHWYWPGRRLVQYLAYVCLLGGSITPKGPGEQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTMLGPAPDDVPRALGGLLSLSDWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRARE 289
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|1109237345|ref|XP_019193328.1| (PREDICTED: phosphatidate cytidylyltransferase 1-like [Ipomoea nil]) HSP 1 Score: 143.28 bits (360), Expect = 8.596e-36 Identity = 94/212 (44.34%), Postives = 112/212 (52.83%), Query Frame = 0 Query: 104 QRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLL---------RTMLG-------PAPDDVPR--ALGGLLSLS-----------DWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPR 286 Q Q A H L L+ S VA + + G+ F+L L+ VND+ AYL+G GKTPL KLSPKK+WEGF GA+V TM SA LL LL R L P P P +LG LL W +L L FAS AP GG AS KRA KDFGDSIPGHGG DR+DCQ+ M+ FSY++L A P+ Sbjct: 227 QYQFGQFAWTHMILILVFTQSSFTVANIFE-GIFWFILPASLIAVNDVAAYLIGFFFGKTPLIKLSPKKTWEGFIGASVATMISAFLLANLLGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLGSLLPNEFPWKEISVLPVQWHSLCLGLFASVIAPFGGFFASGFKRAFKFKDFGDSIPGHGGFTDRMDCQMVMAIFSYIYLQSFALPQ 437
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|1072922490|ref|XP_018471886.1| (PREDICTED: phosphatidate cytidylyltransferase 2 isoform X2 [Raphanus sativus]) HSP 1 Score: 139.813 bits (351), Expect = 2.506e-35 Identity = 86/213 (40.38%), Postives = 111/213 (52.11%), Query Frame = 0 Query: 104 QRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTML------------------GPAPDDVPRALGGLLSL-----------SDWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRA 287 + Q + A H L ++ S VA + + G+ FLL L+VVNDI AY+ G G+TPL KLSPKK+WEGF GA++ TM SA LL ++ L GP AL G +S W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ P++ Sbjct: 117 KYQFSQYAWTHMILIVVFTQSSFTVANIFE-GIFWFLLPASLIVVNDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASITTMISAFLLANIMGRFLWLTCPREDLSTGWLQCDPGPLFKQETHALPGWISNWLPWKEISVLPVQWHALCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPQS 328
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|474167021|gb|EMS57464.1| (Phosphatidate cytidylyltransferase [Triticum urartu] >gi|475549872|gb|EMT11339.1| Phosphatidate cytidylyltransferase [Aegilops tauschii]) HSP 1 Score: 137.117 bits (344), Expect = 2.837e-35 Identity = 87/198 (43.94%), Postives = 109/198 (55.05%), Query Frame = 0 Query: 106 QVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLL---RTMLGPAPDDVPRAL----GGLLS-----LSD-----WQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPR 286 Q A H L + S VA + + G+ FLL L+V+NDI AYL G LG+TPL KLSPKK+WEGF GA+V T+ SA LL ++ + + P D L G + L D W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ SP Sbjct: 30 QFKQYAWTHMILLTVFAQSSFTVANIFE-GMFWFLLPASLIVINDIAAYLFGFFLGRTPLIKLSPKKTWEGFIGASVTTIISAFLLANVMGHFQWLTCPRKDLSTGWLTCDPGSMFKPEHYFLGDWVPQWWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFISPH 226
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|1072922484|ref|XP_018471883.1| (PREDICTED: phosphatidate cytidylyltransferase 2 isoform X1 [Raphanus sativus] >gi|1072922486|ref|XP_018471884.1| PREDICTED: phosphatidate cytidylyltransferase 2 isoform X1 [Raphanus sativus] >gi|1072922488|ref|XP_018471885.1| PREDICTED: phosphatidate cytidylyltransferase 2 isoform X1 [Raphanus sativus]) HSP 1 Score: 139.428 bits (350), Expect = 9.195e-35 Identity = 86/216 (39.81%), Postives = 112/216 (51.85%), Query Frame = 0 Query: 101 EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTML------------------GPAPDDVPRALGGLLSL-----------SDWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRA 287 + + Q + A H L ++ S VA + + G+ FLL L+VVNDI AY+ G G+TPL KLSPKK+WEGF GA++ TM SA LL ++ L GP AL G +S W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ P++ Sbjct: 172 KMYKYQFSQYAWTHMILIVVFTQSSFTVANIFE-GIFWFLLPASLIVVNDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASITTMISAFLLANIMGRFLWLTCPREDLSTGWLQCDPGPLFKQETHALPGWISNWLPWKEISVLPVQWHALCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPQS 386
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|923743788|ref|XP_013672062.1| (PREDICTED: phosphatidate cytidylyltransferase 2 [Brassica napus] >gi|923743790|ref|XP_013672063.1| PREDICTED: phosphatidate cytidylyltransferase 2 [Brassica napus] >gi|674954675|emb|CDX79148.1| BnaA01g12150D [Brassica napus]) HSP 1 Score: 139.428 bits (350), Expect = 1.174e-34 Identity = 85/216 (39.35%), Postives = 112/216 (51.85%), Query Frame = 0 Query: 101 EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTML------------------GPAPDDVPRALGGLLSL-----------SDWQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRA 287 + + Q + A H L ++ S VA + + G+ FLL L+V+NDI AY+ G G+TPL KLSPKK+WEGF GA++ TM SA LL ++ L GP AL G +S W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ P++ Sbjct: 173 KMYKYQFSQYAWTHMILIVVFTQSSFTVANIFE-GIFWFLLPASLIVINDIFAYICGFFFGRTPLIKLSPKKTWEGFIGASITTMISAFLLANIMGRFLWLTCPREDLSTGWLQCDPGPLFKQETHALPGWISNWLPWKEISVLPVQWHALCLGLFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVPQS 387
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|641859738|gb|KDO78428.1| (hypothetical protein CISIN_1g014818mg [Citrus sinensis]) HSP 1 Score: 135.576 bits (340), Expect = 1.190e-34 Identity = 85/212 (40.09%), Postives = 114/212 (53.77%), Query Frame = 0 Query: 101 EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLL---------RTMLG-------PAPDDVPRA--LGGLLSLSD-------WQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRA 287 + + Q + A H L ++ S VA + + G+ FLL L+V+NDI AY+ G G+TPL KLSPKK+WEGF GA+V T+ SA +L ++ R L P P P + L G L + W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ P++ Sbjct: 23 KMYKYQFSQYAWTHMILIVVFAQSSFTVASIFE-GIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQS 233
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|731366011|ref|XP_010694835.1| (PREDICTED: phosphatidate cytidylyltransferase 1 [Beta vulgaris subsp. vulgaris] >gi|870845325|gb|KMS98073.1| hypothetical protein BVRB_4g095860 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 138.658 bits (348), Expect = 1.821e-34 Identity = 84/207 (40.58%), Postives = 112/207 (54.11%), Query Frame = 0 Query: 101 EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLL---------RT-------------MLGPAPDDVPRALGGLLSLSD-------WQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLF 278 + + Q A H L ++ S VA + + G+ FLL L+V+NDI AYL G GKTPL KLSPKK+WEGF GA++ T+ SA LL ++ RT + P ++PR + L+ D W AL L F+S AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ Sbjct: 171 KMYKYQFGQYAWTHMILIVVFTQSSFTVANIFE-GMFWFLLPASLIVINDIAAYLCGFFFGKTPLIKLSPKKTWEGFIGASIATIISAFLLANVMGRFEWLTCPRTDLSTGWLHCDPGPLFKPEYYNMPRWIANSLAWKDLPVMPVQWHALGLGLFSSIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIY 376
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|641859733|gb|KDO78423.1| (hypothetical protein CISIN_1g014818mg [Citrus sinensis]) HSP 1 Score: 138.272 bits (347), Expect = 1.869e-34 Identity = 85/198 (42.93%), Postives = 111/198 (56.06%), Query Frame = 0 Query: 101 EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASA--PLLVRLLRTMLGP--APDDVPRALGGLLSLSD-------WQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRA 287 + + Q + A H L ++ S VA + + G+ FLL L+V+NDI AY+ G G+TPL KLSPKK+WEGF GA+V T+ SA L L GP P+ P L G L + W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ P++ Sbjct: 170 KMYKYQFSQYAWTHMILIVVFAQSSFTVASIFE-GIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVDLATGWLHCDPGPLFKPESFP--LPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQS 364
BLAST of EWM27032.1 vs. NCBI_GenBank
Match: gi|567915073|ref|XP_006449850.1| (hypothetical protein CICLE_v10015379mg [Citrus clementina] >gi|557552461|gb|ESR63090.1| hypothetical protein CICLE_v10015379mg [Citrus clementina]) HSP 1 Score: 136.346 bits (342), Expect = 1.960e-34 Identity = 85/212 (40.09%), Postives = 114/212 (53.77%), Query Frame = 0 Query: 101 EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVNDIGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLL---------RTMLG-------PAPDDVPRA--LGGLLSLSD-------WQALILAAFASFGAPIGGILASAAKRATGTKDFGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRA 287 + + Q + A H L ++ S VA + + G+ FLL L+V+NDI AY+ G G+TPL KLSPKK+WEGF GA+V T+ SA +L ++ R L P P P + L G L + W AL L FAS AP GG AS KRA KDFGDSIPGHGG+ DR+DCQ+ M+ F+Y++ P++ Sbjct: 66 KMYKYQFSQYAWTHMILIVVFAQSSFTVASIFE-GIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASVATITSAFVLANIMGRFQWLTCPRKDLATGWLHCDPGPLFKPESFPLPGWLPWKEITILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVPQS 276 The following BLAST results are available for this feature:
BLAST of EWM27032.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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