EWM27048.1, cds3608 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|585109222|gb|EWM27048.1| (hypothetical protein Naga_100056g41 [Nannochloropsis gaditana]) HSP 1 Score: 816.609 bits (2108), Expect = 0.000e+0 Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM 408
MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM
Sbjct: 1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREKM 408
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|553177801|ref|XP_005852499.1| (light harvesting complex protein, partial [Nannochloropsis gaditana CCMP526] >gi|422296033|gb|EKU23332.1| light harvesting complex protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 754.592 bits (1947), Expect = 0.000e+0 Identity = 382/404 (94.55%), Postives = 383/404 (94.80%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA 404
MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGF + LLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA
Sbjct: 35 MEKFTKWADKGTGINPFLPQRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFRCDLAD----------------LLSRWRTTVNVSYVGAPDLLLQPTSAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARA 422
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|299470536|emb|CBN78524.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 169.474 bits (428), Expect = 1.081e-44 Identity = 146/433 (33.72%), Postives = 208/433 (48.04%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLP-QRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAV----APV--AQGRLLTPLQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVM-------PTHTVGSVFGFYLQLLSRW-RTTVNVSYVGAPDLLLQPTSA--KGSGGSSR---------TPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAAALARAREK 407
MEKF+KWAD+ +G+NPF+P R+ SL V LL + L VR+P+ L L L++ + +L A + ++ S + + LLV A VF +R P+ L LS++G+ E+HA+LR+LGLR P P R G I GDI++ N LEVL+ SR P F+A+A APV + R ++ + +R PP A Q L + + + +++VV PE AR+NG GVL R V D G +G V++ F ++ P VGS L S+ RTT+ VS+V A D+ P A + S SR TP +EE+RSL+A M+GRPKL LG +DF +F YY + GD+ AAALA +R K
Sbjct: 1 MEKFSKWADRSSGVNPFVPFPPRSPKSLCLLVPVYLLRLCLALVRMPVALSLLMTASVGGALSR-YLPVLM-AFWAAERAMNGFSSDQVWSTRFLLAIPLLVFAQFGA------SVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPAAEPPSGRPGGGIYRGDIIVRNSCCFLEVLYLQSRVTPQFTAIAAGGGSAPVNLTRIRFVSAVLGSFRG---PPAAGALKKEQTLRDIVTAPRGRTRSIVVAPEAARTNGAGVLQLSR-VFDSL--AHPPSGDTSGYVAQPAVHLVTFSYNRGGRGDGGGRGGFSPAQPVGSALRQLFWLCSQLSRTTMEVSWVAAADVPRFPMRAISRISSDPSRKFPGPSQLQTPAAWTEEIRSLMAAMIGRPKLALGSKDFATFVAYYDLVSKGDKAGAAALADSRSK 419
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|1214687930|gb|OWZ04045.1| (hypothetical protein PHMEG_00024124 [Phytophthora megakarya]) HSP 1 Score: 116.316 bits (290), Expect = 1.886e-25 Identity = 116/412 (28.16%), Postives = 172/412 (41.75%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PT------SAKGSGGSSRTPVYSSEELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++WAD TGINPF+PQRR +S P + + VL +R PL+L+ +AL L+ V+ S+ A+ + R LT L++ + GV E+ AN R+LGL + S+ + GD+++ N+TS LE+L+ RF P F A G L+ L+A +R+ +P + ++ + +R VVV PE ARSNG VL F VL K VH+ F P+H+ G + T+ V+ + A DL L PT S+K S E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWADLTTGINPFVPQRRRFTSGWPVTILQAVSGSVLALLRFPLVLVCT---VALVLIN--------------------------------------VVVSIVAVIPFLGRFLKRLTEWLLCSLIILLFGVFTSEEGANTRRLGLATA--KTKSSKGSTRVAPGDVVVCNYTSFLEILYLAKRFSPVFVFAAEGKSNDGGLVHVCGLLEALYRSLAMPVSVERVKPTRKIADVV---RRASGPVVVLPEGARSNGKAVLKFI-PVLQNLPVK---------------TRVHLVAFRYEFKHFSPSHSAGGAWSHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSNKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWKHVNSGGRQPAS 350
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|567980628|gb|ETL31083.1| (hypothetical protein L916_16006 [Phytophthora parasitica]) HSP 1 Score: 111.694 bits (278), Expect = 8.222e-24 Identity = 118/414 (28.50%), Postives = 178/414 (43.00%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++W+D TGINPF+PQRR +S P + + L VR PL+LL+ F+AL F + ++ S+ A+ + R+ +T L+L + GV E+ AN R+LGL R + +R+G +GD+L+ N+TS LE+L+ RF P F + G L+ L+A +R+ +P A + ++ + +R VVV PE ARSNG VL F VL K VH+ GF P+ + G + T+ V+ + A DL L PT S S + + E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKIADVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPVK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|570972520|gb|ETP35349.1| (hypothetical protein F442_16420 [Phytophthora parasitica P10297]) HSP 1 Score: 110.923 bits (276), Expect = 1.348e-23 Identity = 118/414 (28.50%), Postives = 179/414 (43.24%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++W+D TGINPF+PQRR +S P + + L VR PL+L++ F+AL L+T ++ S+ A+ + R+ +T L+L + GV E+ AN R+LGL R + +R+G +GD+L+ N+TS LE+L+ RF P F + G L+ L+A +R+ +P A + ++ + +R VVV PE ARSNG VL F VL K VH+ GF P+ + G + T+ V+ + A DL L PT S S + + E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVS---FVALFLVT--------------------------------------IVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPIK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|568010146|gb|ETL84336.1| (hypothetical protein L917_15802 [Phytophthora parasitica]) HSP 1 Score: 110.923 bits (276), Expect = 1.579e-23 Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++W+D TGINPF+PQRR +S P + + L VR PL+L++ F+AL F + ++ S+ A+ + R+ +T L+L + GV E+ AN R+LGL R + +R+G +GD+L+ N+TS LE+L+ RF P F + G L+ L+A +R+ +P A + ++ + +R VVV PE ARSNG VL F VL K VH+ GF P+ + G + T+ V+ + A DL L PT S S + + E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPVK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVTVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|570942010|gb|ETP07267.1| (hypothetical protein F441_16406 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 110.923 bits (276), Expect = 1.627e-23 Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++W+D TGINPF+PQRR +S P + + L VR PL+LL+ F+AL F + ++ S+ A+ + R+ +T L+L + GV E+ AN R+LGL R + +R+G +GD+L+ N+TS LE+++ RF P F + G L+ L+A +R+ +P A + ++ + +R VVV PE ARSNG VL F VL K VH+ GF P+ + G + T+ V+ + A DL L PT S S + + E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEIMYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKIADVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPVK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|567951953|gb|ETK77638.1| (hypothetical protein L915_16110 [Phytophthora parasitica] >gi|570318244|gb|ETO66192.1| hypothetical protein F444_16554 [Phytophthora parasitica P1976]) HSP 1 Score: 110.538 bits (275), Expect = 1.982e-23 Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++W+D TGINPF+PQRR +S P + + L VR PL+LL+ F+AL F + ++ S+ A+ + R+ +T L+L + GV E+ AN R+LGL R + +R+G +GD+L+ N+TS LE+++ RF P F + G L+ L+A +R+ +P A + ++ + +R VVV PE ARSNG VL F VL K VH+ GF P+ + G + T+ V+ + A DL L PT S S + + E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLLS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEIMYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPIK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350
BLAST of EWM27048.1 vs. NCBI_GenBank
Match: gi|675205807|ref|XP_008911788.1| (hypothetical protein PPTG_15791 [Phytophthora parasitica INRA-310] >gi|566014508|gb|ETI37419.1| hypothetical protein F443_16579 [Phytophthora parasitica P1569] >gi|568040045|gb|ETM37512.1| hypothetical protein L914_15932 [Phytophthora parasitica] >gi|568087967|gb|ETN02831.1| hypothetical protein PPTG_15791 [Phytophthora parasitica INRA-310]) HSP 1 Score: 110.153 bits (274), Expect = 2.856e-23 Identity = 117/414 (28.26%), Postives = 178/414 (43.00%), Query Frame = 0
Query: 1 MEKFTKWADKGTGINPFLPQRRAASS-LPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLLTKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGFFLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHD--SRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAVAPVAQGRLLTP---LQAWWRAGLVPPKAFETGTGQALSSLAAEAKRQGQAVVVFPETARSNGDGVLVFQRGVLDGTDAKEAKGGKLTGGERGGGVNVHIFGFSAPKGEVMPTHTVGSVFGFYLQLLSRWRTTVNVSYVGAPDLLLQ---PTSAKGSGGSSRTPVYSS------EELRSLLANMLGRPKLNLGYEDFCSFRKYYAAIRAGDEERAA 399
MEK+++W+D TGINPF+PQRR +S P + + L VR PL+L++ F+AL F + ++ S+ A+ + R+ +T L+L + GV E+ AN R+LGL R + +R+G +GD+L+ N+TS LE+L+ RF P F + G L+ L+A +R+ +P A + ++ + +R VVV PE ARSNG VL F VL K VH+ GF P+ + G + T+ V+ + A DL L PT S S + + E+LRSLLA ML ++LG EDF SF Y+ + +G + A+
Sbjct: 1 MEKYSRWSDLTTGINPFVPQRRRFTSGWPVTILQVVAGSTLALVRFPLVLVS---FVAL--------------------------------------FLVNIVVSILAVIPFLGRLLKRITQWLLCSLILLLFGVFTSEESANTRRLGLATAKSRSSNGSTRVG----SGDVLVCNYTSFLEILYLAKRFSPVFVFATESKSNDGGLVHVCGLLEALYRSLAMPVSAERVKPTRKITDVV---RRAAGPVVVLPEGARSNGKAVLRFI-PVLQNLPIK---------------TRVHLVGFRYEFKRFSPSQSAGGAWAHLFWTAFHLYHTMRVAVLSAKDLNLDDLTPTKLPSSKSSKKQENSKTLSTDQVEKLRSLLAAMLRTKTVDLGPEDFVSFNNYWQHVNSGGRQPAS 350 The following BLAST results are available for this feature:
BLAST of EWM27048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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