EWM27048.1, cds3608 (CDS) Nannochloropsis gaditana

Overview
NameEWM27048.1
Unique Namecds3608
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:821140..821145 -
Alignment locationCM002461.1:820155..821035 -
Alignment locationCM002461.1:819713..820052 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27048.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100056g41.10461.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:821140..821145 -
CM002461.1supercontigCM002461.1:820155..821035 -
CM002461.1supercontigCM002461.1:819713..820052 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
GO:0016020membrane
GO:0009507chloroplast
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0006464cellular protein modification process
GO:0006091generation of precursor metabolites and energy
Homology
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|585109222|gb|EWM27048.1| (hypothetical protein Naga_100056g41 [Nannochloropsis gaditana])

HSP 1 Score: 816.609 bits (2108), Expect = 0.000e+0
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM 408
            MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM
Sbjct:    1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM 408          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|553177801|ref|XP_005852499.1| (light harvesting complex protein, partial [Nannochloropsis gaditana CCMP526] >gi|422296033|gb|EKU23332.1| light harvesting complex protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0
Identity = 382/404 (94.55%), Postives = 383/404 (94.80%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA 404
            MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGF     +                LLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA
Sbjct:   35 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFRCDLAD----------------LLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA 422          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|299470536|emb|CBN78524.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 169.474 bits (428), Expect = 1.081e-44
Identity = 146/433 (33.72%), Postives = 208/433 (48.04%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLP-QRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAV----APV--AQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVM-------PTHTVGSVFGFYLQLLSRW-RTTVNVSYVGAPDLLLQPTSA--KGSGGSSR---------TPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREK 407
            MEKF+KWAD+ +G+NPF+P   R+  SL   V   LL + L  VR+P+ L  L        L++ +  +L  A +     ++   S  +  +       LLV     A       VF    +R P+ L LS++G+   E+HA+LR+LGLR P   P   R G  I  GDI++ N    LEVL+  SR  P F+A+A     APV   + R ++ +   +R    PP A      Q L  +    + + +++VV PE AR+NG GVL   R V D         G  +G      V++  F ++              P   VGS       L S+  RTT+ VS+V A D+   P  A  + S   SR         TP   +EE+RSL+A M+GRPKL LG +DF +F  YY  +  GD+  AAALA +R K
Sbjct:    1 MEKFSKWADRSSGVNPFVPFPPRSPKSLCLLVPVYLLRLCLALVRMPVALSLLMTASVGGALSR-YLPVLM-AFWAAERAMNGFSSDQVWSTRFLLAIPLLVFAQFGA------SVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPAAEPPSGRPGGGIYRGDIIVRNSCCFLEVLYLQSRVTPQFTAIAAGGGSAPVNLTRIRFVSAVLGSFRG---PPAAGALKKEQTLRDIVTAPRGRTRSIVVAPEAARTNGAGVLQLSR-VFDSL--AHPPSGDTSGYVAQPAVHLVTFSYNRGGRGDGGGRGGFSPAQPVGSALRQLFWLCSQLSRTTMEVSWVAAADVPRFPMRAISRISSDPSRKFPGPSQLQTPAAWTEEIRSLMAAMIGRPKLALGSKDFATFVAYYDLVSKGDKAGAAALADSRSK 419          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|1214687930|gb|OWZ04045.1| (hypothetical protein PHMEG_00024124 [Phytophthora megakarya])

HSP 1 Score: 116.316 bits (290), Expect = 1.886e-25
Identity = 116/412 (28.16%), Postives = 172/412 (41.75%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PT------SAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++WAD  TGINPF+PQRR  +S  P  +   +   VL  +R PL+L+     +AL L+                                       V+ S+ A+   + R    LT      L++ + GV   E+ AN R+LGL     +   S+    +  GD+++ N+TS LE+L+   RF P F   A      G L+     L+A +R+  +P         + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+  F        P+H+ G  +            T+ V+ + A DL L    PT      S+K    S        E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWADLTTGINPFVPQRRRFTSGWPVTILQAVSGSVLALLRFPLVLVCT---VALVLIN--------------------------------------VVVSIVAVIPFLGRFLKRLTEWLLCSLIILLFGVFTSEEGANTRRLGLATA--KTKSSKGSTRVAPGDVVVCNYTSFLEILYLAKRFSPVFVFAAEGKSNDGGLVHVCGLLEALYRSLAMPVSVERVKPTRKIADVV---RRASGPVVVLPEGARSNGKAVLKFI-PVLQNLPVK---------------TRVHLVAFRYEFKHFSPSHSAGGAWSHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSNKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWKHVNSGGRQPAS 350          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|567980628|gb|ETL31083.1| (hypothetical protein L916_16006 [Phytophthora parasitica])

HSP 1 Score: 111.694 bits (278), Expect = 8.222e-24
Identity = 118/414 (28.50%), Postives = 178/414 (43.00%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++W+D  TGINPF+PQRR  +S  P  +   +    L  VR PL+LL+   F+AL                                      F + ++ S+ A+   + R+   +T      L+L + GV   E+ AN R+LGL     R  +  +R+G    +GD+L+ N+TS LE+L+   RF P F     +    G L+     L+A +R+  +P  A      + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+ GF        P+ + G  +            T+ V+ + A DL L    PT    S  S +     +      E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKIADVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPVK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|570972520|gb|ETP35349.1| (hypothetical protein F442_16420 [Phytophthora parasitica P10297])

HSP 1 Score: 110.923 bits (276), Expect = 1.348e-23
Identity = 118/414 (28.50%), Postives = 179/414 (43.24%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++W+D  TGINPF+PQRR  +S  P  +   +    L  VR PL+L++   F+AL L+T                                      ++ S+ A+   + R+   +T      L+L + GV   E+ AN R+LGL     R  +  +R+G    +GD+L+ N+TS LE+L+   RF P F     +    G L+     L+A +R+  +P  A      + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+ GF        P+ + G  +            T+ V+ + A DL L    PT    S  S +     +      E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVS---FVALFLVT--------------------------------------IVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPIK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|568010146|gb|ETL84336.1| (hypothetical protein L917_15802 [Phytophthora parasitica])

HSP 1 Score: 110.923 bits (276), Expect = 1.579e-23
Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++W+D  TGINPF+PQRR  +S  P  +   +    L  VR PL+L++   F+AL                                      F + ++ S+ A+   + R+   +T      L+L + GV   E+ AN R+LGL     R  +  +R+G    +GD+L+ N+TS LE+L+   RF P F     +    G L+     L+A +R+  +P  A      + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+ GF        P+ + G  +            T+ V+ + A DL L    PT    S  S +     +      E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPVK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|570942010|gb|ETP07267.1| (hypothetical protein F441_16406 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 110.923 bits (276), Expect = 1.627e-23
Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++W+D  TGINPF+PQRR  +S  P  +   +    L  VR PL+LL+   F+AL                                      F + ++ S+ A+   + R+   +T      L+L + GV   E+ AN R+LGL     R  +  +R+G    +GD+L+ N+TS LE+++   RF P F     +    G L+     L+A +R+  +P  A      + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+ GF        P+ + G  +            T+ V+ + A DL L    PT    S  S +     +      E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEIMYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKIADVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPVK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|567951953|gb|ETK77638.1| (hypothetical protein L915_16110 [Phytophthora parasitica] >gi|570318244|gb|ETO66192.1| hypothetical protein F444_16554 [Phytophthora parasitica P1976])

HSP 1 Score: 110.538 bits (275), Expect = 1.982e-23
Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++W+D  TGINPF+PQRR  +S  P  +   +    L  VR PL+LL+   F+AL                                      F + ++ S+ A+   + R+   +T      L+L + GV   E+ AN R+LGL     R  +  +R+G    +GD+L+ N+TS LE+++   RF P F     +    G L+     L+A +R+  +P  A      + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+ GF        P+ + G  +            T+ V+ + A DL L    PT    S  S +     +      E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEIMYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPIK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350          
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|675205807|ref|XP_008911788.1| (hypothetical protein PPTG_15791 [Phytophthora parasitica INRA-310] >gi|566014508|gb|ETI37419.1| hypothetical protein F443_16579 [Phytophthora parasitica P1569] >gi|568040045|gb|ETM37512.1| hypothetical protein L914_15932 [Phytophthora parasitica] >gi|568087967|gb|ETN02831.1| hypothetical protein PPTG_15791 [Phytophthora parasitica INRA-310])

HSP 1 Score: 110.153 bits (274), Expect = 2.856e-23
Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query:    1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
            MEK+++W+D  TGINPF+PQRR  +S  P  +   +    L  VR PL+L++   F+AL                                      F + ++ S+ A+   + R+   +T      L+L + GV   E+ AN R+LGL     R  +  +R+G    +GD+L+ N+TS LE+L+   RF P F     +    G L+     L+A +R+  +P  A      + ++ +    +R    VVV PE ARSNG  VL F   VL     K                 VH+ GF        P+ + G  +            T+ V+ + A DL L    PT    S  S +     +      E+LRSLLA ML    ++LG EDF SF  Y+  + +G  + A+
Sbjct:    1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPIK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350          
The following BLAST results are available for this feature:
BLAST of EWM27048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109222|gb|EWM27048.1|0.000e+0100.00hypothetical protein Naga_100056g41 [Nannochlorops... [more]
gi|553177801|ref|XP_005852499.1|0.000e+094.55light harvesting complex protein, partial [Nannoch... [more]
gi|299470536|emb|CBN78524.1|1.081e-4433.72conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214687930|gb|OWZ04045.1|1.886e-2528.16hypothetical protein PHMEG_00024124 [Phytophthora ... [more]
gi|567980628|gb|ETL31083.1|8.222e-2428.50hypothetical protein L916_16006 [Phytophthora para... [more]
gi|570972520|gb|ETP35349.1|1.348e-2328.50hypothetical protein F442_16420 [Phytophthora para... [more]
gi|568010146|gb|ETL84336.1|1.579e-2328.26hypothetical protein L917_15802 [Phytophthora para... [more]
gi|570942010|gb|ETP07267.1|1.627e-2328.26hypothetical protein F441_16406 [Phytophthora para... [more]
gi|567951953|gb|ETK77638.1|1.982e-2328.26hypothetical protein L915_16110 [Phytophthora para... [more]
gi|675205807|ref|XP_008911788.1|2.856e-2328.26hypothetical protein PPTG_15791 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3617rna3617Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications