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Properties
| Property Name | Value |
|---|
| Product | phosphatidate cytidylyltransferase |
| Orig transcript id | gnl|cribi|Naga_100056g35.10445.mrna |
| Orig protein id | gnl|cribi|Naga_100056g35.10445 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:831596..832465 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3623 ID=rna3623|Name=rna3623|organism=Nannochloropsis gaditana|type=mRNA|length=1924bp
CGGTCCAATAGCTTGGCCACCTCATTGTAAGCACCAGCTTGAGCGCCGAT
CACAATCAGCTCCAGGCCTTTTCGCTGACCGACGTAGGTCATGGCAGCAG
TCAGCCCCAAAAGCGTCACCGTGCTGGCGACGCGCGTGCCCCAAGAACCC
TTCCGACTTGAGATACGACCCAGGACGCCGGGGTCCTGAGGAGGTGCTCT
CAAGGCGTTCGACGGGGCGCCAAACAAGGCCCCGCCTCGGTGAAGGAGAT
CTTTGTGGGGAGAAACTTTCAATGGAGAGGGTGCGACGAGGCACAGGAAG
GAAAGGGAAAGGATTAACTGGCATATCACCCGCCCCGCCATTCCACCTGT
CCGTTTGCGGTGGTAGTCTTGTGAGCCTAGAAAAGTTGTCACGCATCAAA
AAGAGCTTCTCAGTTTTTTTGGAAAGTGTTCAAGAACGTGACAGCATTAT
TCGATCGAAAGCATGACGAGGACACACGATGGTCACCTAGCCGGTGATCA
AACGACACACGCCGGTCGTGGAGGAGGCAGGAGGTTGGACTACCTGTTGC
CAACCTTGCGCCCTGCTATGCGATTGTTGAGCCACGGGCATGATCGATGG
GGGTATTCATGACCGCTTATACTTTGCTTGAATGCCCAGGCGTTGAAGAC
GGAAAAGATGACGGACAACCACCAATGATGGTGAATGGCATTACGATCTC
TTTGTCTTATCGCCCATGTTGAGCGCTGCTGATATTCAATACGTTGCATA
TATCGTACCTCAATACCCAAGGCGTTCATATTTAAAAACACAGGGCATGC
GGGATAGAACAATCTTCTCTTTGGTCCCGTGTCTTTTTTCATCTGCTACC
GCCGCAGTTGCTGTTATTTCTGCTGCCTCCGCTGTTTCTGCCTGTGGAAG
CTCCGTGGCCCTTTTCCACAACAAAGCGTCACCACGGCAGTCTTTCGTGT
ATTACAGTCCTTTGCCGACCAAAAGTACCTTTGCCACGACGTTGAAAGCA
GAAAGAAGAATGAAAGCAAGCTCTAGTGTCCCTCAGCCGACTTTAAAGAC
CAAGCTTTTGACCTTGCTCTTCGTGAGGCGGGCAAACCCAACAACGAATG
TCAAAGAAGTACTCCTCGGAATGAAAAAGAGAGGATTCGGGCAAGGAAAA
TGGAATGGTTTTGGAGGCAAGGTGGAGACTAATGAGACGATTAAAGCGGC
TGCTTTGCGTGAGCTGGAGGAGGAATCATGCTTGAAGGCCTCGGATGCAG
AACTGAGGGGAAAAATCACCTTCACATTTTTGACCATTCCCGAGGTGCTG
AAGGTCCACGTTTTTGAGGCACTGGGCCCGATCGAAGGGGAGCCTCAGGA
GACAGAAGAAATGAAACCACAATGGTACGCCGAAAGCGAGATCCCGTATG
AGAAAATGTGGGCGGACGATAAATATTGGTTGCCCTTGTTCCTCGAAGGG
AGGCGGTTCAAGGCTCTCTTTGAGTTCGACGACGAAAGCACTTTGTTACG
GTACGATCTAGGTACGGTGCCTGAAGGAGAGGAGTTGTGACAATGAGGTT
GGTGGAGACAGCAGAGTGGAGCACGGTAGGAGTAGTACTTATGCCTGGCA
TGTGGAAGAGCAACGGTGTGGAACGGGCGCGTGGGGCAACTCCCCTAATG
GGACCACGCACTCCGAAAGAGCGATGATAAAATAAAATGTTTCGAGTCAT
CGAGGTACACATGCGGCCCCTGGCTCGAGGGGAGTCTTACAGGAAGCAAG
CGTTGATGAGGCCGGGGCCCTGTGTGGGAAGTTCCGGGAGTCTTGTCCCC
CTTTGATTTGATTGCGACCGCCACCCCTATCTTTAGCATGCCTTCTGCCT
CACACTTATCCTTCATGCTTGTAAATGCGACAGATGCACCAATGGGGCGG
GCCCTCTCTGCCCCCCTGTAGCCT back to topprotein sequence of rna3623 >rna3623-protein ID=rna3623-protein|Name=rna3623|organism=Nannochloropsis gaditana|type=polypeptide|length=289bp
MTYVGQRKGLELIVIGAQAGAYNEVAKLLDRGLSLPSSLPSRWLWFVLAF
NTGHSWAYGETLMPSLLPSWLHWYWPGRRLVQYLAYVCLLGGSITPKGPG
EQLQRQVAHLAGLHFALFLIVGLGSGYVAILKQWGVRPFLLSVLLVVVND
IGAYLVGVPLGKTPLTKLSPKKSWEGFWGAAVLTMASAPLLVRLLRTMLG
PAPDDVPRALGGLLSLSDWQALILAAFASFGAPIGGILASAAKRATGTKD
FGDSIPGHGGVMDRVDCQLFMSAFSYLFLSCSASPRARE back to topmRNA from alignment at CM002461.1:831596..832465+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3623 ID=rna3623|Name=rna3623|organism=Nannochloropsis gaditana|type=mRNA|length=870bp|location=Sequence derived from alignment at CM002461.1:831596..832465+ (Nannochloropsis gaditana)
ATGACCTACGTCGGTCAGCGAAAAGGCCTGGAGCTGATTGTGATCGGCGC
TCAAGCTGGTGCTTACAATGAGGTGGCCAAGCTATTGGACCGAGGACTGa
gcctcccgtcctccctgccgtccCGATGGTTGTGGTTCGTCCTCGCTTTC
AACACCGGCCACTCCTGGGCCTACGGCGAGACTCTCATGCCCTCTCTACT
CCCATCCTGGCTGCATTGGTACTGGCCGGGGCGTCGGCTTGTGCAGTATC
TTGCCTACGTCTGCCTGCTCGGAGGGTCCATCACACCCAAGGGCCCAGGG
GAGCAGCTTCAGCGCCAAGTCGCGCATCTGGCCGGTCTGCATTTCGCGCT
CTTTCTCATTGTGGGACTGGGCTCCGGGTACGTGGCCATCCTCAAACAAT
GGGGcgtccgccctttcctcctttccgtcctcctggTCGTTGTGAACGAC
ATCGGGGCCTACCTGGTGGGAGTGCCCCTGGGGAAGACCCCTCTGACTAA
GCTCTCCCCCAAGAAGAGCTGGGAGGGCTTCTGGGGGGCTGCAGTTCTGA
CCATGGCCAGTGCTCCGCTCCTCGTACGGCTCCTTCGAACCATGTTGGGG
CCCGCGCCCGACGACGTGCCCCGCGCGTTGGGGGGGCTGCTGTCCCTCTC
GGACTGGCAGGCGCTGATCCTGGCTGCCTTCGCCTCGTTCGGGGCACCTA
TAGGGGGCATTCTGGCATCCGCCGCCAAGCGGGCGACGGGGACGAAGGAT
TTCGGCGACAGCATACCCGGACACGGCGGGGTCATGGACCGTGTGGACTG
CCAGCTCTTCATGTCGGCCTTCAGCTACCTCTTCTTGTCTTGCTCCGCTT
CTCCCCGGGCGCGGGAATAG back to topCoding sequence (CDS) from alignment at CM002461.1:831596..832465+ >rna3623 ID=rna3623|Name=rna3623|organism=Nannochloropsis gaditana|type=CDS|length=870bp|location=Sequence derived from alignment at CM002461.1:831596..832465+ (Nannochloropsis gaditana)
ATGACCTACGTCGGTCAGCGAAAAGGCCTGGAGCTGATTGTGATCGGCGC
TCAAGCTGGTGCTTACAATGAGGTGGCCAAGCTATTGGACCGAGGACTGa
gcctcccgtcctccctgccgtccCGATGGTTGTGGTTCGTCCTCGCTTTC
AACACCGGCCACTCCTGGGCCTACGGCGAGACTCTCATGCCCTCTCTACT
CCCATCCTGGCTGCATTGGTACTGGCCGGGGCGTCGGCTTGTGCAGTATC
TTGCCTACGTCTGCCTGCTCGGAGGGTCCATCACACCCAAGGGCCCAGGG
GAGCAGCTTCAGCGCCAAGTCGCGCATCTGGCCGGTCTGCATTTCGCGCT
CTTTCTCATTGTGGGACTGGGCTCCGGGTACGTGGCCATCCTCAAACAAT
GGGGcgtccgccctttcctcctttccgtcctcctggTCGTTGTGAACGAC
ATCGGGGCCTACCTGGTGGGAGTGCCCCTGGGGAAGACCCCTCTGACTAA
GCTCTCCCCCAAGAAGAGCTGGGAGGGCTTCTGGGGGGCTGCAGTTCTGA
CCATGGCCAGTGCTCCGCTCCTCGTACGGCTCCTTCGAACCATGTTGGGG
CCCGCGCCCGACGACGTGCCCCGCGCGTTGGGGGGGCTGCTGTCCCTCTC
GGACTGGCAGGCGCTGATCCTGGCTGCCTTCGCCTCGTTCGGGGCACCTA
TAGGGGGCATTCTGGCATCCGCCGCCAAGCGGGCGACGGGGACGAAGGAT
TTCGGCGACAGCATACCCGGACACGGCGGGGTCATGGACCGTGTGGACTG
CCAGCTCTTCATGTCGGCCTTCAGCTACCTCTTCTTGTCTTGCTCCGCTT
CTCCCCGGGCGCGGGAATAG back to top
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